RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GSE1Q14687 1217 aa5.59□□□□□ -1.52
CHD9-221ENST00000615216 ANKRD45Q5TZF3 282 aa5.59□□□□□ -1.52
CHD9-221ENST00000615216 ST20-MTHFSA0A0A6YYL1 179 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 RNF20Q5VTR2 975 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 NOL10Q9BSC4 688 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 API5Q9BZZ5 524 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 PRKRIP1Q9H875 184 aaPredicted RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 PLEKHH2Q8IVE3 1493 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 BRD4O60885 1362 aaPredicted RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 MARCH6O60337 910 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 ZKSCAN1P17029 563 aaPredicted RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 TRIM29Q14134 588 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 HSP90AA2PQ14568 343 aaPredicted RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 WWC1Q8IX03 1113 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 CLUAP1Q96AJ1 413 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 BECN2A8MW95 431 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 RILPL2Q969X0 211 aa5.58□□□□□ -1.52
CHD9-221ENST00000615216 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 NOL8Q76FK4 1167 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD9-221ENST00000615216 DDX49Q9Y6V7 483 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 DDX58O95786 925 aaKnown RBP5.58□□□□□ -1.52
CHD9-221ENST00000615216 NCOA2Q15596 1464 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 CRBNQ96SW2 442 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.57□□□□□ -1.52
CHD9-221ENST00000615216 RUNDC1Q96C34 613 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 FOXD4L1Q9NU39 408 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 TIAM1Q13009 1591 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 HSP90AB4PQ58FF6 505 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 INTS3Q68E01 1043 aaKnown RBP5.57□□□□□ -1.52
CHD9-221ENST00000615216 TTC5Q8N0Z6 440 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 JPH4Q96JJ6 628 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 TOMM22Q9NS69 142 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 FRAT2O75474 233 aaPredicted RBP5.57□□□□□ -1.52
CHD9-221ENST00000615216 CCDC7Q96M83 1385 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 TRAK1Q9UPV9 953 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 NUCB2P80303 420 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 TEX35Q5T0J7 233 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
CHD9-221ENST00000615216 DZIP1LQ8IYY4 767 aaKnown RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 ANO2Q9NQ90 1003 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 ERC2O15083 957 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 IPO7O95373 1038 aaKnown RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 CREBRFQ8IUR6 639 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 C9orf78Q9NZ63 289 aaPredicted RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 SYNJ1O43426 1573 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 DIAPH1O60610 1272 aaKnown RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 RUSC2Q8N2Y8 1516 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 SYNJ2O15056 1496 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 IFIT2P09913 472 aaKnown RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 TCEAL9Q9UHQ7 104 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 RRP7AQ9Y3A4 280 aaKnown RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 GTF2E1P29083 439 aaPredicted RBP5.56□□□□□ -1.52
CHD9-221ENST00000615216 TEFQ10587 303 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 TRIM34Q9BYJ4 488 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 CHMP5Q9NZZ3 219 aa5.56□□□□□ -1.52
CHD9-221ENST00000615216 PES1O00541 588 aaKnown RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 MCTP1Q6DN14 999 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 CCDC9Q9Y3X0 531 aaKnown RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 KIF7Q2M1P5 1343 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 LETM1O95202 739 aaPredicted RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 GNAI1P63096 354 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 NAT10Q9H0A0 1025 aaKnown RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 ARID3AQ99856 593 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 HMGXB3Q12766 1538 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 LTV1Q96GA3 475 aaPredicted RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 GRIN2BQ13224 1484 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 ACBD3Q9H3P7 528 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 TRDNQ13061 729 aa5.55□□□□□ -1.52
CHD9-221ENST00000615216 FOXD4L5Q5VV16 416 aaPredicted RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
CHD9-221ENST00000615216 EXOC6Q8TAG9 804 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 SMG6Q86US8 1419 aaKnown RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 CPLX1O14810 134 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 ANKRD50Q9ULJ7 1429 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 KIF14Q15058 1648 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 G3BP1Q13283 466 aaKnown RBP eCLIP5.54□□□□□ -1.52
CHD9-221ENST00000615216 ERICH2A1L162 156 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 NCBP3Q53F19 620 aaKnown RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 CC2D2AQ9P2K1 1620 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 MTERF4Q7Z6M4 381 aaKnown RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 AK7Q96M32 723 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 PRM3Q9NNZ6 103 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 DNMBPQ6XZF7 1577 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 HFM1A2PYH4 1435 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 NUTM2DQ5VT03 806 aaPredicted RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 ARGLU1Q9NWB6 273 aaPredicted RBP5.54□□□□□ -1.52
CHD9-221ENST00000615216 CCDC39Q9UFE4 941 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 ITSN2Q9NZM3 1697 aa5.54□□□□□ -1.52
CHD9-221ENST00000615216 RIPK4P57078 832 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 ANO8Q9HCE9 1232 aaPredicted RBP5.53□□□□□ -1.52
CHD9-221ENST00000615216 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.53□□□□□ -1.52
CHD9-221ENST00000615216 CDC45O75419 566 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 PSMA5P28066 241 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 EVA1CP58658 441 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 DHX8Q14562 1220 aaKnown RBP5.53□□□□□ -1.52
CHD9-221ENST00000615216 SAFBQ15424 915 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD9-221ENST00000615216 SASS6Q6UVJ0 657 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms