RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TRPM2O94759 1503 aa21.71■■□□□ 1.07
HDDC2-204ENST00000608295 SLC26A8Q96RN1 970 aa21.71■■□□□ 1.07
HDDC2-204ENST00000608295 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
HDDC2-204ENST00000608295 IQSEC2Q5JU85 1478 aa21.71■■□□□ 1.07
HDDC2-204ENST00000608295 FOXD1Q16676 465 aa21.7■■□□□ 1.06
HDDC2-204ENST00000608295 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
HDDC2-204ENST00000608295 KIF1BO60333 1816 aa21.69■■□□□ 1.06
HDDC2-204ENST00000608295 UBAP1LF5GYI3 381 aa21.67■■□□□ 1.06
HDDC2-204ENST00000608295 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
HDDC2-204ENST00000608295 ZNF326Q5BKZ1 582 aaKnown RBP21.65■■□□□ 1.06
HDDC2-204ENST00000608295 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
HDDC2-204ENST00000608295 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.05
HDDC2-204ENST00000608295 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
HDDC2-204ENST00000608295 PLEKHG1Q9ULL1 1385 aa21.62■■□□□ 1.05
HDDC2-204ENST00000608295 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
HDDC2-204ENST00000608295 PIP4K2BP78356 416 aa21.6■■□□□ 1.05
HDDC2-204ENST00000608295 RBM33Q96EV2 1170 aaKnown RBP21.6■■□□□ 1.05
HDDC2-204ENST00000608295 NEXMIFQ5QGS0 1516 aa21.59■■□□□ 1.05
HDDC2-204ENST00000608295 NWD1Q149M9 1564 aa21.57■■□□□ 1.04
HDDC2-204ENST00000608295 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
HDDC2-204ENST00000608295 NRXN3Q9Y4C0 1643 aa21.57■■□□□ 1.04
HDDC2-204ENST00000608295 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
HDDC2-204ENST00000608295 MPHOSPH9Q99550 1183 aa21.56■■□□□ 1.04
HDDC2-204ENST00000608295 ALKQ9UM73 1620 aa21.55■■□□□ 1.04
HDDC2-204ENST00000608295 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
HDDC2-204ENST00000608295 ADAMTS13Q76LX8 1427 aa21.55■■□□□ 1.04
HDDC2-204ENST00000608295 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
HDDC2-204ENST00000608295 TMEM94Q12767 1356 aa21.52■■□□□ 1.04
HDDC2-204ENST00000608295 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
HDDC2-204ENST00000608295 PPLO60437 1756 aa21.51■■□□□ 1.03
HDDC2-204ENST00000608295 KCNA6P17658 529 aa21.51■■□□□ 1.03
HDDC2-204ENST00000608295 NKTRP30414 1462 aaKnown RBP21.51■■□□□ 1.03
HDDC2-204ENST00000608295 TOM1O60784 492 aa21.5■■□□□ 1.03
HDDC2-204ENST00000608295 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
HDDC2-204ENST00000608295 SETBP1Q9Y6X0 1596 aa21.49■■□□□ 1.03
HDDC2-204ENST00000608295 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
HDDC2-204ENST00000608295 RGL3Q3MIN7 710 aa21.45■■□□□ 1.02
HDDC2-204ENST00000608295 TBX22Q9Y458 520 aa21.45■■□□□ 1.02
HDDC2-204ENST00000608295 IFT172Q9UG01 1749 aa21.44■■□□□ 1.02
HDDC2-204ENST00000608295 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
HDDC2-204ENST00000608295 SETD1AO15047 1707 aaKnown RBP21.43■■□□□ 1.02
HDDC2-204ENST00000608295 METP08581 1390 aa21.42■■□□□ 1.02
HDDC2-204ENST00000608295 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
HDDC2-204ENST00000608295 HSPA1LP34931 641 aa21.41■■□□□ 1.02
HDDC2-204ENST00000608295 SPATA31E1Q6ZUB1 1445 aa21.39■■□□□ 1.02
HDDC2-204ENST00000608295 AMOTL2Q9Y2J4 779 aa21.39■■□□□ 1.01
HDDC2-204ENST00000608295 MSH6P52701 1360 aa21.38■■□□□ 1.01
HDDC2-204ENST00000608295 ROBO1Q9Y6N7 1651 aa21.37■■□□□ 1.01
HDDC2-204ENST00000608295 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
HDDC2-204ENST00000608295 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
HDDC2-204ENST00000608295 ADGRF5Q8IZF2 1346 aa21.35■■□□□ 1.01
HDDC2-204ENST00000608295 VGFO15240 615 aaPredicted RBP21.35■■□□□ 1.01
HDDC2-204ENST00000608295 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1.01
HDDC2-204ENST00000608295 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
HDDC2-204ENST00000608295 NALCNQ8IZF0 1738 aa21.33■■□□□ 1.01
HDDC2-204ENST00000608295 ANKRD30BQ9BXX2 1392 aa21.3■■□□□ 1
HDDC2-204ENST00000608295 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
HDDC2-204ENST00000608295 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
HDDC2-204ENST00000608295 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
HDDC2-204ENST00000608295 PHLPP1O60346 1717 aa21.26■□□□□ 0.99
HDDC2-204ENST00000608295 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
HDDC2-204ENST00000608295 ROBO2Q9HCK4 1378 aa21.24■□□□□ 0.99
HDDC2-204ENST00000608295 ATF3P18847 181 aa21.24■□□□□ 0.99
HDDC2-204ENST00000608295 STK26Q9P289 416 aa21.24■□□□□ 0.99
HDDC2-204ENST00000608295 TMEM132EQ6IEE7 984 aa21.23■□□□□ 0.99
HDDC2-204ENST00000608295 SLAIN2Q9P270 581 aa21.23■□□□□ 0.99
HDDC2-204ENST00000608295 MYOM2P54296 1465 aa21.23■□□□□ 0.99
HDDC2-204ENST00000608295 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
HDDC2-204ENST00000608295 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
HDDC2-204ENST00000608295 ADGRL3Q9HAR2 1447 aa21.22■□□□□ 0.99
HDDC2-204ENST00000608295 NCOA3Q9Y6Q9 1424 aa21.22■□□□□ 0.99
HDDC2-204ENST00000608295 HRCP23327 699 aa21.22■□□□□ 0.99
HDDC2-204ENST00000608295 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
HDDC2-204ENST00000608295 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
HDDC2-204ENST00000608295 LAMC1P11047 1609 aa21.21■□□□□ 0.99
HDDC2-204ENST00000608295 KNDC1Q76NI1 1749 aa21.2■□□□□ 0.98
HDDC2-204ENST00000608295 CADPS2Q86UW7 1296 aa21.19■□□□□ 0.98
HDDC2-204ENST00000608295 NRXN1Q9ULB1 1477 aa21.18■□□□□ 0.98
HDDC2-204ENST00000608295 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
HDDC2-204ENST00000608295 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
HDDC2-204ENST00000608295 DCCP43146 1447 aa21.17■□□□□ 0.98
HDDC2-204ENST00000608295 MST1RQ04912 1400 aa21.17■□□□□ 0.98
HDDC2-204ENST00000608295 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
HDDC2-204ENST00000608295 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
HDDC2-204ENST00000608295 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.98
HDDC2-204ENST00000608295 PLEKHH1Q9ULM0 1364 aa21.14■□□□□ 0.98
HDDC2-204ENST00000608295 WAPLQ7Z5K2 1190 aa21.13■□□□□ 0.97
HDDC2-204ENST00000608295 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
HDDC2-204ENST00000608295 BRINP3Q76B58 766 aa21.12■□□□□ 0.97
HDDC2-204ENST00000608295 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
HDDC2-204ENST00000608295 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
HDDC2-204ENST00000608295 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
HDDC2-204ENST00000608295 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
HDDC2-204ENST00000608295 TECPR2O15040 1411 aa21.1■□□□□ 0.97
HDDC2-204ENST00000608295 CDC42BPGQ6DT37 1551 aa21.1■□□□□ 0.97
HDDC2-204ENST00000608295 NHSL1Q5SYE7 1610 aa21.09■□□□□ 0.97
HDDC2-204ENST00000608295 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
HDDC2-204ENST00000608295 C14orf93Q9H972 538 aaKnown RBP21.09■□□□□ 0.97
HDDC2-204ENST00000608295 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
HDDC2-204ENST00000608295 ADGRB1O14514 1584 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms