RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
TMEM259-212ENST00000607316 MPHOSPH9Q99550 1183 aa20.34■□□□□ 0.85
TMEM259-212ENST00000607316 STRCP1A6NGW2 1772 aa20.33■□□□□ 0.84
TMEM259-212ENST00000607316 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
TMEM259-212ENST00000607316 KIF1BO60333 1816 aa20.27■□□□□ 0.84
TMEM259-212ENST00000607316 PPP1R15AO75807 674 aaPredicted RBP20.27■□□□□ 0.84
TMEM259-212ENST00000607316 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
TMEM259-212ENST00000607316 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
TMEM259-212ENST00000607316 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
TMEM259-212ENST00000607316 BCANQ96GW7 911 aa20.25■□□□□ 0.83
TMEM259-212ENST00000607316 CPS1P31327 1500 aa20.25■□□□□ 0.83
TMEM259-212ENST00000607316 NEXMIFQ5QGS0 1516 aa20.25■□□□□ 0.83
TMEM259-212ENST00000607316 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
TMEM259-212ENST00000607316 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
TMEM259-212ENST00000607316 NRXN3Q9Y4C0 1643 aa20.21■□□□□ 0.83
TMEM259-212ENST00000607316 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
TMEM259-212ENST00000607316 IQSEC2Q5JU85 1478 aa20.21■□□□□ 0.83
TMEM259-212ENST00000607316 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
TMEM259-212ENST00000607316 HDGFP51858 240 aaKnown RBP20.19■□□□□ 0.82
TMEM259-212ENST00000607316 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
TMEM259-212ENST00000607316 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
TMEM259-212ENST00000607316 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
TMEM259-212ENST00000607316 HRCP23327 699 aa20.16■□□□□ 0.82
TMEM259-212ENST00000607316 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
TMEM259-212ENST00000607316 PPLO60437 1756 aa20.16■□□□□ 0.82
TMEM259-212ENST00000607316 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
TMEM259-212ENST00000607316 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
TMEM259-212ENST00000607316 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
TMEM259-212ENST00000607316 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
TMEM259-212ENST00000607316 KCNA6P17658 529 aa20.13■□□□□ 0.81
TMEM259-212ENST00000607316 TBX22Q9Y458 520 aa20.13■□□□□ 0.81
TMEM259-212ENST00000607316 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
TMEM259-212ENST00000607316 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
TMEM259-212ENST00000607316 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
TMEM259-212ENST00000607316 IFT172Q9UG01 1749 aa20.12■□□□□ 0.81
TMEM259-212ENST00000607316 ALKQ9UM73 1620 aa20.12■□□□□ 0.81
TMEM259-212ENST00000607316 PTPRUQ92729 1446 aa20.11■□□□□ 0.81
TMEM259-212ENST00000607316 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
TMEM259-212ENST00000607316 METP08581 1390 aa20.09■□□□□ 0.81
TMEM259-212ENST00000607316 TMEM94Q12767 1356 aa20.09■□□□□ 0.81
TMEM259-212ENST00000607316 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
TMEM259-212ENST00000607316 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
TMEM259-212ENST00000607316 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
TMEM259-212ENST00000607316 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
TMEM259-212ENST00000607316 PROSER2Q86WR7 435 aaPredicted RBP20.06■□□□□ 0.8
TMEM259-212ENST00000607316 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
TMEM259-212ENST00000607316 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
TMEM259-212ENST00000607316 PIK3R4Q99570 1358 aa20.04■□□□□ 0.8
TMEM259-212ENST00000607316 PIP4K2BP78356 416 aa20.03■□□□□ 0.8
TMEM259-212ENST00000607316 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
TMEM259-212ENST00000607316 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
TMEM259-212ENST00000607316 TOM1O60784 492 aa20■□□□□ 0.79
TMEM259-212ENST00000607316 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
TMEM259-212ENST00000607316 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
TMEM259-212ENST00000607316 MYOM2P54296 1465 aa19.98■□□□□ 0.79
TMEM259-212ENST00000607316 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
TMEM259-212ENST00000607316 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
TMEM259-212ENST00000607316 MSH6P52701 1360 aa19.94■□□□□ 0.78
TMEM259-212ENST00000607316 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
TMEM259-212ENST00000607316 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
TMEM259-212ENST00000607316 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
TMEM259-212ENST00000607316 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
TMEM259-212ENST00000607316 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
TMEM259-212ENST00000607316 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
TMEM259-212ENST00000607316 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
TMEM259-212ENST00000607316 HSPA1LP34931 641 aa19.9■□□□□ 0.78
TMEM259-212ENST00000607316 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
TMEM259-212ENST00000607316 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
TMEM259-212ENST00000607316 PTCH1Q13635 1447 aa19.9■□□□□ 0.78
TMEM259-212ENST00000607316 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
TMEM259-212ENST00000607316 STK26Q9P289 416 aa19.89■□□□□ 0.77
TMEM259-212ENST00000607316 ROBO1Q9Y6N7 1651 aa19.88■□□□□ 0.77
TMEM259-212ENST00000607316 PRAG1Q86YV5 1406 aa19.88■□□□□ 0.77
TMEM259-212ENST00000607316 LAMC1P11047 1609 aa19.87■□□□□ 0.77
TMEM259-212ENST00000607316 C14orf93Q9H972 538 aaKnown RBP19.87■□□□□ 0.77
TMEM259-212ENST00000607316 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
TMEM259-212ENST00000607316 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
TMEM259-212ENST00000607316 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
TMEM259-212ENST00000607316 C19orf44Q9H6X5 657 aa19.85■□□□□ 0.77
TMEM259-212ENST00000607316 YTHDC2Q9H6S0 1430 aaKnown RBP19.85■□□□□ 0.77
TMEM259-212ENST00000607316 PLEKHH1Q9ULM0 1364 aa19.84■□□□□ 0.77
TMEM259-212ENST00000607316 ADGRB1O14514 1584 aa19.84■□□□□ 0.77
TMEM259-212ENST00000607316 TECPR2O15040 1411 aa19.84■□□□□ 0.77
TMEM259-212ENST00000607316 NEUROD1Q13562 356 aa19.83■□□□□ 0.77
TMEM259-212ENST00000607316 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
TMEM259-212ENST00000607316 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
TMEM259-212ENST00000607316 ATF3P18847 181 aa19.82■□□□□ 0.76
TMEM259-212ENST00000607316 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
TMEM259-212ENST00000607316 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
TMEM259-212ENST00000607316 CADPS2Q86UW7 1296 aa19.81■□□□□ 0.76
TMEM259-212ENST00000607316 DCCP43146 1447 aa19.81■□□□□ 0.76
TMEM259-212ENST00000607316 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
TMEM259-212ENST00000607316 MST1RQ04912 1400 aa19.8■□□□□ 0.76
TMEM259-212ENST00000607316 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
TMEM259-212ENST00000607316 CDC42BPGQ6DT37 1551 aa19.74■□□□□ 0.75
TMEM259-212ENST00000607316 SAFB2Q14151 953 aaKnown RBP eCLIP19.74■□□□□ 0.75
TMEM259-212ENST00000607316 BRINP3Q76B58 766 aa19.74■□□□□ 0.75
TMEM259-212ENST00000607316 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
TMEM259-212ENST00000607316 PHLPP1O60346 1717 aa19.73■□□□□ 0.75
TMEM259-212ENST00000607316 STAC3Q96MF2 364 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms