RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PPP1R15AO75807 674 aaPredicted RBP27.34■■□□□ 1.97
CCDC12-208ENST00000603885 BCANQ96GW7 911 aa27.34■■□□□ 1.97
CCDC12-208ENST00000603885 SLC26A8Q96RN1 970 aa27.34■■□□□ 1.97
CCDC12-208ENST00000603885 PIP4K2BP78356 416 aa27.33■■□□□ 1.97
CCDC12-208ENST00000603885 SPHKAPQ2M3C7 1700 aa27.32■■□□□ 1.96
CCDC12-208ENST00000603885 PLEKHG1Q9ULL1 1385 aa27.32■■□□□ 1.96
CCDC12-208ENST00000603885 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.31■■□□□ 1.96
CCDC12-208ENST00000603885 KCNA6P17658 529 aa27.29■■□□□ 1.96
CCDC12-208ENST00000603885 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
CCDC12-208ENST00000603885 TRIM52Q96A61 297 aa27.26■■□□□ 1.95
CCDC12-208ENST00000603885 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
CCDC12-208ENST00000603885 XIRP1Q702N8 1843 aaKnown RBP27.23■■□□□ 1.95
CCDC12-208ENST00000603885 NWD1Q149M9 1564 aa27.23■■□□□ 1.95
CCDC12-208ENST00000603885 NKTRP30414 1462 aaKnown RBP27.22■■□□□ 1.95
CCDC12-208ENST00000603885 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
CCDC12-208ENST00000603885 TRPM2O94759 1503 aa27.21■■□□□ 1.95
CCDC12-208ENST00000603885 HSPA1LP34931 641 aa27.21■■□□□ 1.95
CCDC12-208ENST00000603885 TMEM94Q12767 1356 aa27.21■■□□□ 1.95
CCDC12-208ENST00000603885 DISP3Q9P2K9 1392 aa27.21■■□□□ 1.95
CCDC12-208ENST00000603885 PROSER2Q86WR7 435 aaPredicted RBP27.19■■□□□ 1.94
CCDC12-208ENST00000603885 TBX22Q9Y458 520 aa27.19■■□□□ 1.94
CCDC12-208ENST00000603885 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
CCDC12-208ENST00000603885 DIP2AQ14689 1571 aa27.18■■□□□ 1.94
CCDC12-208ENST00000603885 SLC4A1APQ9BWU0 796 aaKnown RBP27.17■■□□□ 1.94
CCDC12-208ENST00000603885 ADAMTS13Q76LX8 1427 aa27.16■■□□□ 1.94
CCDC12-208ENST00000603885 CHD2O14647 1828 aaKnown RBP27.16■■□□□ 1.94
CCDC12-208ENST00000603885 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
CCDC12-208ENST00000603885 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
CCDC12-208ENST00000603885 KIF1BO60333 1816 aa27.11■■□□□ 1.93
CCDC12-208ENST00000603885 PIK3R4Q99570 1358 aa27.11■■□□□ 1.93
CCDC12-208ENST00000603885 MSH6P52701 1360 aa27.08■■□□□ 1.93
CCDC12-208ENST00000603885 SETBP1Q9Y6X0 1596 aa27.07■■□□□ 1.92
CCDC12-208ENST00000603885 NEXMIFQ5QGS0 1516 aa27.06■■□□□ 1.92
CCDC12-208ENST00000603885 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
CCDC12-208ENST00000603885 FAM135BQ49AJ0 1406 aa27.03■■□□□ 1.92
CCDC12-208ENST00000603885 NCOA3Q9Y6Q9 1424 aa27.03■■□□□ 1.92
CCDC12-208ENST00000603885 ACIN1Q9UKV3 1341 aaKnown RBP27.01■■□□□ 1.91
CCDC12-208ENST00000603885 FOXD1Q16676 465 aa27■■□□□ 1.91
CCDC12-208ENST00000603885 AMOTL2Q9Y2J4 779 aa27■■□□□ 1.91
CCDC12-208ENST00000603885 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
CCDC12-208ENST00000603885 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
CCDC12-208ENST00000603885 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
CCDC12-208ENST00000603885 MPHOSPH9Q99550 1183 aa26.99■■□□□ 1.91
CCDC12-208ENST00000603885 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
CCDC12-208ENST00000603885 RPGRIP1LQ68CZ1 1315 aa26.96■■□□□ 1.91
CCDC12-208ENST00000603885 ROBO1Q9Y6N7 1651 aa26.96■■□□□ 1.91
CCDC12-208ENST00000603885 VGFO15240 615 aaPredicted RBP26.96■■□□□ 1.91
CCDC12-208ENST00000603885 XRN1Q8IZH2 1706 aaKnown RBP26.96■■□□□ 1.91
CCDC12-208ENST00000603885 ILDR2Q71H61 639 aa26.95■■□□□ 1.9
CCDC12-208ENST00000603885 CCDC144AA2RUR9 1427 aa26.95■■□□□ 1.9
CCDC12-208ENST00000603885 SLAIN2Q9P270 581 aa26.94■■□□□ 1.9
CCDC12-208ENST00000603885 METP08581 1390 aa26.94■■□□□ 1.9
CCDC12-208ENST00000603885 C19orf44Q9H6X5 657 aa26.92■■□□□ 1.9
CCDC12-208ENST00000603885 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
CCDC12-208ENST00000603885 PPLO60437 1756 aa26.9■■□□□ 1.9
CCDC12-208ENST00000603885 CADPS2Q86UW7 1296 aa26.9■■□□□ 1.9
CCDC12-208ENST00000603885 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.9
CCDC12-208ENST00000603885 ATF3P18847 181 aa26.89■■□□□ 1.9
CCDC12-208ENST00000603885 DCCP43146 1447 aa26.84■■□□□ 1.89
CCDC12-208ENST00000603885 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
CCDC12-208ENST00000603885 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
CCDC12-208ENST00000603885 RGL3Q3MIN7 710 aa26.82■■□□□ 1.88
CCDC12-208ENST00000603885 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
CCDC12-208ENST00000603885 PHLPP1O60346 1717 aa26.81■■□□□ 1.88
CCDC12-208ENST00000603885 ANKRD30BQ9BXX2 1392 aa26.8■■□□□ 1.88
CCDC12-208ENST00000603885 PTCH1Q13635 1447 aa26.79■■□□□ 1.88
CCDC12-208ENST00000603885 ADGRL3Q9HAR2 1447 aa26.78■■□□□ 1.88
CCDC12-208ENST00000603885 IFT172Q9UG01 1749 aa26.77■■□□□ 1.88
CCDC12-208ENST00000603885 ADGRF5Q8IZF2 1346 aa26.76■■□□□ 1.87
CCDC12-208ENST00000603885 PRAG1Q86YV5 1406 aa26.75■■□□□ 1.87
CCDC12-208ENST00000603885 SOCS7O14512 581 aa26.75■■□□□ 1.87
CCDC12-208ENST00000603885 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
CCDC12-208ENST00000603885 MST1RQ04912 1400 aa26.73■■□□□ 1.87
CCDC12-208ENST00000603885 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
CCDC12-208ENST00000603885 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
CCDC12-208ENST00000603885 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
CCDC12-208ENST00000603885 JCADQ9P266 1359 aa26.71■■□□□ 1.87
CCDC12-208ENST00000603885 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
CCDC12-208ENST00000603885 HRCP23327 699 aa26.7■■□□□ 1.86
CCDC12-208ENST00000603885 PIK3C2GO75747 1445 aa26.69■■□□□ 1.86
CCDC12-208ENST00000603885 ASXL1Q8IXJ9 1541 aa26.68■■□□□ 1.86
CCDC12-208ENST00000603885 MYOM2P54296 1465 aa26.63■■□□□ 1.85
CCDC12-208ENST00000603885 LRPPRCP42704 1394 aaKnown RBP26.62■■□□□ 1.85
CCDC12-208ENST00000603885 TECPR2O15040 1411 aa26.62■■□□□ 1.85
CCDC12-208ENST00000603885 STK26Q9P289 416 aa26.61■■□□□ 1.85
CCDC12-208ENST00000603885 C1orf167Q5SNV9 1468 aa26.61■■□□□ 1.85
CCDC12-208ENST00000603885 NRXN1Q9ULB1 1477 aa26.61■■□□□ 1.85
CCDC12-208ENST00000603885 NHSL1Q5SYE7 1610 aa26.61■■□□□ 1.85
CCDC12-208ENST00000603885 TMEM132EQ6IEE7 984 aa26.59■■□□□ 1.85
CCDC12-208ENST00000603885 RGS17Q9UGC6 210 aaPredicted RBP26.59■■□□□ 1.85
CCDC12-208ENST00000603885 SHPRHQ149N8 1683 aa26.59■■□□□ 1.85
CCDC12-208ENST00000603885 SPATA31A6Q5VVP1 1343 aa26.59■■□□□ 1.85
CCDC12-208ENST00000603885 KNDC1Q76NI1 1749 aa26.59■■□□□ 1.85
CCDC12-208ENST00000603885 ABCC11Q96J66 1382 aa26.58■■□□□ 1.85
CCDC12-208ENST00000603885 LAMC1P11047 1609 aa26.57■■□□□ 1.84
CCDC12-208ENST00000603885 C14orf93Q9H972 538 aaKnown RBP26.57■■□□□ 1.84
CCDC12-208ENST00000603885 YTHDC2Q9H6S0 1430 aaKnown RBP26.56■■□□□ 1.84
CCDC12-208ENST00000603885 CDC42BPGQ6DT37 1551 aa26.56■■□□□ 1.84
CCDC12-208ENST00000603885 WAPLQ7Z5K2 1190 aa26.54■■□□□ 1.84
CCDC12-208ENST00000603885 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms