RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 ARHGEF40Q8TER5 1519 aa7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 CC2D1BQ5T0F9 858 aaKnown RBP7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 MYH16Q9H6N6 1097 aa7.59□□□□□ -1.19
COL4A3BP-207ENST00000604926 TRAIPQ9BWF2 469 aa7.59□□□□□ -1.2
COL4A3BP-207ENST00000604926 RPS6KL1Q9Y6S9 549 aa7.58□□□□□ -1.2
COL4A3BP-207ENST00000604926 KIAA0556O60303 1618 aa7.58□□□□□ -1.2
COL4A3BP-207ENST00000604926 ANP32BQ92688 251 aaKnown RBP7.58□□□□□ -1.2
COL4A3BP-207ENST00000604926 FGD5Q6ZNL6 1462 aa7.58□□□□□ -1.2
COL4A3BP-207ENST00000604926 TESPA1A2RU30 521 aaPredicted RBP7.57□□□□□ -1.2
COL4A3BP-207ENST00000604926 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
COL4A3BP-207ENST00000604926 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
COL4A3BP-207ENST00000604926 CCER2I3L3R5 266 aa7.57□□□□□ -1.2
COL4A3BP-207ENST00000604926 MYBPC2Q14324 1141 aa7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 NGEFQ8N5V2 710 aa7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 ADGRL1O94910 1474 aa7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 HSP90AA1P07900 732 aaKnown RBP7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 PTPRTO14522 1441 aa7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
COL4A3BP-207ENST00000604926 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
COL4A3BP-207ENST00000604926 IRF5Q13568 498 aa7.55□□□□□ -1.2
COL4A3BP-207ENST00000604926 CASC1Q6TDU7 716 aa7.55□□□□□ -1.2
COL4A3BP-207ENST00000604926 MKRN3Q13064 507 aaKnown RBP7.55□□□□□ -1.2
COL4A3BP-207ENST00000604926 LMOD2Q6P5Q4 547 aa7.55□□□□□ -1.2
COL4A3BP-207ENST00000604926 RIOK3O14730 519 aaKnown RBP7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 PEX14O75381 377 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 RALBP1Q15311 655 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 WDR7Q9Y4E6 1490 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 UNCXA6NJT0 531 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 MAGI2Q86UL8 1455 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 ANKRD13AQ8IZ07 590 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 CEP120Q8N960 986 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 SIRT1Q96EB6 747 aa7.54□□□□□ -1.2
COL4A3BP-207ENST00000604926 FOSBP53539 338 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 GORABQ5T7V8 394 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 SSFA2P28290 1259 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 P3H3Q8IVL6 736 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 SPATA32Q96LK8 384 aa7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 CENPJQ9HC77 1338 aaPredicted RBP7.53□□□□□ -1.2
COL4A3BP-207ENST00000604926 OTUD6BQ8N6M0 293 aa7.52□□□□□ -1.21
COL4A3BP-207ENST00000604926 TRIM44Q96DX7 344 aaPredicted RBP7.52□□□□□ -1.21
COL4A3BP-207ENST00000604926 IQGAP2Q13576 1575 aa7.52□□□□□ -1.21
COL4A3BP-207ENST00000604926 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
COL4A3BP-207ENST00000604926 RGL2O15211 777 aa7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 ZNF513Q8N8E2 541 aaPredicted RBP7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 DHX16O60231 1041 aaKnown RBP7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 PPFIA4O75335 1185 aa7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 ZNF662Q6ZS27 426 aa7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 ATL2Q8NHH9 583 aa7.51□□□□□ -1.21
COL4A3BP-207ENST00000604926 ZBTB12Q9Y330 459 aaPredicted RBP7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 SYNMO15061 1565 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 ZNF500O60304 480 aaPredicted RBP7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 CCER1Q8TC90 406 aaPredicted RBP7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 CAMSAP2Q08AD1 1489 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 KDM5CP41229 1560 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 RHBDL3P58872 404 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 NBPF9Q3BBW0 867 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 AGLP35573 1532 aa7.5□□□□□ -1.21
COL4A3BP-207ENST00000604926 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL4A3BP-207ENST00000604926 NEO1Q92859 1461 aa7.49□□□□□ -1.21
COL4A3BP-207ENST00000604926 HSP90AB3PQ58FF7 597 aa7.49□□□□□ -1.21
COL4A3BP-207ENST00000604926 GET4Q7L5D6 327 aaPredicted RBP7.49□□□□□ -1.21
COL4A3BP-207ENST00000604926 SDR16C5Q8N3Y7 309 aa7.49□□□□□ -1.21
COL4A3BP-207ENST00000604926 ANKRD62A6NC57 917 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 PRR29P0C7W0 189 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 GOLGA6CA6NDK9 693 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 GOLGA6BA6NDN3 693 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 KIF4AO95239 1232 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 GOLGA6DP0CG33 693 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 FAM43AQ8N2R8 423 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 TSPAN18Q96SJ8 248 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 GOLGA6AQ9NYA3 693 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 ARHGEF12Q9NZN5 1544 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 ZC3H13Q5T200 1668 aaKnown RBP7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 SCP2P22307 547 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 KRBA2Q6ZNG9 492 aa7.48□□□□□ -1.21
COL4A3BP-207ENST00000604926 LTBP4Q8N2S1 1624 aa7.47□□□□□ -1.21
COL4A3BP-207ENST00000604926 MAP4K4O95819 1239 aaPredicted RBP7.47□□□□□ -1.21
COL4A3BP-207ENST00000604926 STRCQ7RTU9 1775 aa7.47□□□□□ -1.21
COL4A3BP-207ENST00000604926 ERBB3P21860 1342 aa7.47□□□□□ -1.21
COL4A3BP-207ENST00000604926 KIF14Q15058 1648 aa7.47□□□□□ -1.21
COL4A3BP-207ENST00000604926 RAB11FIP3O75154 756 aa7.46□□□□□ -1.21
COL4A3BP-207ENST00000604926 CREBRFQ8IUR6 639 aa7.46□□□□□ -1.21
COL4A3BP-207ENST00000604926 PAX3P23760 479 aa7.46□□□□□ -1.22
COL4A3BP-207ENST00000604926 ZNF280DQ6N043 979 aa7.46□□□□□ -1.22
COL4A3BP-207ENST00000604926 DNTTIP2Q5QJE6 756 aaKnown RBP7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 ZHX1Q9UKY1 873 aaPredicted RBP7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 ZC3H4Q9UPT8 1303 aaKnown RBP7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 EPB41L2O43491 1005 aaKnown RBP7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 CCDC181Q5TID7 509 aa7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 CHMP4CQ96CF2 233 aa7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 STK26Q9P289 416 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms