RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
CSTF1-208ENST00000613138 TRPM2O94759 1503 aa18.98■□□□□ 0.63
CSTF1-208ENST00000613138 RAB3GAP2Q9H2M9 1393 aa18.97■□□□□ 0.63
CSTF1-208ENST00000613138 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
CSTF1-208ENST00000613138 KIF1BO60333 1816 aa18.96■□□□□ 0.63
CSTF1-208ENST00000613138 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
CSTF1-208ENST00000613138 MPHOSPH9Q99550 1183 aa18.93■□□□□ 0.62
CSTF1-208ENST00000613138 BCANQ96GW7 911 aa18.92■□□□□ 0.62
CSTF1-208ENST00000613138 CPS1P31327 1500 aa18.91■□□□□ 0.62
CSTF1-208ENST00000613138 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
CSTF1-208ENST00000613138 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
CSTF1-208ENST00000613138 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
CSTF1-208ENST00000613138 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
CSTF1-208ENST00000613138 PLEKHG1Q9ULL1 1385 aa18.89■□□□□ 0.61
CSTF1-208ENST00000613138 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
CSTF1-208ENST00000613138 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
CSTF1-208ENST00000613138 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
CSTF1-208ENST00000613138 CHD2O14647 1828 aaKnown RBP18.87■□□□□ 0.61
CSTF1-208ENST00000613138 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
CSTF1-208ENST00000613138 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
CSTF1-208ENST00000613138 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
CSTF1-208ENST00000613138 PPLO60437 1756 aa18.83■□□□□ 0.61
CSTF1-208ENST00000613138 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.83■□□□□ 0.6
CSTF1-208ENST00000613138 NWD1Q149M9 1564 aa18.83■□□□□ 0.6
CSTF1-208ENST00000613138 KCNA6P17658 529 aa18.81■□□□□ 0.6
CSTF1-208ENST00000613138 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
CSTF1-208ENST00000613138 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
CSTF1-208ENST00000613138 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CSTF1-208ENST00000613138 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
CSTF1-208ENST00000613138 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
CSTF1-208ENST00000613138 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
CSTF1-208ENST00000613138 TBX22Q9Y458 520 aa18.78■□□□□ 0.6
CSTF1-208ENST00000613138 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
CSTF1-208ENST00000613138 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.6
CSTF1-208ENST00000613138 IFT172Q9UG01 1749 aa18.77■□□□□ 0.6
CSTF1-208ENST00000613138 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
CSTF1-208ENST00000613138 DIP2AQ14689 1571 aa18.77■□□□□ 0.6
CSTF1-208ENST00000613138 SPATA31E1Q6ZUB1 1445 aa18.77■□□□□ 0.6
CSTF1-208ENST00000613138 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
CSTF1-208ENST00000613138 METP08581 1390 aa18.76■□□□□ 0.59
CSTF1-208ENST00000613138 NKTRP30414 1462 aaKnown RBP18.74■□□□□ 0.59
CSTF1-208ENST00000613138 XRN1Q8IZH2 1706 aaKnown RBP18.73■□□□□ 0.59
CSTF1-208ENST00000613138 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
CSTF1-208ENST00000613138 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
CSTF1-208ENST00000613138 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
CSTF1-208ENST00000613138 TOM1O60784 492 aa18.7■□□□□ 0.58
CSTF1-208ENST00000613138 HRCP23327 699 aa18.69■□□□□ 0.58
CSTF1-208ENST00000613138 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
CSTF1-208ENST00000613138 RPGRIP1LQ68CZ1 1315 aa18.68■□□□□ 0.58
CSTF1-208ENST00000613138 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
CSTF1-208ENST00000613138 HSPA1LP34931 641 aa18.67■□□□□ 0.58
CSTF1-208ENST00000613138 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
CSTF1-208ENST00000613138 PIK3R4Q99570 1358 aa18.66■□□□□ 0.58
CSTF1-208ENST00000613138 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
CSTF1-208ENST00000613138 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
CSTF1-208ENST00000613138 ROBO1Q9Y6N7 1651 aa18.62■□□□□ 0.57
CSTF1-208ENST00000613138 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
CSTF1-208ENST00000613138 MSH6P52701 1360 aa18.61■□□□□ 0.57
CSTF1-208ENST00000613138 TMEM132EQ6IEE7 984 aa18.61■□□□□ 0.57
CSTF1-208ENST00000613138 PIK3C2GO75747 1445 aa18.6■□□□□ 0.57
CSTF1-208ENST00000613138 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
CSTF1-208ENST00000613138 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
CSTF1-208ENST00000613138 STK26Q9P289 416 aa18.58■□□□□ 0.56
CSTF1-208ENST00000613138 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
CSTF1-208ENST00000613138 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
CSTF1-208ENST00000613138 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
CSTF1-208ENST00000613138 MYOM2P54296 1465 aa18.57■□□□□ 0.56
CSTF1-208ENST00000613138 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
CSTF1-208ENST00000613138 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
CSTF1-208ENST00000613138 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
CSTF1-208ENST00000613138 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
CSTF1-208ENST00000613138 PTCH1Q13635 1447 aa18.53■□□□□ 0.56
CSTF1-208ENST00000613138 FAM135BQ49AJ0 1406 aa18.53■□□□□ 0.56
CSTF1-208ENST00000613138 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
CSTF1-208ENST00000613138 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
CSTF1-208ENST00000613138 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
CSTF1-208ENST00000613138 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.56
CSTF1-208ENST00000613138 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
CSTF1-208ENST00000613138 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
CSTF1-208ENST00000613138 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
CSTF1-208ENST00000613138 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
CSTF1-208ENST00000613138 ATF3P18847 181 aa18.5■□□□□ 0.55
CSTF1-208ENST00000613138 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
CSTF1-208ENST00000613138 MST1RQ04912 1400 aa18.49■□□□□ 0.55
CSTF1-208ENST00000613138 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
CSTF1-208ENST00000613138 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
CSTF1-208ENST00000613138 LAMC1P11047 1609 aa18.49■□□□□ 0.55
CSTF1-208ENST00000613138 ADGRB1O14514 1584 aa18.48■□□□□ 0.55
CSTF1-208ENST00000613138 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
CSTF1-208ENST00000613138 TECPR2O15040 1411 aa18.47■□□□□ 0.55
CSTF1-208ENST00000613138 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
CSTF1-208ENST00000613138 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
CSTF1-208ENST00000613138 DCCP43146 1447 aa18.46■□□□□ 0.55
CSTF1-208ENST00000613138 MED1Q15648 1581 aaPredicted RBP18.46■□□□□ 0.55
CSTF1-208ENST00000613138 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
CSTF1-208ENST00000613138 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
CSTF1-208ENST00000613138 BRINP3Q76B58 766 aa18.45■□□□□ 0.54
CSTF1-208ENST00000613138 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
CSTF1-208ENST00000613138 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
CSTF1-208ENST00000613138 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms