RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
TUBE1-210ENST00000604967 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
TUBE1-210ENST00000604967 XIRP1Q702N8 1843 aaKnown RBP16.14■□□□□ 0.17
TUBE1-210ENST00000604967 FOXD1Q16676 465 aa16.13■□□□□ 0.17
TUBE1-210ENST00000604967 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
TUBE1-210ENST00000604967 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
TUBE1-210ENST00000604967 TRPM2O94759 1503 aa16.12■□□□□ 0.17
TUBE1-210ENST00000604967 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
TUBE1-210ENST00000604967 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
TUBE1-210ENST00000604967 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
TUBE1-210ENST00000604967 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
TUBE1-210ENST00000604967 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
TUBE1-210ENST00000604967 KCNA6P17658 529 aa16.07■□□□□ 0.16
TUBE1-210ENST00000604967 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
TUBE1-210ENST00000604967 NEXMIFQ5QGS0 1516 aa16.07■□□□□ 0.16
TUBE1-210ENST00000604967 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
TUBE1-210ENST00000604967 SETD5Q9C0A6 1442 aa16.05■□□□□ 0.16
TUBE1-210ENST00000604967 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
TUBE1-210ENST00000604967 PIP4K2BP78356 416 aa16.05■□□□□ 0.16
TUBE1-210ENST00000604967 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
TUBE1-210ENST00000604967 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-210ENST00000604967 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
TUBE1-210ENST00000604967 RAB3GAP2Q9H2M9 1393 aa16.03■□□□□ 0.16
TUBE1-210ENST00000604967 HSPA1LP34931 641 aa16.03■□□□□ 0.16
TUBE1-210ENST00000604967 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
TUBE1-210ENST00000604967 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
TUBE1-210ENST00000604967 BCANQ96GW7 911 aa16.02■□□□□ 0.16
TUBE1-210ENST00000604967 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
TUBE1-210ENST00000604967 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
TUBE1-210ENST00000604967 METP08581 1390 aa16■□□□□ 0.15
TUBE1-210ENST00000604967 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
TUBE1-210ENST00000604967 TOM1O60784 492 aa15.99■□□□□ 0.15
TUBE1-210ENST00000604967 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
TUBE1-210ENST00000604967 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
TUBE1-210ENST00000604967 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
TUBE1-210ENST00000604967 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
TUBE1-210ENST00000604967 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
TUBE1-210ENST00000604967 KIF1BO60333 1816 aa15.98■□□□□ 0.15
TUBE1-210ENST00000604967 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
TUBE1-210ENST00000604967 XRN1Q8IZH2 1706 aaKnown RBP15.97■□□□□ 0.15
TUBE1-210ENST00000604967 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
TUBE1-210ENST00000604967 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
TUBE1-210ENST00000604967 PPLO60437 1756 aa15.94■□□□□ 0.14
TUBE1-210ENST00000604967 ADGRF5Q8IZF2 1346 aa15.93■□□□□ 0.14
TUBE1-210ENST00000604967 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
TUBE1-210ENST00000604967 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
TUBE1-210ENST00000604967 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
TUBE1-210ENST00000604967 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
TUBE1-210ENST00000604967 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
TUBE1-210ENST00000604967 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
TUBE1-210ENST00000604967 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
TUBE1-210ENST00000604967 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
TUBE1-210ENST00000604967 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-210ENST00000604967 ILDR2Q71H61 639 aa15.88■□□□□ 0.13
TUBE1-210ENST00000604967 MSH6P52701 1360 aa15.87■□□□□ 0.13
TUBE1-210ENST00000604967 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
TUBE1-210ENST00000604967 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
TUBE1-210ENST00000604967 NCOA3Q9Y6Q9 1424 aa15.86■□□□□ 0.13
TUBE1-210ENST00000604967 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
TUBE1-210ENST00000604967 SLAIN2Q9P270 581 aa15.86■□□□□ 0.13
TUBE1-210ENST00000604967 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
TUBE1-210ENST00000604967 HRCP23327 699 aa15.84■□□□□ 0.13
TUBE1-210ENST00000604967 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
TUBE1-210ENST00000604967 PRAG1Q86YV5 1406 aa15.84■□□□□ 0.13
TUBE1-210ENST00000604967 NALCNQ8IZF0 1738 aa15.83■□□□□ 0.13
TUBE1-210ENST00000604967 C19orf44Q9H6X5 657 aa15.83■□□□□ 0.12
TUBE1-210ENST00000604967 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
TUBE1-210ENST00000604967 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
TUBE1-210ENST00000604967 ADGRL3Q9HAR2 1447 aa15.81■□□□□ 0.12
TUBE1-210ENST00000604967 MST1RQ04912 1400 aa15.8■□□□□ 0.12
TUBE1-210ENST00000604967 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
TUBE1-210ENST00000604967 C14orf37Q86TY3 774 aa15.8■□□□□ 0.12
TUBE1-210ENST00000604967 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
TUBE1-210ENST00000604967 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
TUBE1-210ENST00000604967 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
TUBE1-210ENST00000604967 COL16A1Q07092 1604 aaPredicted RBP15.78■□□□□ 0.12
TUBE1-210ENST00000604967 MYOM2P54296 1465 aa15.78■□□□□ 0.12
TUBE1-210ENST00000604967 DCCP43146 1447 aa15.77■□□□□ 0.12
TUBE1-210ENST00000604967 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
TUBE1-210ENST00000604967 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
TUBE1-210ENST00000604967 CADPS2Q86UW7 1296 aa15.77■□□□□ 0.12
TUBE1-210ENST00000604967 TECPR2O15040 1411 aa15.77■□□□□ 0.11
TUBE1-210ENST00000604967 ATF3P18847 181 aa15.76■□□□□ 0.11
TUBE1-210ENST00000604967 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
TUBE1-210ENST00000604967 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
TUBE1-210ENST00000604967 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
TUBE1-210ENST00000604967 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
TUBE1-210ENST00000604967 C14orf93Q9H972 538 aaKnown RBP15.75■□□□□ 0.11
TUBE1-210ENST00000604967 STK26Q9P289 416 aa15.75■□□□□ 0.11
TUBE1-210ENST00000604967 RGS17Q9UGC6 210 aaPredicted RBP15.74■□□□□ 0.11
TUBE1-210ENST00000604967 AHDC1Q5TGY3 1603 aaPredicted RBP15.74■□□□□ 0.11
TUBE1-210ENST00000604967 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
TUBE1-210ENST00000604967 ADGRB1O14514 1584 aa15.73■□□□□ 0.11
TUBE1-210ENST00000604967 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
TUBE1-210ENST00000604967 C1orf167Q5SNV9 1468 aa15.72■□□□□ 0.11
TUBE1-210ENST00000604967 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
TUBE1-210ENST00000604967 LRP6O75581 1613 aa15.7■□□□□ 0.1
TUBE1-210ENST00000604967 ORAI2Q96SN7 254 aa15.7■□□□□ 0.1
TUBE1-210ENST00000604967 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
TUBE1-210ENST00000604967 NHSL1Q5SYE7 1610 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms