RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
TUBE1-204ENST00000603621 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
TUBE1-204ENST00000603621 CPS1P31327 1500 aa21.49■■□□□ 1.03
TUBE1-204ENST00000603621 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
TUBE1-204ENST00000603621 FOXD1Q16676 465 aa21.48■■□□□ 1.03
TUBE1-204ENST00000603621 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
TUBE1-204ENST00000603621 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
TUBE1-204ENST00000603621 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
TUBE1-204ENST00000603621 KIF1BO60333 1816 aa21.47■■□□□ 1.03
TUBE1-204ENST00000603621 TRPM2O94759 1503 aa21.46■■□□□ 1.03
TUBE1-204ENST00000603621 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.45■■□□□ 1.02
TUBE1-204ENST00000603621 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
TUBE1-204ENST00000603621 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
TUBE1-204ENST00000603621 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
TUBE1-204ENST00000603621 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
TUBE1-204ENST00000603621 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
TUBE1-204ENST00000603621 ACIN1Q9UKV3 1341 aaKnown RBP21.37■■□□□ 1.01
TUBE1-204ENST00000603621 KCNA6P17658 529 aa21.36■■□□□ 1.01
TUBE1-204ENST00000603621 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
TUBE1-204ENST00000603621 CHD2O14647 1828 aaKnown RBP21.34■■□□□ 1.01
TUBE1-204ENST00000603621 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
TUBE1-204ENST00000603621 TOM1O60784 492 aa21.33■■□□□ 1.01
TUBE1-204ENST00000603621 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
TUBE1-204ENST00000603621 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
TUBE1-204ENST00000603621 TBX22Q9Y458 520 aa21.33■■□□□ 1.01
TUBE1-204ENST00000603621 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
TUBE1-204ENST00000603621 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
TUBE1-204ENST00000603621 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
TUBE1-204ENST00000603621 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
TUBE1-204ENST00000603621 NWD1Q149M9 1564 aa21.29■■□□□ 1
TUBE1-204ENST00000603621 RGL3Q3MIN7 710 aa21.29■■□□□ 1
TUBE1-204ENST00000603621 DIP2AQ14689 1571 aa21.28■■□□□ 1
TUBE1-204ENST00000603621 TMEM94Q12767 1356 aa21.28■■□□□ 1
TUBE1-204ENST00000603621 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
TUBE1-204ENST00000603621 PPLO60437 1756 aa21.26■□□□□ 0.99
TUBE1-204ENST00000603621 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
TUBE1-204ENST00000603621 SETBP1Q9Y6X0 1596 aa21.25■□□□□ 0.99
TUBE1-204ENST00000603621 NKTRP30414 1462 aaKnown RBP21.25■□□□□ 0.99
TUBE1-204ENST00000603621 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
TUBE1-204ENST00000603621 HRCP23327 699 aa21.24■□□□□ 0.99
TUBE1-204ENST00000603621 ALKQ9UM73 1620 aa21.23■□□□□ 0.99
TUBE1-204ENST00000603621 AMOTL2Q9Y2J4 779 aa21.23■□□□□ 0.99
TUBE1-204ENST00000603621 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
TUBE1-204ENST00000603621 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
TUBE1-204ENST00000603621 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
TUBE1-204ENST00000603621 METP08581 1390 aa21.2■□□□□ 0.98
TUBE1-204ENST00000603621 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
TUBE1-204ENST00000603621 IFT172Q9UG01 1749 aa21.18■□□□□ 0.98
TUBE1-204ENST00000603621 MSH6P52701 1360 aa21.17■□□□□ 0.98
TUBE1-204ENST00000603621 ANKRD30BQ9BXX2 1392 aa21.16■□□□□ 0.98
TUBE1-204ENST00000603621 ADGRF5Q8IZF2 1346 aa21.16■□□□□ 0.98
TUBE1-204ENST00000603621 HSPA1LP34931 641 aa21.16■□□□□ 0.98
TUBE1-204ENST00000603621 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
TUBE1-204ENST00000603621 XRN1Q8IZH2 1706 aaKnown RBP21.15■□□□□ 0.98
TUBE1-204ENST00000603621 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
TUBE1-204ENST00000603621 NCOA3Q9Y6Q9 1424 aa21.09■□□□□ 0.97
TUBE1-204ENST00000603621 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
TUBE1-204ENST00000603621 ATF3P18847 181 aa21.07■□□□□ 0.96
TUBE1-204ENST00000603621 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
TUBE1-204ENST00000603621 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
TUBE1-204ENST00000603621 STK26Q9P289 416 aa21.05■□□□□ 0.96
TUBE1-204ENST00000603621 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
TUBE1-204ENST00000603621 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
TUBE1-204ENST00000603621 FAM135BQ49AJ0 1406 aa21.04■□□□□ 0.96
TUBE1-204ENST00000603621 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
TUBE1-204ENST00000603621 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
TUBE1-204ENST00000603621 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
TUBE1-204ENST00000603621 ROBO2Q9HCK4 1378 aa21.02■□□□□ 0.96
TUBE1-204ENST00000603621 DCAF11Q8TEB1 546 aa21.02■□□□□ 0.96
TUBE1-204ENST00000603621 MYOM2P54296 1465 aa21.01■□□□□ 0.95
TUBE1-204ENST00000603621 NALCNQ8IZF0 1738 aa21.01■□□□□ 0.95
TUBE1-204ENST00000603621 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
TUBE1-204ENST00000603621 PTCH1Q13635 1447 aa21■□□□□ 0.95
TUBE1-204ENST00000603621 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
TUBE1-204ENST00000603621 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
TUBE1-204ENST00000603621 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
TUBE1-204ENST00000603621 ADGRL3Q9HAR2 1447 aa20.98■□□□□ 0.95
TUBE1-204ENST00000603621 NRXN1Q9ULB1 1477 aa20.98■□□□□ 0.95
TUBE1-204ENST00000603621 PHLPP1O60346 1717 aa20.96■□□□□ 0.95
TUBE1-204ENST00000603621 LAMC1P11047 1609 aa20.96■□□□□ 0.95
TUBE1-204ENST00000603621 LRPPRCP42704 1394 aaKnown RBP20.96■□□□□ 0.95
TUBE1-204ENST00000603621 DCCP43146 1447 aa20.95■□□□□ 0.95
TUBE1-204ENST00000603621 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
TUBE1-204ENST00000603621 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
TUBE1-204ENST00000603621 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
TUBE1-204ENST00000603621 KNDC1Q76NI1 1749 aa20.94■□□□□ 0.94
TUBE1-204ENST00000603621 MST1RQ04912 1400 aa20.93■□□□□ 0.94
TUBE1-204ENST00000603621 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
TUBE1-204ENST00000603621 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
TUBE1-204ENST00000603621 BRINP3Q76B58 766 aa20.91■□□□□ 0.94
TUBE1-204ENST00000603621 SIN3AQ96ST3 1273 aa20.91■□□□□ 0.94
TUBE1-204ENST00000603621 TECPR2O15040 1411 aa20.9■□□□□ 0.94
TUBE1-204ENST00000603621 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
TUBE1-204ENST00000603621 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
TUBE1-204ENST00000603621 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.94
TUBE1-204ENST00000603621 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
TUBE1-204ENST00000603621 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
TUBE1-204ENST00000603621 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
TUBE1-204ENST00000603621 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
TUBE1-204ENST00000603621 NUTM2FA1L443 756 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms