RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 ZNF608Q9ULD9 1512 aaPredicted RBP9.22□□□□□ -0.93
CDKAL1-204ENST00000613575 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
CDKAL1-204ENST00000613575 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
CDKAL1-204ENST00000613575 MAGI3Q5TCQ9 1506 aa9.22□□□□□ -0.93
CDKAL1-204ENST00000613575 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
CDKAL1-204ENST00000613575 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
CDKAL1-204ENST00000613575 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
CDKAL1-204ENST00000613575 DISP1Q96F81 1524 aa9.2□□□□□ -0.94
CDKAL1-204ENST00000613575 PBRM1Q86U86 1689 aa9.19□□□□□ -0.94
CDKAL1-204ENST00000613575 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
CDKAL1-204ENST00000613575 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
CDKAL1-204ENST00000613575 HECW1Q76N89 1606 aa9.19□□□□□ -0.94
CDKAL1-204ENST00000613575 LRRIQ1Q96JM4 1722 aa9.18□□□□□ -0.94
CDKAL1-204ENST00000613575 AAMPQ13685 434 aa9.18□□□□□ -0.94
CDKAL1-204ENST00000613575 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
CDKAL1-204ENST00000613575 MAGI1Q96QZ7 1491 aaPredicted RBP9.18□□□□□ -0.94
CDKAL1-204ENST00000613575 ROCK1Q13464 1354 aa9.18□□□□□ -0.94
CDKAL1-204ENST00000613575 PTPN23Q9H3S7 1636 aa9.17□□□□□ -0.94
CDKAL1-204ENST00000613575 TMEM92Q6UXU6 159 aa9.17□□□□□ -0.94
CDKAL1-204ENST00000613575 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 YTHDC1Q96MU7 727 aaKnown RBP9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 DSG2Q14126 1118 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 MFSD10Q14728 455 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 ZNF326Q5BKZ1 582 aaKnown RBP9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 MARVELD3Q96A59 401 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 JPH4Q96JJ6 628 aa9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 RBM19Q9Y4C8 960 aaKnown RBP9.16□□□□□ -0.94
CDKAL1-204ENST00000613575 ERCC6L2Q5T890 1561 aa9.15□□□□□ -0.94
CDKAL1-204ENST00000613575 E2F4Q16254 413 aa9.15□□□□□ -0.94
CDKAL1-204ENST00000613575 NUP160Q12769 1436 aa9.15□□□□□ -0.95
CDKAL1-204ENST00000613575 SYNJ2O15056 1496 aa9.15□□□□□ -0.95
CDKAL1-204ENST00000613575 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
CDKAL1-204ENST00000613575 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
CDKAL1-204ENST00000613575 TONSLQ96HA7 1378 aa9.14□□□□□ -0.95
CDKAL1-204ENST00000613575 KIF3CO14782 793 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 FOXK1P85037 733 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 MPHOSPH9Q99550 1183 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 CCER2I3L3R5 266 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 ABCC5O15440 1437 aa9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
CDKAL1-204ENST00000613575 A0A0U1RQG5 324 aaPredicted RBP9.12□□□□□ -0.95
CDKAL1-204ENST00000613575 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
CDKAL1-204ENST00000613575 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
CDKAL1-204ENST00000613575 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
CDKAL1-204ENST00000613575 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
CDKAL1-204ENST00000613575 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
CDKAL1-204ENST00000613575 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
CDKAL1-204ENST00000613575 CARMIL2Q6F5E8 1435 aa9.11□□□□□ -0.95
CDKAL1-204ENST00000613575 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
CDKAL1-204ENST00000613575 EIF4G3O43432 1585 aaKnown RBP9.1□□□□□ -0.95
CDKAL1-204ENST00000613575 KDM5BQ9UGL1 1544 aa9.1□□□□□ -0.95
CDKAL1-204ENST00000613575 DAPK1P53355 1430 aa9.1□□□□□ -0.95
CDKAL1-204ENST00000613575 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
CDKAL1-204ENST00000613575 DISP3Q9P2K9 1392 aa9.09□□□□□ -0.95
CDKAL1-204ENST00000613575 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
CDKAL1-204ENST00000613575 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 RAPGEF6Q8TEU7 1601 aa9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 ZNF644Q9H582 1327 aaPredicted RBP9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 GPATCH8Q9UKJ3 1502 aaKnown RBP9.08□□□□□ -0.96
CDKAL1-204ENST00000613575 CYB5RLQ6IPT4 315 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 CFDP1Q9UEE9 299 aaPredicted RBP9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 PRG4Q92954 1404 aaPredicted RBP9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 SNPHO15079 494 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 NBR1Q14596 966 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 BCANQ96GW7 911 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 NCOA1Q15788 1441 aa9.07□□□□□ -0.96
CDKAL1-204ENST00000613575 GCC2Q8IWJ2 1684 aa9.06□□□□□ -0.96
CDKAL1-204ENST00000613575 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
CDKAL1-204ENST00000613575 NPM2Q86SE8 214 aaKnown RBP9.06□□□□□ -0.96
CDKAL1-204ENST00000613575 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
CDKAL1-204ENST00000613575 PLB1Q6P1J6 1458 aa9.05□□□□□ -0.96
CDKAL1-204ENST00000613575 ARID3CA6NKF2 412 aa9.05□□□□□ -0.96
CDKAL1-204ENST00000613575 ANP32CO43423 234 aa9.05□□□□□ -0.96
CDKAL1-204ENST00000613575 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
CDKAL1-204ENST00000613575 KCNH8Q96L42 1107 aa9.05□□□□□ -0.96
CDKAL1-204ENST00000613575 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDKAL1-204ENST00000613575 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
CDKAL1-204ENST00000613575 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
CDKAL1-204ENST00000613575 RSPH4AQ5TD94 716 aa9.04□□□□□ -0.96
CDKAL1-204ENST00000613575 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
CDKAL1-204ENST00000613575 ATP10BO94823 1461 aa9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 RPRD2Q5VT52 1461 aaKnown RBP9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 HIRIP3Q9BW71 556 aaPredicted RBP9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 ABCA8O94911 1581 aa9.03□□□□□ -0.96
CDKAL1-204ENST00000613575 KDM6BO15054 1643 aa9.02□□□□□ -0.96
CDKAL1-204ENST00000613575 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms