RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
LINC00649-217ENST00000616030 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.11
LINC00649-217ENST00000616030 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
LINC00649-217ENST00000616030 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
LINC00649-217ENST00000616030 CLTCL1P53675 1640 aa15.71■□□□□ 0.11
LINC00649-217ENST00000616030 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
LINC00649-217ENST00000616030 NKTRP30414 1462 aaKnown RBP15.7■□□□□ 0.1
LINC00649-217ENST00000616030 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
LINC00649-217ENST00000616030 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
LINC00649-217ENST00000616030 CHD2O14647 1828 aaKnown RBP15.66■□□□□ 0.1
LINC00649-217ENST00000616030 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.66■□□□□ 0.1
LINC00649-217ENST00000616030 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
LINC00649-217ENST00000616030 NEXMIFQ5QGS0 1516 aa15.65■□□□□ 0.1
LINC00649-217ENST00000616030 HDGFP51858 240 aaKnown RBP15.65■□□□□ 0.1
LINC00649-217ENST00000616030 KIF1BO60333 1816 aa15.65■□□□□ 0.1
LINC00649-217ENST00000616030 ADAMTS13Q76LX8 1427 aa15.65■□□□□ 0.1
LINC00649-217ENST00000616030 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
LINC00649-217ENST00000616030 KCNA6P17658 529 aa15.63■□□□□ 0.09
LINC00649-217ENST00000616030 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
LINC00649-217ENST00000616030 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
LINC00649-217ENST00000616030 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
LINC00649-217ENST00000616030 TOM1O60784 492 aa15.6■□□□□ 0.09
LINC00649-217ENST00000616030 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
LINC00649-217ENST00000616030 XRN1Q8IZH2 1706 aaKnown RBP15.59■□□□□ 0.09
LINC00649-217ENST00000616030 SLC26A8Q96RN1 970 aa15.58■□□□□ 0.08
LINC00649-217ENST00000616030 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
LINC00649-217ENST00000616030 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
LINC00649-217ENST00000616030 PPLO60437 1756 aa15.57■□□□□ 0.08
LINC00649-217ENST00000616030 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
LINC00649-217ENST00000616030 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
LINC00649-217ENST00000616030 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
LINC00649-217ENST00000616030 TMEM94Q12767 1356 aa15.56■□□□□ 0.08
LINC00649-217ENST00000616030 IFT172Q9UG01 1749 aa15.55■□□□□ 0.08
LINC00649-217ENST00000616030 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
LINC00649-217ENST00000616030 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
LINC00649-217ENST00000616030 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
LINC00649-217ENST00000616030 PTPRUQ92729 1446 aa15.53■□□□□ 0.08
LINC00649-217ENST00000616030 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
LINC00649-217ENST00000616030 RPGRIP1LQ68CZ1 1315 aa15.53■□□□□ 0.08
LINC00649-217ENST00000616030 CCDC144AA2RUR9 1427 aa15.52■□□□□ 0.08
LINC00649-217ENST00000616030 FAM135BQ49AJ0 1406 aa15.52■□□□□ 0.08
LINC00649-217ENST00000616030 HRCP23327 699 aa15.52■□□□□ 0.08
LINC00649-217ENST00000616030 MPHOSPH9Q99550 1183 aa15.52■□□□□ 0.08
LINC00649-217ENST00000616030 DCCP43146 1447 aa15.5■□□□□ 0.07
LINC00649-217ENST00000616030 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
LINC00649-217ENST00000616030 PTCH1Q13635 1447 aa15.48■□□□□ 0.07
LINC00649-217ENST00000616030 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
LINC00649-217ENST00000616030 METP08581 1390 aa15.48■□□□□ 0.07
LINC00649-217ENST00000616030 MSH6P52701 1360 aa15.48■□□□□ 0.07
LINC00649-217ENST00000616030 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
LINC00649-217ENST00000616030 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
LINC00649-217ENST00000616030 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
LINC00649-217ENST00000616030 ROBO1Q9Y6N7 1651 aa15.47■□□□□ 0.07
LINC00649-217ENST00000616030 HSPA1LP34931 641 aa15.46■□□□□ 0.07
LINC00649-217ENST00000616030 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
LINC00649-217ENST00000616030 BCANQ96GW7 911 aa15.46■□□□□ 0.07
LINC00649-217ENST00000616030 ANKRD30BQ9BXX2 1392 aa15.46■□□□□ 0.07
LINC00649-217ENST00000616030 FOXD1Q16676 465 aa15.45■□□□□ 0.06
LINC00649-217ENST00000616030 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
LINC00649-217ENST00000616030 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
LINC00649-217ENST00000616030 MYOM2P54296 1465 aa15.44■□□□□ 0.06
LINC00649-217ENST00000616030 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
LINC00649-217ENST00000616030 NALCNQ8IZF0 1738 aa15.43■□□□□ 0.06
LINC00649-217ENST00000616030 MED1Q15648 1581 aaPredicted RBP15.42■□□□□ 0.06
LINC00649-217ENST00000616030 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
LINC00649-217ENST00000616030 LAMC1P11047 1609 aa15.42■□□□□ 0.06
LINC00649-217ENST00000616030 TECPR2O15040 1411 aa15.42■□□□□ 0.06
LINC00649-217ENST00000616030 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
LINC00649-217ENST00000616030 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
LINC00649-217ENST00000616030 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
LINC00649-217ENST00000616030 AHDC1Q5TGY3 1603 aaPredicted RBP15.4■□□□□ 0.06
LINC00649-217ENST00000616030 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
LINC00649-217ENST00000616030 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
LINC00649-217ENST00000616030 CADPS2Q86UW7 1296 aa15.38■□□□□ 0.05
LINC00649-217ENST00000616030 SLAIN2Q9P270 581 aa15.38■□□□□ 0.05
LINC00649-217ENST00000616030 COL16A1Q07092 1604 aaPredicted RBP15.38■□□□□ 0.05
LINC00649-217ENST00000616030 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
LINC00649-217ENST00000616030 MST1RQ04912 1400 aa15.36■□□□□ 0.05
LINC00649-217ENST00000616030 PHLPP1O60346 1717 aa15.36■□□□□ 0.05
LINC00649-217ENST00000616030 ROBO2Q9HCK4 1378 aa15.36■□□□□ 0.05
LINC00649-217ENST00000616030 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
LINC00649-217ENST00000616030 CDC42BPGQ6DT37 1551 aa15.35■□□□□ 0.05
LINC00649-217ENST00000616030 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
LINC00649-217ENST00000616030 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
LINC00649-217ENST00000616030 ABCC11Q96J66 1382 aa15.33■□□□□ 0.04
LINC00649-217ENST00000616030 ATF3P18847 181 aa15.32■□□□□ 0.04
LINC00649-217ENST00000616030 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
LINC00649-217ENST00000616030 RGL3Q3MIN7 710 aa15.31■□□□□ 0.04
LINC00649-217ENST00000616030 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
LINC00649-217ENST00000616030 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
LINC00649-217ENST00000616030 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
LINC00649-217ENST00000616030 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
LINC00649-217ENST00000616030 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
LINC00649-217ENST00000616030 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
LINC00649-217ENST00000616030 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
LINC00649-217ENST00000616030 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
LINC00649-217ENST00000616030 SIRT1Q96EB6 747 aa15.28■□□□□ 0.04
LINC00649-217ENST00000616030 JCADQ9P266 1359 aa15.27■□□□□ 0.04
LINC00649-217ENST00000616030 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
LINC00649-217ENST00000616030 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms