RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
TPGS2-220ENST00000610723 STRCP1A6NGW2 1772 aa24.68■■□□□ 1.54
TPGS2-220ENST00000610723 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
TPGS2-220ENST00000610723 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
TPGS2-220ENST00000610723 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
TPGS2-220ENST00000610723 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.65■■□□□ 1.54
TPGS2-220ENST00000610723 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.54
TPGS2-220ENST00000610723 PLEKHG1Q9ULL1 1385 aa24.63■■□□□ 1.53
TPGS2-220ENST00000610723 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
TPGS2-220ENST00000610723 TOM1O60784 492 aa24.63■■□□□ 1.53
TPGS2-220ENST00000610723 PIP4K2BP78356 416 aa24.61■■□□□ 1.53
TPGS2-220ENST00000610723 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
TPGS2-220ENST00000610723 KCNA6P17658 529 aa24.6■■□□□ 1.53
TPGS2-220ENST00000610723 TRPM2O94759 1503 aa24.58■■□□□ 1.53
TPGS2-220ENST00000610723 CLTCL1P53675 1640 aa24.57■■□□□ 1.52
TPGS2-220ENST00000610723 FOXD1Q16676 465 aa24.55■■□□□ 1.52
TPGS2-220ENST00000610723 PROSER2Q86WR7 435 aaPredicted RBP24.54■■□□□ 1.52
TPGS2-220ENST00000610723 TBX22Q9Y458 520 aa24.53■■□□□ 1.52
TPGS2-220ENST00000610723 SETD5Q9C0A6 1442 aa24.53■■□□□ 1.52
TPGS2-220ENST00000610723 RBM33Q96EV2 1170 aaKnown RBP24.52■■□□□ 1.52
TPGS2-220ENST00000610723 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
TPGS2-220ENST00000610723 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
TPGS2-220ENST00000610723 ADAMTS13Q76LX8 1427 aa24.51■■□□□ 1.51
TPGS2-220ENST00000610723 ALKQ9UM73 1620 aa24.49■■□□□ 1.51
TPGS2-220ENST00000610723 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
TPGS2-220ENST00000610723 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
TPGS2-220ENST00000610723 KIF1BO60333 1816 aa24.47■■□□□ 1.51
TPGS2-220ENST00000610723 XIRP1Q702N8 1843 aaKnown RBP24.47■■□□□ 1.51
TPGS2-220ENST00000610723 HSPA1LP34931 641 aa24.45■■□□□ 1.51
TPGS2-220ENST00000610723 DIP2AQ14689 1571 aa24.45■■□□□ 1.51
TPGS2-220ENST00000610723 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.5
TPGS2-220ENST00000610723 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
TPGS2-220ENST00000610723 CHD2O14647 1828 aaKnown RBP24.43■■□□□ 1.5
TPGS2-220ENST00000610723 NEXMIFQ5QGS0 1516 aa24.43■■□□□ 1.5
TPGS2-220ENST00000610723 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
TPGS2-220ENST00000610723 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
TPGS2-220ENST00000610723 AMOTL2Q9Y2J4 779 aa24.4■■□□□ 1.5
TPGS2-220ENST00000610723 SETBP1Q9Y6X0 1596 aa24.39■■□□□ 1.5
TPGS2-220ENST00000610723 NRXN3Q9Y4C0 1643 aa24.39■■□□□ 1.49
TPGS2-220ENST00000610723 VGFO15240 615 aaPredicted RBP24.38■■□□□ 1.49
TPGS2-220ENST00000610723 PTPRUQ92729 1446 aa24.38■■□□□ 1.49
TPGS2-220ENST00000610723 MSH6P52701 1360 aa24.38■■□□□ 1.49
TPGS2-220ENST00000610723 RPGRIP1LQ68CZ1 1315 aa24.37■■□□□ 1.49
TPGS2-220ENST00000610723 C14orf37Q86TY3 774 aa24.37■■□□□ 1.49
TPGS2-220ENST00000610723 RGL3Q3MIN7 710 aa24.36■■□□□ 1.49
TPGS2-220ENST00000610723 METP08581 1390 aa24.35■■□□□ 1.49
TPGS2-220ENST00000610723 DISP3Q9P2K9 1392 aa24.34■■□□□ 1.49
TPGS2-220ENST00000610723 NCOA3Q9Y6Q9 1424 aa24.3■■□□□ 1.48
TPGS2-220ENST00000610723 FAM135BQ49AJ0 1406 aa24.29■■□□□ 1.48
TPGS2-220ENST00000610723 SLAIN2Q9P270 581 aa24.28■■□□□ 1.48
TPGS2-220ENST00000610723 PPLO60437 1756 aa24.28■■□□□ 1.48
TPGS2-220ENST00000610723 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
TPGS2-220ENST00000610723 C19orf44Q9H6X5 657 aa24.27■■□□□ 1.48
TPGS2-220ENST00000610723 XRN1Q8IZH2 1706 aaKnown RBP24.26■■□□□ 1.47
TPGS2-220ENST00000610723 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
TPGS2-220ENST00000610723 ATF3P18847 181 aa24.25■■□□□ 1.47
TPGS2-220ENST00000610723 HRCP23327 699 aa24.25■■□□□ 1.47
TPGS2-220ENST00000610723 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
TPGS2-220ENST00000610723 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
TPGS2-220ENST00000610723 CADPS2Q86UW7 1296 aa24.22■■□□□ 1.47
TPGS2-220ENST00000610723 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
TPGS2-220ENST00000610723 SETD1AO15047 1707 aaKnown RBP24.19■■□□□ 1.46
TPGS2-220ENST00000610723 IFT172Q9UG01 1749 aa24.17■■□□□ 1.46
TPGS2-220ENST00000610723 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
TPGS2-220ENST00000610723 MED1Q15648 1581 aaPredicted RBP24.15■■□□□ 1.46
TPGS2-220ENST00000610723 DCCP43146 1447 aa24.13■■□□□ 1.45
TPGS2-220ENST00000610723 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
TPGS2-220ENST00000610723 ADGRL3Q9HAR2 1447 aa24.13■■□□□ 1.45
TPGS2-220ENST00000610723 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
TPGS2-220ENST00000610723 ILDR2Q71H61 639 aa24.12■■□□□ 1.45
TPGS2-220ENST00000610723 STK26Q9P289 416 aa24.12■■□□□ 1.45
TPGS2-220ENST00000610723 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
TPGS2-220ENST00000610723 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
TPGS2-220ENST00000610723 NALCNQ8IZF0 1738 aa24.09■■□□□ 1.45
TPGS2-220ENST00000610723 BRINP3Q76B58 766 aa24.08■■□□□ 1.44
TPGS2-220ENST00000610723 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.44
TPGS2-220ENST00000610723 MST1RQ04912 1400 aa24.07■■□□□ 1.44
TPGS2-220ENST00000610723 MYOM2P54296 1465 aa24.07■■□□□ 1.44
TPGS2-220ENST00000610723 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
TPGS2-220ENST00000610723 CFAP70Q5T0N1 1121 aa24.06■■□□□ 1.44
TPGS2-220ENST00000610723 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
TPGS2-220ENST00000610723 KDM2AQ9Y2K7 1162 aa24.06■■□□□ 1.44
TPGS2-220ENST00000610723 LRPPRCP42704 1394 aaKnown RBP24.05■■□□□ 1.44
TPGS2-220ENST00000610723 NRXN1Q9ULB1 1477 aa24.05■■□□□ 1.44
TPGS2-220ENST00000610723 ASXL1Q8IXJ9 1541 aa24.04■■□□□ 1.44
TPGS2-220ENST00000610723 DCAF11Q8TEB1 546 aa24.04■■□□□ 1.44
TPGS2-220ENST00000610723 WAPLQ7Z5K2 1190 aa24.03■■□□□ 1.44
TPGS2-220ENST00000610723 ABCC11Q96J66 1382 aa24.02■■□□□ 1.44
TPGS2-220ENST00000610723 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
TPGS2-220ENST00000610723 COL16A1Q07092 1604 aaPredicted RBP24■■□□□ 1.43
TPGS2-220ENST00000610723 AHDC1Q5TGY3 1603 aaPredicted RBP24■■□□□ 1.43
TPGS2-220ENST00000610723 JCADQ9P266 1359 aa24■■□□□ 1.43
TPGS2-220ENST00000610723 TECPR2O15040 1411 aa24■■□□□ 1.43
TPGS2-220ENST00000610723 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
TPGS2-220ENST00000610723 C1orf167Q5SNV9 1468 aa23.99■■□□□ 1.43
TPGS2-220ENST00000610723 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
TPGS2-220ENST00000610723 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
TPGS2-220ENST00000610723 LAMC1P11047 1609 aa23.97■■□□□ 1.43
TPGS2-220ENST00000610723 KNDC1Q76NI1 1749 aa23.95■■□□□ 1.43
TPGS2-220ENST00000610723 ORAI2Q96SN7 254 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms