RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 ARHGAP23Q9P227 1491 aa17.55■□□□□ 0.4
LINC00272-202ENST00000612603 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
LINC00272-202ENST00000612603 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
LINC00272-202ENST00000612603 CCDC144AA2RUR9 1427 aa17.51■□□□□ 0.39
LINC00272-202ENST00000612603 MED14O60244 1454 aa17.5■□□□□ 0.39
LINC00272-202ENST00000612603 HDGFP51858 240 aaKnown RBP17.49■□□□□ 0.39
LINC00272-202ENST00000612603 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
LINC00272-202ENST00000612603 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
LINC00272-202ENST00000612603 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
LINC00272-202ENST00000612603 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00272-202ENST00000612603 HRCP23327 699 aa17.46■□□□□ 0.39
LINC00272-202ENST00000612603 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
LINC00272-202ENST00000612603 LTBP4Q8N2S1 1624 aa17.43■□□□□ 0.38
LINC00272-202ENST00000612603 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
LINC00272-202ENST00000612603 PLEKHG1Q9ULL1 1385 aa17.42■□□□□ 0.38
LINC00272-202ENST00000612603 STRCP1A6NGW2 1772 aa17.42■□□□□ 0.38
LINC00272-202ENST00000612603 PPLO60437 1756 aa17.4■□□□□ 0.38
LINC00272-202ENST00000612603 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
LINC00272-202ENST00000612603 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
LINC00272-202ENST00000612603 CPS1P31327 1500 aa17.37■□□□□ 0.37
LINC00272-202ENST00000612603 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
LINC00272-202ENST00000612603 SPATA31E1Q6ZUB1 1445 aa17.35■□□□□ 0.37
LINC00272-202ENST00000612603 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
LINC00272-202ENST00000612603 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
LINC00272-202ENST00000612603 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
LINC00272-202ENST00000612603 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
LINC00272-202ENST00000612603 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
LINC00272-202ENST00000612603 CHD2O14647 1828 aaKnown RBP17.33■□□□□ 0.37
LINC00272-202ENST00000612603 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.36
LINC00272-202ENST00000612603 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
LINC00272-202ENST00000612603 KDM2AQ9Y2K7 1162 aa17.32■□□□□ 0.36
LINC00272-202ENST00000612603 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
LINC00272-202ENST00000612603 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
LINC00272-202ENST00000612603 KCNA6P17658 529 aa17.31■□□□□ 0.36
LINC00272-202ENST00000612603 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
LINC00272-202ENST00000612603 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
LINC00272-202ENST00000612603 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
LINC00272-202ENST00000612603 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
LINC00272-202ENST00000612603 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
LINC00272-202ENST00000612603 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
LINC00272-202ENST00000612603 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
LINC00272-202ENST00000612603 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
LINC00272-202ENST00000612603 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
LINC00272-202ENST00000612603 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
LINC00272-202ENST00000612603 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
LINC00272-202ENST00000612603 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
LINC00272-202ENST00000612603 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
LINC00272-202ENST00000612603 AMOTL2Q9Y2J4 779 aa17.27■□□□□ 0.36
LINC00272-202ENST00000612603 ALKQ9UM73 1620 aa17.27■□□□□ 0.36
LINC00272-202ENST00000612603 METP08581 1390 aa17.27■□□□□ 0.35
LINC00272-202ENST00000612603 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
LINC00272-202ENST00000612603 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
LINC00272-202ENST00000612603 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
LINC00272-202ENST00000612603 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
LINC00272-202ENST00000612603 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
LINC00272-202ENST00000612603 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
LINC00272-202ENST00000612603 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
LINC00272-202ENST00000612603 STK26Q9P289 416 aa17.23■□□□□ 0.35
LINC00272-202ENST00000612603 XRN1Q8IZH2 1706 aaKnown RBP17.22■□□□□ 0.35
LINC00272-202ENST00000612603 MYOM2P54296 1465 aa17.22■□□□□ 0.35
LINC00272-202ENST00000612603 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
LINC00272-202ENST00000612603 TOM1O60784 492 aa17.21■□□□□ 0.35
LINC00272-202ENST00000612603 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
LINC00272-202ENST00000612603 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
LINC00272-202ENST00000612603 MSH6P52701 1360 aa17.19■□□□□ 0.34
LINC00272-202ENST00000612603 LAMC1P11047 1609 aa17.18■□□□□ 0.34
LINC00272-202ENST00000612603 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
LINC00272-202ENST00000612603 NRXN1Q9ULB1 1477 aa17.16■□□□□ 0.34
LINC00272-202ENST00000612603 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
LINC00272-202ENST00000612603 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
LINC00272-202ENST00000612603 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
LINC00272-202ENST00000612603 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
LINC00272-202ENST00000612603 NALCNQ8IZF0 1738 aa17.13■□□□□ 0.33
LINC00272-202ENST00000612603 ATF3P18847 181 aa17.13■□□□□ 0.33
LINC00272-202ENST00000612603 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
LINC00272-202ENST00000612603 YTHDC2Q9H6S0 1430 aaKnown RBP17.13■□□□□ 0.33
LINC00272-202ENST00000612603 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
LINC00272-202ENST00000612603 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC00272-202ENST00000612603 LRPPRCP42704 1394 aaKnown RBP17.11■□□□□ 0.33
LINC00272-202ENST00000612603 PTCH1Q13635 1447 aa17.11■□□□□ 0.33
LINC00272-202ENST00000612603 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
LINC00272-202ENST00000612603 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
LINC00272-202ENST00000612603 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
LINC00272-202ENST00000612603 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
LINC00272-202ENST00000612603 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
LINC00272-202ENST00000612603 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
LINC00272-202ENST00000612603 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
LINC00272-202ENST00000612603 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
LINC00272-202ENST00000612603 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
LINC00272-202ENST00000612603 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
LINC00272-202ENST00000612603 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
LINC00272-202ENST00000612603 POGKQ9P215 609 aa17.07■□□□□ 0.32
LINC00272-202ENST00000612603 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
LINC00272-202ENST00000612603 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
LINC00272-202ENST00000612603 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
LINC00272-202ENST00000612603 HSPA1LP34931 641 aa17.05■□□□□ 0.32
LINC00272-202ENST00000612603 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
LINC00272-202ENST00000612603 TECPR2O15040 1411 aa17.04■□□□□ 0.32
LINC00272-202ENST00000612603 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
LINC00272-202ENST00000612603 NUTM2FA1L443 756 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms