RNA–Protein interactions for RNA: ENST00000606576.1

LCE1C-201, Transcript of late cornified envelope 1C, humanhuman

APPRIS ALT2 TSL 3

Gene LCE1C, Length 211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1C-201ENST00000606576 TRPM2O94759 1503 aa24.81■■□□□ 1.56
LCE1C-201ENST00000606576 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
LCE1C-201ENST00000606576 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
LCE1C-201ENST00000606576 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
LCE1C-201ENST00000606576 SLC26A8Q96RN1 970 aa24.76■■□□□ 1.55
LCE1C-201ENST00000606576 CPS1P31327 1500 aa24.73■■□□□ 1.55
LCE1C-201ENST00000606576 IQSEC2Q5JU85 1478 aa24.73■■□□□ 1.55
LCE1C-201ENST00000606576 PLEKHG1Q9ULL1 1385 aa24.72■■□□□ 1.55
LCE1C-201ENST00000606576 PPP1R15AO75807 674 aaPredicted RBP24.71■■□□□ 1.55
LCE1C-201ENST00000606576 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.69■■□□□ 1.54
LCE1C-201ENST00000606576 BCANQ96GW7 911 aa24.69■■□□□ 1.54
LCE1C-201ENST00000606576 KIF1BO60333 1816 aa24.68■■□□□ 1.54
LCE1C-201ENST00000606576 HDGFP51858 240 aaKnown RBP24.68■■□□□ 1.54
LCE1C-201ENST00000606576 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
LCE1C-201ENST00000606576 LRRC7Q96NW7 1537 aa24.67■■□□□ 1.54
LCE1C-201ENST00000606576 ADAMTS13Q76LX8 1427 aa24.66■■□□□ 1.54
LCE1C-201ENST00000606576 NEXMIFQ5QGS0 1516 aa24.65■■□□□ 1.54
LCE1C-201ENST00000606576 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
LCE1C-201ENST00000606576 KCNA6P17658 529 aa24.62■■□□□ 1.53
LCE1C-201ENST00000606576 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
LCE1C-201ENST00000606576 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
LCE1C-201ENST00000606576 UBAP1LF5GYI3 381 aa24.6■■□□□ 1.53
LCE1C-201ENST00000606576 HRCP23327 699 aa24.6■■□□□ 1.53
LCE1C-201ENST00000606576 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
LCE1C-201ENST00000606576 CCDC144AA2RUR9 1427 aa24.6■■□□□ 1.53
LCE1C-201ENST00000606576 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
LCE1C-201ENST00000606576 RBM33Q96EV2 1170 aaKnown RBP24.58■■□□□ 1.53
LCE1C-201ENST00000606576 CHD2O14647 1828 aaKnown RBP24.58■■□□□ 1.53
LCE1C-201ENST00000606576 ALKQ9UM73 1620 aa24.57■■□□□ 1.52
LCE1C-201ENST00000606576 SETBP1Q9Y6X0 1596 aa24.56■■□□□ 1.52
LCE1C-201ENST00000606576 SPATA31E1Q6ZUB1 1445 aa24.56■■□□□ 1.52
LCE1C-201ENST00000606576 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
LCE1C-201ENST00000606576 RGL3Q3MIN7 710 aa24.54■■□□□ 1.52
LCE1C-201ENST00000606576 PTPRUQ92729 1446 aa24.53■■□□□ 1.52
LCE1C-201ENST00000606576 PPLO60437 1756 aa24.53■■□□□ 1.52
LCE1C-201ENST00000606576 TMEM94Q12767 1356 aa24.53■■□□□ 1.52
LCE1C-201ENST00000606576 PROSER2Q86WR7 435 aaPredicted RBP24.52■■□□□ 1.52
LCE1C-201ENST00000606576 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
LCE1C-201ENST00000606576 METP08581 1390 aa24.51■■□□□ 1.51
LCE1C-201ENST00000606576 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
LCE1C-201ENST00000606576 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
LCE1C-201ENST00000606576 VGFO15240 615 aaPredicted RBP24.49■■□□□ 1.51
LCE1C-201ENST00000606576 TOM1O60784 492 aa24.48■■□□□ 1.51
LCE1C-201ENST00000606576 PIP4K2BP78356 416 aa24.48■■□□□ 1.51
LCE1C-201ENST00000606576 PIK3R4Q99570 1358 aa24.48■■□□□ 1.51
LCE1C-201ENST00000606576 ADGRF5Q8IZF2 1346 aa24.47■■□□□ 1.51
LCE1C-201ENST00000606576 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
LCE1C-201ENST00000606576 IFT172Q9UG01 1749 aa24.47■■□□□ 1.51
LCE1C-201ENST00000606576 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
LCE1C-201ENST00000606576 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
LCE1C-201ENST00000606576 XRN1Q8IZH2 1706 aaKnown RBP24.43■■□□□ 1.5
LCE1C-201ENST00000606576 HSPA1LP34931 641 aa24.35■■□□□ 1.49
LCE1C-201ENST00000606576 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
LCE1C-201ENST00000606576 MSH6P52701 1360 aa24.34■■□□□ 1.49
LCE1C-201ENST00000606576 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
LCE1C-201ENST00000606576 NCOA3Q9Y6Q9 1424 aa24.34■■□□□ 1.49
LCE1C-201ENST00000606576 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.31■■□□□ 1.48
LCE1C-201ENST00000606576 NRXN1Q9ULB1 1477 aa24.31■■□□□ 1.48
LCE1C-201ENST00000606576 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
LCE1C-201ENST00000606576 ROBO2Q9HCK4 1378 aa24.3■■□□□ 1.48
LCE1C-201ENST00000606576 C14orf37Q86TY3 774 aa24.3■■□□□ 1.48
LCE1C-201ENST00000606576 MYOM2P54296 1465 aa24.3■■□□□ 1.48
LCE1C-201ENST00000606576 TMEM132EQ6IEE7 984 aa24.29■■□□□ 1.48
LCE1C-201ENST00000606576 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
LCE1C-201ENST00000606576 C19orf44Q9H6X5 657 aa24.28■■□□□ 1.48
LCE1C-201ENST00000606576 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
LCE1C-201ENST00000606576 CFAP70Q5T0N1 1121 aa24.26■■□□□ 1.47
LCE1C-201ENST00000606576 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
LCE1C-201ENST00000606576 KDM2AQ9Y2K7 1162 aa24.26■■□□□ 1.47
LCE1C-201ENST00000606576 ROBO1Q9Y6N7 1651 aa24.25■■□□□ 1.47
LCE1C-201ENST00000606576 DCAF11Q8TEB1 546 aa24.25■■□□□ 1.47
LCE1C-201ENST00000606576 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
LCE1C-201ENST00000606576 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
LCE1C-201ENST00000606576 PRAG1Q86YV5 1406 aa24.25■■□□□ 1.47
LCE1C-201ENST00000606576 STK26Q9P289 416 aa24.24■■□□□ 1.47
LCE1C-201ENST00000606576 NALCNQ8IZF0 1738 aa24.24■■□□□ 1.47
LCE1C-201ENST00000606576 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
LCE1C-201ENST00000606576 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
LCE1C-201ENST00000606576 ATF3P18847 181 aa24.21■■□□□ 1.47
LCE1C-201ENST00000606576 CADPS2Q86UW7 1296 aa24.21■■□□□ 1.47
LCE1C-201ENST00000606576 SIN3AQ96ST3 1273 aa24.2■■□□□ 1.46
LCE1C-201ENST00000606576 TECPR2O15040 1411 aa24.18■■□□□ 1.46
LCE1C-201ENST00000606576 DCCP43146 1447 aa24.18■■□□□ 1.46
LCE1C-201ENST00000606576 YTHDC2Q9H6S0 1430 aaKnown RBP24.18■■□□□ 1.46
LCE1C-201ENST00000606576 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
LCE1C-201ENST00000606576 ABCC11Q96J66 1382 aa24.17■■□□□ 1.46
LCE1C-201ENST00000606576 LAMC1P11047 1609 aa24.17■■□□□ 1.46
LCE1C-201ENST00000606576 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
LCE1C-201ENST00000606576 MST1RQ04912 1400 aa24.16■■□□□ 1.46
LCE1C-201ENST00000606576 KNDC1Q76NI1 1749 aa24.15■■□□□ 1.46
LCE1C-201ENST00000606576 ADGRB1O14514 1584 aa24.14■■□□□ 1.45
LCE1C-201ENST00000606576 BRINP3Q76B58 766 aa24.12■■□□□ 1.45
LCE1C-201ENST00000606576 STAC3Q96MF2 364 aa24.12■■□□□ 1.45
LCE1C-201ENST00000606576 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
LCE1C-201ENST00000606576 PHLPP1O60346 1717 aa24.08■■□□□ 1.45
LCE1C-201ENST00000606576 L3MBTL2Q969R5 705 aa24.08■■□□□ 1.45
LCE1C-201ENST00000606576 SIRT1Q96EB6 747 aa24.07■■□□□ 1.44
LCE1C-201ENST00000606576 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
LCE1C-201ENST00000606576 PRAM1Q96QH2 718 aa24.05■■□□□ 1.44
LCE1C-201ENST00000606576 TRAK1Q9UPV9 953 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms