RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
SHROOM1-207ENST00000606676 CLTCL1P53675 1640 aa19.07■□□□□ 0.64
SHROOM1-207ENST00000606676 IQSEC2Q5JU85 1478 aa19.06■□□□□ 0.64
SHROOM1-207ENST00000606676 HDGFP51858 240 aaKnown RBP19.06■□□□□ 0.64
SHROOM1-207ENST00000606676 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHROOM1-207ENST00000606676 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
SHROOM1-207ENST00000606676 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
SHROOM1-207ENST00000606676 CPS1P31327 1500 aa19.05■□□□□ 0.64
SHROOM1-207ENST00000606676 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
SHROOM1-207ENST00000606676 PPP1R15AO75807 674 aaPredicted RBP19.03■□□□□ 0.64
SHROOM1-207ENST00000606676 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
SHROOM1-207ENST00000606676 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.64
SHROOM1-207ENST00000606676 HRCP23327 699 aa19.02■□□□□ 0.64
SHROOM1-207ENST00000606676 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
SHROOM1-207ENST00000606676 BCANQ96GW7 911 aa19■□□□□ 0.63
SHROOM1-207ENST00000606676 TBX22Q9Y458 520 aa18.98■□□□□ 0.63
SHROOM1-207ENST00000606676 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
SHROOM1-207ENST00000606676 ADAMTS13Q76LX8 1427 aa18.98■□□□□ 0.63
SHROOM1-207ENST00000606676 KCNA6P17658 529 aa18.97■□□□□ 0.63
SHROOM1-207ENST00000606676 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
SHROOM1-207ENST00000606676 CCDC144AA2RUR9 1427 aa18.95■□□□□ 0.62
SHROOM1-207ENST00000606676 KIF1BO60333 1816 aa18.95■□□□□ 0.62
SHROOM1-207ENST00000606676 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
SHROOM1-207ENST00000606676 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
SHROOM1-207ENST00000606676 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
SHROOM1-207ENST00000606676 NWD1Q149M9 1564 aa18.91■□□□□ 0.62
SHROOM1-207ENST00000606676 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
SHROOM1-207ENST00000606676 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
SHROOM1-207ENST00000606676 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
SHROOM1-207ENST00000606676 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-207ENST00000606676 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
SHROOM1-207ENST00000606676 ANKRD30BQ9BXX2 1392 aa18.89■□□□□ 0.61
SHROOM1-207ENST00000606676 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
SHROOM1-207ENST00000606676 PROSER2Q86WR7 435 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-207ENST00000606676 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
SHROOM1-207ENST00000606676 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-207ENST00000606676 CHD2O14647 1828 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-207ENST00000606676 PTPRUQ92729 1446 aa18.87■□□□□ 0.61
SHROOM1-207ENST00000606676 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-207ENST00000606676 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
SHROOM1-207ENST00000606676 TOM1O60784 492 aa18.86■□□□□ 0.61
SHROOM1-207ENST00000606676 METP08581 1390 aa18.85■□□□□ 0.61
SHROOM1-207ENST00000606676 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
SHROOM1-207ENST00000606676 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
SHROOM1-207ENST00000606676 PPLO60437 1756 aa18.83■□□□□ 0.61
SHROOM1-207ENST00000606676 ADGRF5Q8IZF2 1346 aa18.83■□□□□ 0.61
SHROOM1-207ENST00000606676 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
SHROOM1-207ENST00000606676 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
SHROOM1-207ENST00000606676 IFT172Q9UG01 1749 aa18.78■□□□□ 0.6
SHROOM1-207ENST00000606676 NCOA3Q9Y6Q9 1424 aa18.78■□□□□ 0.6
SHROOM1-207ENST00000606676 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
SHROOM1-207ENST00000606676 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
SHROOM1-207ENST00000606676 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
SHROOM1-207ENST00000606676 PIK3C2GO75747 1445 aa18.75■□□□□ 0.59
SHROOM1-207ENST00000606676 MSH6P52701 1360 aa18.75■□□□□ 0.59
SHROOM1-207ENST00000606676 NRXN1Q9ULB1 1477 aa18.73■□□□□ 0.59
SHROOM1-207ENST00000606676 HSPA1LP34931 641 aa18.73■□□□□ 0.59
SHROOM1-207ENST00000606676 MYOM2P54296 1465 aa18.72■□□□□ 0.59
SHROOM1-207ENST00000606676 C19orf44Q9H6X5 657 aa18.72■□□□□ 0.59
SHROOM1-207ENST00000606676 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
SHROOM1-207ENST00000606676 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
SHROOM1-207ENST00000606676 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
SHROOM1-207ENST00000606676 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
SHROOM1-207ENST00000606676 FAM135BQ49AJ0 1406 aa18.7■□□□□ 0.58
SHROOM1-207ENST00000606676 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
SHROOM1-207ENST00000606676 PTCH1Q13635 1447 aa18.69■□□□□ 0.58
SHROOM1-207ENST00000606676 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
SHROOM1-207ENST00000606676 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
SHROOM1-207ENST00000606676 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
SHROOM1-207ENST00000606676 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
SHROOM1-207ENST00000606676 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
SHROOM1-207ENST00000606676 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
SHROOM1-207ENST00000606676 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-207ENST00000606676 ATF3P18847 181 aa18.66■□□□□ 0.58
SHROOM1-207ENST00000606676 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
SHROOM1-207ENST00000606676 LRPPRCP42704 1394 aaKnown RBP18.66■□□□□ 0.58
SHROOM1-207ENST00000606676 STAC3Q96MF2 364 aa18.65■□□□□ 0.58
SHROOM1-207ENST00000606676 STK26Q9P289 416 aa18.65■□□□□ 0.58
SHROOM1-207ENST00000606676 TECPR2O15040 1411 aa18.65■□□□□ 0.58
SHROOM1-207ENST00000606676 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
SHROOM1-207ENST00000606676 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
SHROOM1-207ENST00000606676 DCCP43146 1447 aa18.64■□□□□ 0.57
SHROOM1-207ENST00000606676 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
SHROOM1-207ENST00000606676 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
SHROOM1-207ENST00000606676 ROBO1Q9Y6N7 1651 aa18.62■□□□□ 0.57
SHROOM1-207ENST00000606676 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
SHROOM1-207ENST00000606676 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
SHROOM1-207ENST00000606676 LAMC1P11047 1609 aa18.6■□□□□ 0.57
SHROOM1-207ENST00000606676 MST1RQ04912 1400 aa18.59■□□□□ 0.57
SHROOM1-207ENST00000606676 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.57
SHROOM1-207ENST00000606676 SIRT1Q96EB6 747 aa18.58■□□□□ 0.56
SHROOM1-207ENST00000606676 ADGRB1O14514 1584 aa18.58■□□□□ 0.56
SHROOM1-207ENST00000606676 BRINP3Q76B58 766 aa18.56■□□□□ 0.56
SHROOM1-207ENST00000606676 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
SHROOM1-207ENST00000606676 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
SHROOM1-207ENST00000606676 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
SHROOM1-207ENST00000606676 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
SHROOM1-207ENST00000606676 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
SHROOM1-207ENST00000606676 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
SHROOM1-207ENST00000606676 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms