RNA–Protein interactions for RNA: ENST00000610194.1

LINC00454-207, long intergenic non-protein coding RNA 454, humanhuman

TSL 5

Gene LINC00454, Length 710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-207ENST00000610194 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
LINC00454-207ENST00000610194 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
LINC00454-207ENST00000610194 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
LINC00454-207ENST00000610194 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
LINC00454-207ENST00000610194 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
LINC00454-207ENST00000610194 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
LINC00454-207ENST00000610194 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
LINC00454-207ENST00000610194 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
LINC00454-207ENST00000610194 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
LINC00454-207ENST00000610194 PPLO60437 1756 aa16.9■□□□□ 0.3
LINC00454-207ENST00000610194 NEXMIFQ5QGS0 1516 aa16.9■□□□□ 0.3
LINC00454-207ENST00000610194 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
LINC00454-207ENST00000610194 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
LINC00454-207ENST00000610194 SPATA31E1Q6ZUB1 1445 aa16.88■□□□□ 0.29
LINC00454-207ENST00000610194 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC00454-207ENST00000610194 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
LINC00454-207ENST00000610194 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
LINC00454-207ENST00000610194 MED14O60244 1454 aa16.87■□□□□ 0.29
LINC00454-207ENST00000610194 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
LINC00454-207ENST00000610194 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
LINC00454-207ENST00000610194 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
LINC00454-207ENST00000610194 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
LINC00454-207ENST00000610194 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
LINC00454-207ENST00000610194 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
LINC00454-207ENST00000610194 ADGRF5Q8IZF2 1346 aa16.81■□□□□ 0.28
LINC00454-207ENST00000610194 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
LINC00454-207ENST00000610194 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
LINC00454-207ENST00000610194 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
LINC00454-207ENST00000610194 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
LINC00454-207ENST00000610194 ADAMTS13Q76LX8 1427 aa16.78■□□□□ 0.28
LINC00454-207ENST00000610194 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.28
LINC00454-207ENST00000610194 DIP2AQ14689 1571 aa16.75■□□□□ 0.27
LINC00454-207ENST00000610194 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
LINC00454-207ENST00000610194 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
LINC00454-207ENST00000610194 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
LINC00454-207ENST00000610194 MYOM2P54296 1465 aa16.73■□□□□ 0.27
LINC00454-207ENST00000610194 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
LINC00454-207ENST00000610194 L3MBTL2Q969R5 705 aa16.73■□□□□ 0.27
LINC00454-207ENST00000610194 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
LINC00454-207ENST00000610194 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
LINC00454-207ENST00000610194 METP08581 1390 aa16.73■□□□□ 0.27
LINC00454-207ENST00000610194 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
LINC00454-207ENST00000610194 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
LINC00454-207ENST00000610194 KCNA6P17658 529 aa16.7■□□□□ 0.26
LINC00454-207ENST00000610194 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
LINC00454-207ENST00000610194 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
LINC00454-207ENST00000610194 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
LINC00454-207ENST00000610194 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
LINC00454-207ENST00000610194 STK26Q9P289 416 aa16.69■□□□□ 0.26
LINC00454-207ENST00000610194 AMOTL2Q9Y2J4 779 aa16.69■□□□□ 0.26
LINC00454-207ENST00000610194 CPS1P31327 1500 aa16.69■□□□□ 0.26
LINC00454-207ENST00000610194 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
LINC00454-207ENST00000610194 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
LINC00454-207ENST00000610194 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
LINC00454-207ENST00000610194 LAMC1P11047 1609 aa16.67■□□□□ 0.26
LINC00454-207ENST00000610194 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
LINC00454-207ENST00000610194 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
LINC00454-207ENST00000610194 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
LINC00454-207ENST00000610194 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
LINC00454-207ENST00000610194 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
LINC00454-207ENST00000610194 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
LINC00454-207ENST00000610194 PIK3R4Q99570 1358 aa16.64■□□□□ 0.26
LINC00454-207ENST00000610194 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
LINC00454-207ENST00000610194 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
LINC00454-207ENST00000610194 NKTRP30414 1462 aaKnown RBP16.63■□□□□ 0.25
LINC00454-207ENST00000610194 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
LINC00454-207ENST00000610194 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
LINC00454-207ENST00000610194 YTHDC2Q9H6S0 1430 aaKnown RBP16.61■□□□□ 0.25
LINC00454-207ENST00000610194 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
LINC00454-207ENST00000610194 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
LINC00454-207ENST00000610194 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
LINC00454-207ENST00000610194 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
LINC00454-207ENST00000610194 TRAK1Q9UPV9 953 aa16.59■□□□□ 0.25
LINC00454-207ENST00000610194 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
LINC00454-207ENST00000610194 TRPM1Q7Z4N2 1603 aa16.59■□□□□ 0.25
LINC00454-207ENST00000610194 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
LINC00454-207ENST00000610194 UBAP1LF5GYI3 381 aa16.58■□□□□ 0.24
LINC00454-207ENST00000610194 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00454-207ENST00000610194 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
LINC00454-207ENST00000610194 ADGRB1O14514 1584 aa16.58■□□□□ 0.24
LINC00454-207ENST00000610194 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
LINC00454-207ENST00000610194 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
LINC00454-207ENST00000610194 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
LINC00454-207ENST00000610194 PLEKHH1Q9ULM0 1364 aa16.55■□□□□ 0.24
LINC00454-207ENST00000610194 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
LINC00454-207ENST00000610194 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.55■□□□□ 0.24
LINC00454-207ENST00000610194 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
LINC00454-207ENST00000610194 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
LINC00454-207ENST00000610194 MSH6P52701 1360 aa16.54■□□□□ 0.24
LINC00454-207ENST00000610194 POGKQ9P215 609 aa16.54■□□□□ 0.24
LINC00454-207ENST00000610194 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
LINC00454-207ENST00000610194 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
LINC00454-207ENST00000610194 PRAM1Q96QH2 718 aa16.53■□□□□ 0.24
LINC00454-207ENST00000610194 TECPR2O15040 1411 aa16.52■□□□□ 0.23
LINC00454-207ENST00000610194 TOM1O60784 492 aa16.5■□□□□ 0.23
LINC00454-207ENST00000610194 ATF3P18847 181 aa16.5■□□□□ 0.23
LINC00454-207ENST00000610194 MINK1Q8N4C8 1332 aaPredicted RBP16.49■□□□□ 0.23
LINC00454-207ENST00000610194 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
LINC00454-207ENST00000610194 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
LINC00454-207ENST00000610194 ADGRL3Q9HAR2 1447 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms