RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SPHKAPQ2M3C7 1700 aa34.44■■■■□ 3.1
FAM228B-208ENST00000613899 XIRP1Q702N8 1843 aaKnown RBP34.42■■■■□ 3.1
FAM228B-208ENST00000613899 PLEKHG1Q9ULL1 1385 aa34.42■■■■□ 3.1
FAM228B-208ENST00000613899 PPP1R15AO75807 674 aaPredicted RBP34.41■■■■□ 3.1
FAM228B-208ENST00000613899 CHGAP10645 457 aaKnown RBP34.41■■■■□ 3.1
FAM228B-208ENST00000613899 SLC26A8Q96RN1 970 aa34.41■■■■□ 3.1
FAM228B-208ENST00000613899 DISP3Q9P2K9 1392 aa34.4■■■■□ 3.1
FAM228B-208ENST00000613899 NWD1Q149M9 1564 aa34.4■■■■□ 3.1
FAM228B-208ENST00000613899 BCANQ96GW7 911 aa34.39■■■■□ 3.1
FAM228B-208ENST00000613899 HFM1A2PYH4 1435 aa34.38■■■■□ 3.09
FAM228B-208ENST00000613899 KCNA6P17658 529 aa34.37■■■■□ 3.09
FAM228B-208ENST00000613899 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.37■■■■□ 3.09
FAM228B-208ENST00000613899 NKTRP30414 1462 aaKnown RBP34.36■■■■□ 3.09
FAM228B-208ENST00000613899 HSPA1LP34931 641 aa34.33■■■■□ 3.09
FAM228B-208ENST00000613899 TMEM94Q12767 1356 aa34.3■■■■□ 3.08
FAM228B-208ENST00000613899 DIP2AQ14689 1571 aa34.3■■■■□ 3.08
FAM228B-208ENST00000613899 CHD2O14647 1828 aaKnown RBP34.29■■■■□ 3.08
FAM228B-208ENST00000613899 TRPM2O94759 1503 aa34.28■■■■□ 3.08
FAM228B-208ENST00000613899 SENP3Q9H4L4 574 aaPredicted RBP34.25■■■■□ 3.07
FAM228B-208ENST00000613899 PROSER2Q86WR7 435 aaPredicted RBP34.24■■■■□ 3.07
FAM228B-208ENST00000613899 CLTCL1P53675 1640 aa34.23■■■■□ 3.07
FAM228B-208ENST00000613899 TBX22Q9Y458 520 aa34.23■■■■□ 3.07
FAM228B-208ENST00000613899 ADAMTS13Q76LX8 1427 aa34.22■■■■□ 3.07
FAM228B-208ENST00000613899 NUTM2DQ5VT03 806 aaPredicted RBP34.22■■■■□ 3.07
FAM228B-208ENST00000613899 TRIM52Q96A61 297 aa34.2■■■■□ 3.07
FAM228B-208ENST00000613899 KIF1BO60333 1816 aa34.18■■■■□ 3.06
FAM228B-208ENST00000613899 PIK3R4Q99570 1358 aa34.18■■■■□ 3.06
FAM228B-208ENST00000613899 MSH6P52701 1360 aa34.14■■■■□ 3.06
FAM228B-208ENST00000613899 ZNF326Q5BKZ1 582 aaKnown RBP34.14■■■■□ 3.06
FAM228B-208ENST00000613899 SETBP1Q9Y6X0 1596 aa34.14■■■■□ 3.06
FAM228B-208ENST00000613899 MED1Q15648 1581 aaPredicted RBP34.13■■■■□ 3.05
FAM228B-208ENST00000613899 RBM33Q96EV2 1170 aaKnown RBP34.12■■■■□ 3.05
FAM228B-208ENST00000613899 FAM135BQ49AJ0 1406 aa34.12■■■■□ 3.05
FAM228B-208ENST00000613899 NRXN3Q9Y4C0 1643 aa34.12■■■■□ 3.05
FAM228B-208ENST00000613899 SLC4A1APQ9BWU0 796 aaKnown RBP34.11■■■■□ 3.05
FAM228B-208ENST00000613899 NEXMIFQ5QGS0 1516 aa34.1■■■■□ 3.05
FAM228B-208ENST00000613899 NCOA3Q9Y6Q9 1424 aa34.1■■■■□ 3.05
FAM228B-208ENST00000613899 ILDR2Q71H61 639 aa34.07■■■■□ 3.04
FAM228B-208ENST00000613899 ROBO1Q9Y6N7 1651 aa34.06■■■■□ 3.04
FAM228B-208ENST00000613899 XRN1Q8IZH2 1706 aaKnown RBP34.01■■■■□ 3.04
FAM228B-208ENST00000613899 PTPRUQ92729 1446 aa34■■■■□ 3.03
FAM228B-208ENST00000613899 C14orf37Q86TY3 774 aa33.98■■■■□ 3.03
FAM228B-208ENST00000613899 AMOTL2Q9Y2J4 779 aa33.98■■■■□ 3.03
FAM228B-208ENST00000613899 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.95■■■■□ 3.03
FAM228B-208ENST00000613899 SLAIN2Q9P270 581 aa33.94■■■■□ 3.02
FAM228B-208ENST00000613899 ACIN1Q9UKV3 1341 aaKnown RBP33.94■■■■□ 3.02
FAM228B-208ENST00000613899 RPGRIP1LQ68CZ1 1315 aa33.92■■■■□ 3.02
FAM228B-208ENST00000613899 METP08581 1390 aa33.92■■■■□ 3.02
FAM228B-208ENST00000613899 PPLO60437 1756 aa33.92■■■■□ 3.02
FAM228B-208ENST00000613899 C19orf44Q9H6X5 657 aa33.91■■■■□ 3.02
FAM228B-208ENST00000613899 CCDC144AA2RUR9 1427 aa33.9■■■■□ 3.02
FAM228B-208ENST00000613899 VGFO15240 615 aaPredicted RBP33.9■■■■□ 3.02
FAM228B-208ENST00000613899 CADPS2Q86UW7 1296 aa33.89■■■■□ 3.02
FAM228B-208ENST00000613899 SETD5Q9C0A6 1442 aa33.88■■■■□ 3.01
FAM228B-208ENST00000613899 FOXD1Q16676 465 aa33.88■■■■□ 3.01
FAM228B-208ENST00000613899 PHLPP1O60346 1717 aa33.87■■■■□ 3.01
FAM228B-208ENST00000613899 MPHOSPH9Q99550 1183 aa33.87■■■■□ 3.01
FAM228B-208ENST00000613899 DCCP43146 1447 aa33.87■■■■□ 3.01
FAM228B-208ENST00000613899 SOCS7O14512 581 aa33.86■■■■□ 3.01
FAM228B-208ENST00000613899 ATF3P18847 181 aa33.86■■■■□ 3.01
FAM228B-208ENST00000613899 PHF23Q9BUL5 403 aaPredicted RBP33.86■■■■□ 3.01
FAM228B-208ENST00000613899 SETD1AO15047 1707 aaKnown RBP33.86■■■■□ 3.01
FAM228B-208ENST00000613899 PTCH1Q13635 1447 aa33.77■■■■□ 3
FAM228B-208ENST00000613899 SPATA31E1Q6ZUB1 1445 aa33.77■■■■□ 3
FAM228B-208ENST00000613899 COL16A1Q07092 1604 aaPredicted RBP33.76■■■■□ 3
FAM228B-208ENST00000613899 ADGRL3Q9HAR2 1447 aa33.76■■■□□ 2.99
FAM228B-208ENST00000613899 IFT172Q9UG01 1749 aa33.76■■■□□ 2.99
FAM228B-208ENST00000613899 AHDC1Q5TGY3 1603 aaPredicted RBP33.75■■■□□ 2.99
FAM228B-208ENST00000613899 NALCNQ8IZF0 1738 aa33.75■■■□□ 2.99
FAM228B-208ENST00000613899 RAB3GAP2Q9H2M9 1393 aa33.74■■■□□ 2.99
FAM228B-208ENST00000613899 PRAG1Q86YV5 1406 aa33.74■■■□□ 2.99
FAM228B-208ENST00000613899 JCADQ9P266 1359 aa33.72■■■□□ 2.99
FAM228B-208ENST00000613899 ANKRD30BQ9BXX2 1392 aa33.71■■■□□ 2.99
FAM228B-208ENST00000613899 MST1RQ04912 1400 aa33.7■■■□□ 2.98
FAM228B-208ENST00000613899 RGL3Q3MIN7 710 aa33.68■■■□□ 2.98
FAM228B-208ENST00000613899 ASXL1Q8IXJ9 1541 aa33.67■■■□□ 2.98
FAM228B-208ENST00000613899 BRINP3Q76B58 766 aa33.66■■■□□ 2.98
FAM228B-208ENST00000613899 ROBO2Q9HCK4 1378 aa33.65■■■□□ 2.98
FAM228B-208ENST00000613899 ADGRF5Q8IZF2 1346 aa33.64■■■□□ 2.98
FAM228B-208ENST00000613899 NHSL1Q5SYE7 1610 aa33.61■■■□□ 2.97
FAM228B-208ENST00000613899 SHPRHQ149N8 1683 aa33.61■■■□□ 2.97
FAM228B-208ENST00000613899 PIK3C2GO75747 1445 aa33.6■■■□□ 2.97
FAM228B-208ENST00000613899 RGS17Q9UGC6 210 aaPredicted RBP33.56■■■□□ 2.96
FAM228B-208ENST00000613899 SPATA31A6Q5VVP1 1343 aa33.55■■■□□ 2.96
FAM228B-208ENST00000613899 KNDC1Q76NI1 1749 aa33.54■■■□□ 2.96
FAM228B-208ENST00000613899 TECPR2O15040 1411 aa33.53■■■□□ 2.96
FAM228B-208ENST00000613899 MYOM2P54296 1465 aa33.53■■■□□ 2.96
FAM228B-208ENST00000613899 C1orf167Q5SNV9 1468 aa33.53■■■□□ 2.96
FAM228B-208ENST00000613899 LAMC1P11047 1609 aa33.51■■■□□ 2.96
FAM228B-208ENST00000613899 HRCP23327 699 aa33.51■■■□□ 2.95
FAM228B-208ENST00000613899 CDC42BPGQ6DT37 1551 aa33.51■■■□□ 2.95
FAM228B-208ENST00000613899 LRPPRCP42704 1394 aaKnown RBP33.5■■■□□ 2.95
FAM228B-208ENST00000613899 NRXN1Q9ULB1 1477 aa33.5■■■□□ 2.95
FAM228B-208ENST00000613899 LRP6O75581 1613 aa33.48■■■□□ 2.95
FAM228B-208ENST00000613899 ABCC11Q96J66 1382 aa33.47■■■□□ 2.95
FAM228B-208ENST00000613899 STK26Q9P289 416 aa33.44■■■□□ 2.94
FAM228B-208ENST00000613899 YTHDC2Q9H6S0 1430 aaKnown RBP33.43■■■□□ 2.94
FAM228B-208ENST00000613899 TMEM132EQ6IEE7 984 aa33.42■■■□□ 2.94
FAM228B-208ENST00000613899 LRRC59Q96AG4 307 aaKnown RBP33.42■■■□□ 2.94
FAM228B-208ENST00000613899 MEX3CQ5U5Q3 659 aaKnown RBP33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms