RNA–Protein interactions for RNA: ENST00000611786.4

ATRAID-208, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-208ENST00000611786 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
ATRAID-208ENST00000611786 CCDC144AA2RUR9 1427 aa29.93■■■□□ 2.38
ATRAID-208ENST00000611786 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.92■■■□□ 2.38
ATRAID-208ENST00000611786 ZNF326Q5BKZ1 582 aaKnown RBP29.87■■■□□ 2.37
ATRAID-208ENST00000611786 ANKRD30BQ9BXX2 1392 aa29.87■■■□□ 2.37
ATRAID-208ENST00000611786 PPP1R15AO75807 674 aaPredicted RBP29.85■■■□□ 2.37
ATRAID-208ENST00000611786 PLEKHG1Q9ULL1 1385 aa29.85■■■□□ 2.37
ATRAID-208ENST00000611786 LTBP4Q8N2S1 1624 aa29.83■■■□□ 2.37
ATRAID-208ENST00000611786 ZNF335Q9H4Z2 1342 aaPredicted RBP29.83■■■□□ 2.37
ATRAID-208ENST00000611786 NEXMIFQ5QGS0 1516 aa29.82■■■□□ 2.36
ATRAID-208ENST00000611786 SPATA31E1Q6ZUB1 1445 aa29.81■■■□□ 2.36
ATRAID-208ENST00000611786 RPGRIP1LQ68CZ1 1315 aa29.81■■■□□ 2.36
ATRAID-208ENST00000611786 NUTM2DQ5VT03 806 aaPredicted RBP29.81■■■□□ 2.36
ATRAID-208ENST00000611786 BCANQ96GW7 911 aa29.76■■■□□ 2.35
ATRAID-208ENST00000611786 PPLO60437 1756 aa29.75■■■□□ 2.35
ATRAID-208ENST00000611786 SLC26A8Q96RN1 970 aa29.75■■■□□ 2.35
ATRAID-208ENST00000611786 CERKQ8TCT0 537 aa29.74■■■□□ 2.35
ATRAID-208ENST00000611786 VGFO15240 615 aaPredicted RBP29.73■■■□□ 2.35
ATRAID-208ENST00000611786 TBX22Q9Y458 520 aa29.72■■■□□ 2.35
ATRAID-208ENST00000611786 ADAMTS13Q76LX8 1427 aa29.71■■■□□ 2.35
ATRAID-208ENST00000611786 CPS1P31327 1500 aa29.71■■■□□ 2.35
ATRAID-208ENST00000611786 RGL3Q3MIN7 710 aa29.71■■■□□ 2.35
ATRAID-208ENST00000611786 SETBP1Q9Y6X0 1596 aa29.71■■■□□ 2.35
ATRAID-208ENST00000611786 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.35
ATRAID-208ENST00000611786 DIP2AQ14689 1571 aa29.7■■■□□ 2.35
ATRAID-208ENST00000611786 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
ATRAID-208ENST00000611786 SENP3Q9H4L4 574 aaPredicted RBP29.69■■■□□ 2.34
ATRAID-208ENST00000611786 NRXN3Q9Y4C0 1643 aa29.69■■■□□ 2.34
ATRAID-208ENST00000611786 DHX57Q6P158 1386 aaKnown RBP29.66■■■□□ 2.34
ATRAID-208ENST00000611786 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
ATRAID-208ENST00000611786 IQSEC2Q5JU85 1478 aa29.65■■■□□ 2.34
ATRAID-208ENST00000611786 KCNA6P17658 529 aa29.64■■■□□ 2.34
ATRAID-208ENST00000611786 CHD2O14647 1828 aaKnown RBP29.63■■■□□ 2.33
ATRAID-208ENST00000611786 PIK3R4Q99570 1358 aa29.62■■■□□ 2.33
ATRAID-208ENST00000611786 NWD1Q149M9 1564 aa29.61■■■□□ 2.33
ATRAID-208ENST00000611786 ADGRF5Q8IZF2 1346 aa29.58■■■□□ 2.33
ATRAID-208ENST00000611786 LRRC7Q96NW7 1537 aa29.58■■■□□ 2.33
ATRAID-208ENST00000611786 MYOM2P54296 1465 aa29.55■■■□□ 2.32
ATRAID-208ENST00000611786 ALKQ9UM73 1620 aa29.55■■■□□ 2.32
ATRAID-208ENST00000611786 NKTRP30414 1462 aaKnown RBP29.55■■■□□ 2.32
ATRAID-208ENST00000611786 SETD1AO15047 1707 aaKnown RBP29.54■■■□□ 2.32
ATRAID-208ENST00000611786 NRXN1Q9ULB1 1477 aa29.54■■■□□ 2.32
ATRAID-208ENST00000611786 METP08581 1390 aa29.53■■■□□ 2.32
ATRAID-208ENST00000611786 PIK3C2GO75747 1445 aa29.53■■■□□ 2.32
ATRAID-208ENST00000611786 STAC3Q96MF2 364 aa29.52■■■□□ 2.32
ATRAID-208ENST00000611786 FBXO41Q8TF61 875 aa29.51■■■□□ 2.31
ATRAID-208ENST00000611786 PTPRUQ92729 1446 aa29.51■■■□□ 2.31
ATRAID-208ENST00000611786 DCAF11Q8TEB1 546 aa29.49■■■□□ 2.31
ATRAID-208ENST00000611786 AMOTL2Q9Y2J4 779 aa29.49■■■□□ 2.31
ATRAID-208ENST00000611786 XIRP1Q702N8 1843 aaKnown RBP29.49■■■□□ 2.31
ATRAID-208ENST00000611786 PROSER2Q86WR7 435 aaPredicted RBP29.47■■■□□ 2.31
ATRAID-208ENST00000611786 SIN3AQ96ST3 1273 aa29.47■■■□□ 2.31
ATRAID-208ENST00000611786 XRN1Q8IZH2 1706 aaKnown RBP29.47■■■□□ 2.31
ATRAID-208ENST00000611786 TMEM94Q12767 1356 aa29.45■■■□□ 2.31
ATRAID-208ENST00000611786 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
ATRAID-208ENST00000611786 KDM2AQ9Y2K7 1162 aa29.43■■■□□ 2.3
ATRAID-208ENST00000611786 LAMC1P11047 1609 aa29.42■■■□□ 2.3
ATRAID-208ENST00000611786 NCOA3Q9Y6Q9 1424 aa29.4■■■□□ 2.3
ATRAID-208ENST00000611786 NEUROD1Q13562 356 aa29.4■■■□□ 2.3
ATRAID-208ENST00000611786 PRAG1Q86YV5 1406 aa29.38■■■□□ 2.29
ATRAID-208ENST00000611786 RBM33Q96EV2 1170 aaKnown RBP29.38■■■□□ 2.29
ATRAID-208ENST00000611786 CFAP70Q5T0N1 1121 aa29.37■■■□□ 2.29
ATRAID-208ENST00000611786 ILDR1Q86SU0 546 aaPredicted RBP29.37■■■□□ 2.29
ATRAID-208ENST00000611786 UBAP1LF5GYI3 381 aa29.36■■■□□ 2.29
ATRAID-208ENST00000611786 ASXL1Q8IXJ9 1541 aa29.35■■■□□ 2.29
ATRAID-208ENST00000611786 TOM1O60784 492 aa29.35■■■□□ 2.29
ATRAID-208ENST00000611786 L3MBTL2Q969R5 705 aa29.35■■■□□ 2.29
ATRAID-208ENST00000611786 PTCH1Q13635 1447 aa29.34■■■□□ 2.29
ATRAID-208ENST00000611786 TMEM132EQ6IEE7 984 aa29.33■■■□□ 2.29
ATRAID-208ENST00000611786 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
ATRAID-208ENST00000611786 TECPR2O15040 1411 aa29.3■■■□□ 2.28
ATRAID-208ENST00000611786 MSH6P52701 1360 aa29.3■■■□□ 2.28
ATRAID-208ENST00000611786 ABCC11Q96J66 1382 aa29.3■■■□□ 2.28
ATRAID-208ENST00000611786 YTHDC2Q9H6S0 1430 aaKnown RBP29.29■■■□□ 2.28
ATRAID-208ENST00000611786 ROBO2Q9HCK4 1378 aa29.29■■■□□ 2.28
ATRAID-208ENST00000611786 KNDC1Q76NI1 1749 aa29.28■■■□□ 2.28
ATRAID-208ENST00000611786 ADGRB1O14514 1584 aa29.27■■■□□ 2.28
ATRAID-208ENST00000611786 C19orf44Q9H6X5 657 aa29.27■■■□□ 2.28
ATRAID-208ENST00000611786 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.27
ATRAID-208ENST00000611786 KIAA1210Q9ULL0 1709 aa29.26■■■□□ 2.27
ATRAID-208ENST00000611786 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
ATRAID-208ENST00000611786 STK26Q9P289 416 aa29.26■■■□□ 2.27
ATRAID-208ENST00000611786 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.24■■■□□ 2.27
ATRAID-208ENST00000611786 SIRT1Q96EB6 747 aa29.23■■■□□ 2.27
ATRAID-208ENST00000611786 TONSLQ96HA7 1378 aa29.21■■■□□ 2.27
ATRAID-208ENST00000611786 DCCP43146 1447 aa29.2■■■□□ 2.27
ATRAID-208ENST00000611786 ADGRL3Q9HAR2 1447 aa29.2■■■□□ 2.27
ATRAID-208ENST00000611786 PIP4K2BP78356 416 aa29.2■■■□□ 2.26
ATRAID-208ENST00000611786 NALCNQ8IZF0 1738 aa29.2■■■□□ 2.26
ATRAID-208ENST00000611786 FAM135BQ49AJ0 1406 aa29.2■■■□□ 2.26
ATRAID-208ENST00000611786 CADPS2Q86UW7 1296 aa29.19■■■□□ 2.26
ATRAID-208ENST00000611786 DLC1Q96QB1 1528 aa29.18■■■□□ 2.26
ATRAID-208ENST00000611786 ATF3P18847 181 aa29.17■■■□□ 2.26
ATRAID-208ENST00000611786 WAPLQ7Z5K2 1190 aa29.16■■■□□ 2.26
ATRAID-208ENST00000611786 SLAIN2Q9P270 581 aa29.15■■■□□ 2.26
ATRAID-208ENST00000611786 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
ATRAID-208ENST00000611786 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
ATRAID-208ENST00000611786 PLEKHH1Q9ULM0 1364 aa29.13■■■□□ 2.25
ATRAID-208ENST00000611786 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
ATRAID-208ENST00000611786 TRAK1Q9UPV9 953 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms