RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
PPFIA3-213ENST00000602905 MED14O60244 1454 aa23.54■■□□□ 1.36
PPFIA3-213ENST00000602905 RIMS2Q9UQ26 1411 aa23.53■■□□□ 1.36
PPFIA3-213ENST00000602905 LTKP29376 864 aa23.53■■□□□ 1.36
PPFIA3-213ENST00000602905 BCANQ96GW7 911 aa23.5■■□□□ 1.35
PPFIA3-213ENST00000602905 ZFYVE9O95405 1425 aa23.48■■□□□ 1.35
PPFIA3-213ENST00000602905 ANKRD30BQ9BXX2 1392 aa23.43■■□□□ 1.34
PPFIA3-213ENST00000602905 RPGRIP1LQ68CZ1 1315 aa23.43■■□□□ 1.34
PPFIA3-213ENST00000602905 NUTM2DQ5VT03 806 aaPredicted RBP23.43■■□□□ 1.34
PPFIA3-213ENST00000602905 PLEKHG1Q9ULL1 1385 aa23.42■■□□□ 1.34
PPFIA3-213ENST00000602905 ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.34
PPFIA3-213ENST00000602905 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
PPFIA3-213ENST00000602905 PCGF6Q9BYE7 350 aa23.39■■□□□ 1.33
PPFIA3-213ENST00000602905 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
PPFIA3-213ENST00000602905 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
PPFIA3-213ENST00000602905 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
PPFIA3-213ENST00000602905 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
PPFIA3-213ENST00000602905 PPLO60437 1756 aa23.37■■□□□ 1.33
PPFIA3-213ENST00000602905 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
PPFIA3-213ENST00000602905 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.33
PPFIA3-213ENST00000602905 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
PPFIA3-213ENST00000602905 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
PPFIA3-213ENST00000602905 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
PPFIA3-213ENST00000602905 CPS1P31327 1500 aa23.32■■□□□ 1.32
PPFIA3-213ENST00000602905 IFT172Q9UG01 1749 aa23.3■■□□□ 1.32
PPFIA3-213ENST00000602905 DHX57Q6P158 1386 aaKnown RBP23.29■■□□□ 1.32
PPFIA3-213ENST00000602905 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
PPFIA3-213ENST00000602905 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
PPFIA3-213ENST00000602905 KCNA6P17658 529 aa23.27■■□□□ 1.32
PPFIA3-213ENST00000602905 STRCP1A6NGW2 1772 aa23.26■■□□□ 1.31
PPFIA3-213ENST00000602905 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
PPFIA3-213ENST00000602905 NRXN3Q9Y4C0 1643 aa23.25■■□□□ 1.31
PPFIA3-213ENST00000602905 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
PPFIA3-213ENST00000602905 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
PPFIA3-213ENST00000602905 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
PPFIA3-213ENST00000602905 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
PPFIA3-213ENST00000602905 NWD1Q149M9 1564 aa23.2■■□□□ 1.3
PPFIA3-213ENST00000602905 MYOM2P54296 1465 aa23.2■■□□□ 1.3
PPFIA3-213ENST00000602905 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
PPFIA3-213ENST00000602905 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
PPFIA3-213ENST00000602905 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
PPFIA3-213ENST00000602905 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
PPFIA3-213ENST00000602905 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
PPFIA3-213ENST00000602905 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
PPFIA3-213ENST00000602905 LRRC7Q96NW7 1537 aa23.17■■□□□ 1.3
PPFIA3-213ENST00000602905 SIN3AQ96ST3 1273 aa23.16■■□□□ 1.3
PPFIA3-213ENST00000602905 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
PPFIA3-213ENST00000602905 PIK3C2GO75747 1445 aa23.16■■□□□ 1.3
PPFIA3-213ENST00000602905 METP08581 1390 aa23.15■■□□□ 1.3
PPFIA3-213ENST00000602905 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-213ENST00000602905 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
PPFIA3-213ENST00000602905 NRXN1Q9ULB1 1477 aa23.13■■□□□ 1.29
PPFIA3-213ENST00000602905 LAMC1P11047 1609 aa23.13■■□□□ 1.29
PPFIA3-213ENST00000602905 PTPRUQ92729 1446 aa23.11■■□□□ 1.29
PPFIA3-213ENST00000602905 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
PPFIA3-213ENST00000602905 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
PPFIA3-213ENST00000602905 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
PPFIA3-213ENST00000602905 UBAP1LF5GYI3 381 aa23.09■■□□□ 1.29
PPFIA3-213ENST00000602905 TOM1O60784 492 aa23.09■■□□□ 1.29
PPFIA3-213ENST00000602905 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
PPFIA3-213ENST00000602905 C14orf93Q9H972 538 aaKnown RBP23.09■■□□□ 1.29
PPFIA3-213ENST00000602905 CFAP70Q5T0N1 1121 aa23.07■■□□□ 1.28
PPFIA3-213ENST00000602905 L3MBTL2Q969R5 705 aa23.06■■□□□ 1.28
PPFIA3-213ENST00000602905 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
PPFIA3-213ENST00000602905 MSH6P52701 1360 aa23.05■■□□□ 1.28
PPFIA3-213ENST00000602905 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-213ENST00000602905 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
PPFIA3-213ENST00000602905 TMEM132EQ6IEE7 984 aa23.04■■□□□ 1.28
PPFIA3-213ENST00000602905 STK26Q9P289 416 aa23.03■■□□□ 1.28
PPFIA3-213ENST00000602905 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
PPFIA3-213ENST00000602905 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-213ENST00000602905 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
PPFIA3-213ENST00000602905 PTCH1Q13635 1447 aa23.01■■□□□ 1.27
PPFIA3-213ENST00000602905 YTHDC2Q9H6S0 1430 aaKnown RBP23■■□□□ 1.27
PPFIA3-213ENST00000602905 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
PPFIA3-213ENST00000602905 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
PPFIA3-213ENST00000602905 KIAA1210Q9ULL0 1709 aa22.99■■□□□ 1.27
PPFIA3-213ENST00000602905 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
PPFIA3-213ENST00000602905 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
PPFIA3-213ENST00000602905 ABCC11Q96J66 1382 aa22.99■■□□□ 1.27
PPFIA3-213ENST00000602905 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
PPFIA3-213ENST00000602905 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
PPFIA3-213ENST00000602905 ATF3P18847 181 aa22.97■■□□□ 1.27
PPFIA3-213ENST00000602905 TECPR2O15040 1411 aa22.97■■□□□ 1.27
PPFIA3-213ENST00000602905 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
PPFIA3-213ENST00000602905 ROBO2Q9HCK4 1378 aa22.96■■□□□ 1.27
PPFIA3-213ENST00000602905 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.96■■□□□ 1.27
PPFIA3-213ENST00000602905 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
PPFIA3-213ENST00000602905 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
PPFIA3-213ENST00000602905 SIRT1Q96EB6 747 aa22.93■■□□□ 1.26
PPFIA3-213ENST00000602905 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
PPFIA3-213ENST00000602905 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
PPFIA3-213ENST00000602905 TRAK1Q9UPV9 953 aa22.91■■□□□ 1.26
PPFIA3-213ENST00000602905 DCCP43146 1447 aa22.91■■□□□ 1.26
PPFIA3-213ENST00000602905 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
PPFIA3-213ENST00000602905 WAPLQ7Z5K2 1190 aa22.9■■□□□ 1.26
PPFIA3-213ENST00000602905 POGKQ9P215 609 aa22.9■■□□□ 1.26
PPFIA3-213ENST00000602905 DLC1Q96QB1 1528 aa22.9■■□□□ 1.26
PPFIA3-213ENST00000602905 SLAIN2Q9P270 581 aa22.88■■□□□ 1.25
PPFIA3-213ENST00000602905 TIMELESSQ9UNS1 1208 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms