RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 KCNA6P17658 529 aa11.35□□□□□ -0.59
RPS28P1-201ENST00000604589 TRPM2O94759 1503 aa11.35□□□□□ -0.59
RPS28P1-201ENST00000604589 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
RPS28P1-201ENST00000604589 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
RPS28P1-201ENST00000604589 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
RPS28P1-201ENST00000604589 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
RPS28P1-201ENST00000604589 TBX22Q9Y458 520 aa11.33□□□□□ -0.6
RPS28P1-201ENST00000604589 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
RPS28P1-201ENST00000604589 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
RPS28P1-201ENST00000604589 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
RPS28P1-201ENST00000604589 SLC26A8Q96RN1 970 aa11.31□□□□□ -0.6
RPS28P1-201ENST00000604589 NCOA3Q9Y6Q9 1424 aa11.31□□□□□ -0.6
RPS28P1-201ENST00000604589 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
RPS28P1-201ENST00000604589 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
RPS28P1-201ENST00000604589 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
RPS28P1-201ENST00000604589 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
RPS28P1-201ENST00000604589 BCANQ96GW7 911 aa11.29□□□□□ -0.6
RPS28P1-201ENST00000604589 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
RPS28P1-201ENST00000604589 SETBP1Q9Y6X0 1596 aa11.28□□□□□ -0.6
RPS28P1-201ENST00000604589 PROSER2Q86WR7 435 aaPredicted RBP11.27□□□□□ -0.61
RPS28P1-201ENST00000604589 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
RPS28P1-201ENST00000604589 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
RPS28P1-201ENST00000604589 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
RPS28P1-201ENST00000604589 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
RPS28P1-201ENST00000604589 PIP4K2BP78356 416 aa11.26□□□□□ -0.61
RPS28P1-201ENST00000604589 MSH6P52701 1360 aa11.26□□□□□ -0.61
RPS28P1-201ENST00000604589 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
RPS28P1-201ENST00000604589 HSPA1LP34931 641 aa11.25□□□□□ -0.61
RPS28P1-201ENST00000604589 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
RPS28P1-201ENST00000604589 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
RPS28P1-201ENST00000604589 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
RPS28P1-201ENST00000604589 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
RPS28P1-201ENST00000604589 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
RPS28P1-201ENST00000604589 CCDC144AA2RUR9 1427 aa11.23□□□□□ -0.61
RPS28P1-201ENST00000604589 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
RPS28P1-201ENST00000604589 PRAG1Q86YV5 1406 aa11.22□□□□□ -0.61
RPS28P1-201ENST00000604589 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
RPS28P1-201ENST00000604589 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
RPS28P1-201ENST00000604589 NRXN3Q9Y4C0 1643 aa11.22□□□□□ -0.61
RPS28P1-201ENST00000604589 DCCP43146 1447 aa11.21□□□□□ -0.61
RPS28P1-201ENST00000604589 HRCP23327 699 aa11.21□□□□□ -0.61
RPS28P1-201ENST00000604589 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
RPS28P1-201ENST00000604589 KIF1BO60333 1816 aa11.21□□□□□ -0.62
RPS28P1-201ENST00000604589 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
RPS28P1-201ENST00000604589 C19orf44Q9H6X5 657 aa11.2□□□□□ -0.62
RPS28P1-201ENST00000604589 AMOTL2Q9Y2J4 779 aa11.2□□□□□ -0.62
RPS28P1-201ENST00000604589 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
RPS28P1-201ENST00000604589 PTCH1Q13635 1447 aa11.19□□□□□ -0.62
RPS28P1-201ENST00000604589 SPATA31E1Q6ZUB1 1445 aa11.19□□□□□ -0.62
RPS28P1-201ENST00000604589 PTPRUQ92729 1446 aa11.19□□□□□ -0.62
RPS28P1-201ENST00000604589 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
RPS28P1-201ENST00000604589 METP08581 1390 aa11.18□□□□□ -0.62
RPS28P1-201ENST00000604589 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
RPS28P1-201ENST00000604589 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
RPS28P1-201ENST00000604589 ATF3P18847 181 aa11.16□□□□□ -0.62
RPS28P1-201ENST00000604589 C14orf37Q86TY3 774 aa11.16□□□□□ -0.62
RPS28P1-201ENST00000604589 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
RPS28P1-201ENST00000604589 FOXD1Q16676 465 aa11.15□□□□□ -0.62
RPS28P1-201ENST00000604589 RBM33Q96EV2 1170 aaKnown RBP11.15□□□□□ -0.62
RPS28P1-201ENST00000604589 SENP3Q9H4L4 574 aaPredicted RBP11.15□□□□□ -0.62
RPS28P1-201ENST00000604589 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
RPS28P1-201ENST00000604589 ROBO1Q9Y6N7 1651 aa11.14□□□□□ -0.63
RPS28P1-201ENST00000604589 PPLO60437 1756 aa11.14□□□□□ -0.63
RPS28P1-201ENST00000604589 MYOM2P54296 1465 aa11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 TECPR2O15040 1411 aa11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 PIK3C2GO75747 1445 aa11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
RPS28P1-201ENST00000604589 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
RPS28P1-201ENST00000604589 JCADQ9P266 1359 aa11.11□□□□□ -0.63
RPS28P1-201ENST00000604589 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
RPS28P1-201ENST00000604589 MST1RQ04912 1400 aa11.1□□□□□ -0.63
RPS28P1-201ENST00000604589 LRPPRCP42704 1394 aaKnown RBP11.1□□□□□ -0.63
RPS28P1-201ENST00000604589 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
RPS28P1-201ENST00000604589 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
RPS28P1-201ENST00000604589 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
RPS28P1-201ENST00000604589 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
RPS28P1-201ENST00000604589 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 SIRT1Q96EB6 747 aa11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 PHF23Q9BUL5 403 aaPredicted RBP11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 ASXL1Q8IXJ9 1541 aa11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
RPS28P1-201ENST00000604589 LAMC1P11047 1609 aa11.07□□□□□ -0.64
RPS28P1-201ENST00000604589 SOCS7O14512 581 aa11.07□□□□□ -0.64
RPS28P1-201ENST00000604589 C14orf93Q9H972 538 aaKnown RBP11.07□□□□□ -0.64
RPS28P1-201ENST00000604589 CDC42BPGQ6DT37 1551 aa11.07□□□□□ -0.64
RPS28P1-201ENST00000604589 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
RPS28P1-201ENST00000604589 NALCNQ8IZF0 1738 aa11.06□□□□□ -0.64
RPS28P1-201ENST00000604589 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
RPS28P1-201ENST00000604589 KNDC1Q76NI1 1749 aa11.05□□□□□ -0.64
RPS28P1-201ENST00000604589 YTHDC2Q9H6S0 1430 aaKnown RBP11.05□□□□□ -0.64
RPS28P1-201ENST00000604589 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
RPS28P1-201ENST00000604589 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.64
RPS28P1-201ENST00000604589 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
RPS28P1-201ENST00000604589 LRRC59Q96AG4 307 aaKnown RBP11.02□□□□□ -0.65
RPS28P1-201ENST00000604589 DLC1Q96QB1 1528 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms