RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TOM1O60784 492 aa22.64■■□□□ 1.21
LMBR1-220ENST00000609081 CHGAP10645 457 aaKnown RBP22.64■■□□□ 1.21
LMBR1-220ENST00000609081 TRIM52Q96A61 297 aa22.64■■□□□ 1.21
LMBR1-220ENST00000609081 TRPM2O94759 1503 aa22.63■■□□□ 1.21
LMBR1-220ENST00000609081 LRRC7Q96NW7 1537 aa22.63■■□□□ 1.21
LMBR1-220ENST00000609081 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
LMBR1-220ENST00000609081 KCNA6P17658 529 aa22.6■■□□□ 1.21
LMBR1-220ENST00000609081 BCANQ96GW7 911 aa22.59■■□□□ 1.21
LMBR1-220ENST00000609081 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
LMBR1-220ENST00000609081 SLC26A8Q96RN1 970 aa22.58■■□□□ 1.21
LMBR1-220ENST00000609081 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
LMBR1-220ENST00000609081 KIF1BO60333 1816 aa22.57■■□□□ 1.2
LMBR1-220ENST00000609081 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
LMBR1-220ENST00000609081 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
LMBR1-220ENST00000609081 TBX22Q9Y458 520 aa22.56■■□□□ 1.2
LMBR1-220ENST00000609081 CLTCL1P53675 1640 aa22.56■■□□□ 1.2
LMBR1-220ENST00000609081 PIK3R4Q99570 1358 aa22.53■■□□□ 1.2
LMBR1-220ENST00000609081 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
LMBR1-220ENST00000609081 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
LMBR1-220ENST00000609081 XIRP1Q702N8 1843 aaKnown RBP22.51■■□□□ 1.19
LMBR1-220ENST00000609081 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
LMBR1-220ENST00000609081 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
LMBR1-220ENST00000609081 TMEM94Q12767 1356 aa22.48■■□□□ 1.19
LMBR1-220ENST00000609081 SETBP1Q9Y6X0 1596 aa22.47■■□□□ 1.19
LMBR1-220ENST00000609081 ALKQ9UM73 1620 aa22.47■■□□□ 1.19
LMBR1-220ENST00000609081 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
LMBR1-220ENST00000609081 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
LMBR1-220ENST00000609081 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
LMBR1-220ENST00000609081 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
LMBR1-220ENST00000609081 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
LMBR1-220ENST00000609081 NEXMIFQ5QGS0 1516 aa22.46■■□□□ 1.19
LMBR1-220ENST00000609081 RPGRIP1LQ68CZ1 1315 aa22.45■■□□□ 1.18
LMBR1-220ENST00000609081 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
LMBR1-220ENST00000609081 CCDC144AA2RUR9 1427 aa22.43■■□□□ 1.18
LMBR1-220ENST00000609081 VGFO15240 615 aaPredicted RBP22.42■■□□□ 1.18
LMBR1-220ENST00000609081 NRXN3Q9Y4C0 1643 aa22.42■■□□□ 1.18
LMBR1-220ENST00000609081 MSH6P52701 1360 aa22.4■■□□□ 1.18
LMBR1-220ENST00000609081 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
LMBR1-220ENST00000609081 HRCP23327 699 aa22.39■■□□□ 1.17
LMBR1-220ENST00000609081 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
LMBR1-220ENST00000609081 HSPA1LP34931 641 aa22.37■■□□□ 1.17
LMBR1-220ENST00000609081 PPLO60437 1756 aa22.36■■□□□ 1.17
LMBR1-220ENST00000609081 FOXD1Q16676 465 aa22.36■■□□□ 1.17
LMBR1-220ENST00000609081 FAM135BQ49AJ0 1406 aa22.36■■□□□ 1.17
LMBR1-220ENST00000609081 AMOTL2Q9Y2J4 779 aa22.35■■□□□ 1.17
LMBR1-220ENST00000609081 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
LMBR1-220ENST00000609081 SPATA31E1Q6ZUB1 1445 aa22.32■■□□□ 1.16
LMBR1-220ENST00000609081 PTPRUQ92729 1446 aa22.32■■□□□ 1.16
LMBR1-220ENST00000609081 ANKRD30BQ9BXX2 1392 aa22.31■■□□□ 1.16
LMBR1-220ENST00000609081 METP08581 1390 aa22.3■■□□□ 1.16
LMBR1-220ENST00000609081 C14orf37Q86TY3 774 aa22.3■■□□□ 1.16
LMBR1-220ENST00000609081 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
LMBR1-220ENST00000609081 C19orf44Q9H6X5 657 aa22.3■■□□□ 1.16
LMBR1-220ENST00000609081 DISP3Q9P2K9 1392 aa22.28■■□□□ 1.16
LMBR1-220ENST00000609081 CADPS2Q86UW7 1296 aa22.28■■□□□ 1.16
LMBR1-220ENST00000609081 SETD1AO15047 1707 aaKnown RBP22.28■■□□□ 1.16
LMBR1-220ENST00000609081 IFT172Q9UG01 1749 aa22.28■■□□□ 1.16
LMBR1-220ENST00000609081 DCCP43146 1447 aa22.27■■□□□ 1.16
LMBR1-220ENST00000609081 SLAIN2Q9P270 581 aa22.27■■□□□ 1.16
LMBR1-220ENST00000609081 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
LMBR1-220ENST00000609081 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-220ENST00000609081 PRAG1Q86YV5 1406 aa22.26■■□□□ 1.15
LMBR1-220ENST00000609081 ATF3P18847 181 aa22.25■■□□□ 1.15
LMBR1-220ENST00000609081 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
LMBR1-220ENST00000609081 PTCH1Q13635 1447 aa22.23■■□□□ 1.15
LMBR1-220ENST00000609081 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
LMBR1-220ENST00000609081 ADGRL3Q9HAR2 1447 aa22.19■■□□□ 1.14
LMBR1-220ENST00000609081 MED1Q15648 1581 aaPredicted RBP22.18■■□□□ 1.14
LMBR1-220ENST00000609081 PIK3C2GO75747 1445 aa22.18■■□□□ 1.14
LMBR1-220ENST00000609081 MYOM2P54296 1465 aa22.17■■□□□ 1.14
LMBR1-220ENST00000609081 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
LMBR1-220ENST00000609081 LAMC1P11047 1609 aa22.15■■□□□ 1.14
LMBR1-220ENST00000609081 PHLPP1O60346 1717 aa22.14■■□□□ 1.14
LMBR1-220ENST00000609081 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.14
LMBR1-220ENST00000609081 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
LMBR1-220ENST00000609081 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
LMBR1-220ENST00000609081 TECPR2O15040 1411 aa22.12■■□□□ 1.13
LMBR1-220ENST00000609081 AHDC1Q5TGY3 1603 aaPredicted RBP22.11■■□□□ 1.13
LMBR1-220ENST00000609081 MST1RQ04912 1400 aa22.11■■□□□ 1.13
LMBR1-220ENST00000609081 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
LMBR1-220ENST00000609081 LRPPRCP42704 1394 aaKnown RBP22.11■■□□□ 1.13
LMBR1-220ENST00000609081 ABCC11Q96J66 1382 aa22.1■■□□□ 1.13
LMBR1-220ENST00000609081 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
LMBR1-220ENST00000609081 JCADQ9P266 1359 aa22.08■■□□□ 1.12
LMBR1-220ENST00000609081 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
LMBR1-220ENST00000609081 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
LMBR1-220ENST00000609081 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
LMBR1-220ENST00000609081 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
LMBR1-220ENST00000609081 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
LMBR1-220ENST00000609081 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
LMBR1-220ENST00000609081 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
LMBR1-220ENST00000609081 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
LMBR1-220ENST00000609081 NHSL1Q5SYE7 1610 aa22.02■■□□□ 1.12
LMBR1-220ENST00000609081 TMEM132EQ6IEE7 984 aa22.02■■□□□ 1.12
LMBR1-220ENST00000609081 STK26Q9P289 416 aa22.02■■□□□ 1.12
LMBR1-220ENST00000609081 C1orf167Q5SNV9 1468 aa22.02■■□□□ 1.12
LMBR1-220ENST00000609081 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
LMBR1-220ENST00000609081 ILDR2Q71H61 639 aa22■■□□□ 1.11
LMBR1-220ENST00000609081 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
LMBR1-220ENST00000609081 SHPRHQ149N8 1683 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms