RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 TRPM2O94759 1503 aa31.61■■■□□ 2.65
PPFIA3-212ENST00000602897 LTBP4Q8N2S1 1624 aa31.61■■■□□ 2.65
PPFIA3-212ENST00000602897 SLIT1O75093 1534 aa31.61■■■□□ 2.65
PPFIA3-212ENST00000602897 ARHGAP23Q9P227 1491 aa31.61■■■□□ 2.65
PPFIA3-212ENST00000602897 TXNDC2Q86VQ3 553 aa31.6■■■□□ 2.65
PPFIA3-212ENST00000602897 TMEM2Q9UHN6 1383 aa31.6■■■□□ 2.65
PPFIA3-212ENST00000602897 SCAF11Q99590 1463 aaKnown RBP31.59■■■□□ 2.65
PPFIA3-212ENST00000602897 LTKP29376 864 aa31.59■■■□□ 2.65
PPFIA3-212ENST00000602897 EID1Q9Y6B2 187 aa31.59■■■□□ 2.65
PPFIA3-212ENST00000602897 SPHKAPQ2M3C7 1700 aa31.58■■■□□ 2.65
PPFIA3-212ENST00000602897 KDM5AP29375 1690 aaKnown RBP31.57■■■□□ 2.64
PPFIA3-212ENST00000602897 ADGRB3O60242 1522 aa31.57■■■□□ 2.64
PPFIA3-212ENST00000602897 NBPF8Q3BBV2 869 aa31.57■■■□□ 2.64
PPFIA3-212ENST00000602897 IQGAP1P46940 1657 aa31.53■■■□□ 2.64
PPFIA3-212ENST00000602897 CHGAP10645 457 aaKnown RBP31.5■■■□□ 2.63
PPFIA3-212ENST00000602897 EIF4G2P78344 907 aaKnown RBP eCLIP31.5■■■□□ 2.63
PPFIA3-212ENST00000602897 STAC3Q96MF2 364 aa31.49■■■□□ 2.63
PPFIA3-212ENST00000602897 DCAF11Q8TEB1 546 aa31.47■■■□□ 2.63
PPFIA3-212ENST00000602897 SPATA31E1Q6ZUB1 1445 aa31.46■■■□□ 2.63
PPFIA3-212ENST00000602897 TMEM131LA2VDJ0 1609 aa31.45■■■□□ 2.62
PPFIA3-212ENST00000602897 RALGAPBQ86X10 1494 aa31.44■■■□□ 2.62
PPFIA3-212ENST00000602897 IQSEC2Q5JU85 1478 aa31.42■■■□□ 2.62
PPFIA3-212ENST00000602897 CLTCL1P53675 1640 aa31.42■■■□□ 2.62
PPFIA3-212ENST00000602897 HSPA5P11021 654 aaKnown RBP31.41■■■□□ 2.62
PPFIA3-212ENST00000602897 HDGFP51858 240 aaKnown RBP31.4■■■□□ 2.62
PPFIA3-212ENST00000602897 RIMS2Q9UQ26 1411 aa31.39■■■□□ 2.62
PPFIA3-212ENST00000602897 ZFYVE9O95405 1425 aa31.39■■■□□ 2.62
PPFIA3-212ENST00000602897 MYO5BQ9ULV0 1848 aa31.39■■■□□ 2.62
PPFIA3-212ENST00000602897 CPS1P31327 1500 aa31.38■■■□□ 2.61
PPFIA3-212ENST00000602897 RGL3Q3MIN7 710 aa31.38■■■□□ 2.61
PPFIA3-212ENST00000602897 KDM2AQ9Y2K7 1162 aa31.38■■■□□ 2.61
PPFIA3-212ENST00000602897 PRAG1Q86YV5 1406 aa31.37■■■□□ 2.61
PPFIA3-212ENST00000602897 BCANQ96GW7 911 aa31.36■■■□□ 2.61
PPFIA3-212ENST00000602897 ZNF326Q5BKZ1 582 aaKnown RBP31.35■■■□□ 2.61
PPFIA3-212ENST00000602897 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.35■■■□□ 2.61
PPFIA3-212ENST00000602897 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
PPFIA3-212ENST00000602897 SENP3Q9H4L4 574 aaPredicted RBP31.34■■■□□ 2.61
PPFIA3-212ENST00000602897 NUTM2DQ5VT03 806 aaPredicted RBP31.31■■■□□ 2.6
PPFIA3-212ENST00000602897 HIRIP3Q9BW71 556 aaPredicted RBP31.31■■■□□ 2.6
PPFIA3-212ENST00000602897 KIF1BO60333 1816 aa31.31■■■□□ 2.6
PPFIA3-212ENST00000602897 PLEKHG1Q9ULL1 1385 aa31.3■■■□□ 2.6
PPFIA3-212ENST00000602897 TRPM1Q7Z4N2 1603 aa31.28■■■□□ 2.6
PPFIA3-212ENST00000602897 UBAP1LF5GYI3 381 aa31.27■■■□□ 2.6
PPFIA3-212ENST00000602897 STRCP1A6NGW2 1772 aa31.26■■■□□ 2.59
PPFIA3-212ENST00000602897 GPRASP1Q5JY77 1395 aa31.25■■■□□ 2.59
PPFIA3-212ENST00000602897 CARD11Q9BXL7 1154 aa31.24■■■□□ 2.59
PPFIA3-212ENST00000602897 USP47Q96K76 1375 aa31.24■■■□□ 2.59
PPFIA3-212ENST00000602897 LAMC1P11047 1609 aa31.24■■■□□ 2.59
PPFIA3-212ENST00000602897 ROCK2O75116 1388 aaKnown RBP31.22■■■□□ 2.59
PPFIA3-212ENST00000602897 LRRC7Q96NW7 1537 aa31.22■■■□□ 2.59
PPFIA3-212ENST00000602897 MIER1Q8N108 512 aa31.21■■■□□ 2.59
PPFIA3-212ENST00000602897 KCNA6P17658 529 aa31.2■■■□□ 2.59
PPFIA3-212ENST00000602897 DDX10Q13206 875 aaKnown RBP31.2■■■□□ 2.59
PPFIA3-212ENST00000602897 MYOM2P54296 1465 aa31.19■■■□□ 2.58
PPFIA3-212ENST00000602897 RPGRIP1LQ68CZ1 1315 aa31.18■■■□□ 2.58
PPFIA3-212ENST00000602897 TBX22Q9Y458 520 aa31.18■■■□□ 2.58
PPFIA3-212ENST00000602897 ADAMTS13Q76LX8 1427 aa31.14■■■□□ 2.58
PPFIA3-212ENST00000602897 TOM1O60784 492 aa31.14■■■□□ 2.58
PPFIA3-212ENST00000602897 WASHC2AQ641Q2 1341 aa31.14■■■□□ 2.57
PPFIA3-212ENST00000602897 IFT172Q9UG01 1749 aa31.13■■■□□ 2.57
PPFIA3-212ENST00000602897 KIAA1210Q9ULL0 1709 aa31.12■■■□□ 2.57
PPFIA3-212ENST00000602897 CCDC7Q96M83 1385 aa31.12■■■□□ 2.57
PPFIA3-212ENST00000602897 NEXMIFQ5QGS0 1516 aa31.11■■■□□ 2.57
PPFIA3-212ENST00000602897 PROSER2Q86WR7 435 aaPredicted RBP31.1■■■□□ 2.57
PPFIA3-212ENST00000602897 DIP2AQ14689 1571 aa31.09■■■□□ 2.57
PPFIA3-212ENST00000602897 SCAF1Q9H7N4 1312 aaKnown RBP31.08■■■□□ 2.57
PPFIA3-212ENST00000602897 PIP4K2BP78356 416 aa31.08■■■□□ 2.57
PPFIA3-212ENST00000602897 NWD1Q149M9 1564 aa31.08■■■□□ 2.57
PPFIA3-212ENST00000602897 NBPF1Q3BBV0 1214 aa31.08■■■□□ 2.57
PPFIA3-212ENST00000602897 NRXN1Q9ULB1 1477 aa31.08■■■□□ 2.57
PPFIA3-212ENST00000602897 TMEM94Q12767 1356 aa31.07■■■□□ 2.56
PPFIA3-212ENST00000602897 NKTRP30414 1462 aaKnown RBP31.07■■■□□ 2.56
PPFIA3-212ENST00000602897 VGFO15240 615 aaPredicted RBP31.05■■■□□ 2.56
PPFIA3-212ENST00000602897 RBM33Q96EV2 1170 aaKnown RBP31.05■■■□□ 2.56
PPFIA3-212ENST00000602897 PIK3R4Q99570 1358 aa31.04■■■□□ 2.56
PPFIA3-212ENST00000602897 SETBP1Q9Y6X0 1596 aa31.04■■■□□ 2.56
PPFIA3-212ENST00000602897 C11orf95C9JLR9 678 aaPredicted RBP31.03■■■□□ 2.56
PPFIA3-212ENST00000602897 PPLO60437 1756 aa31.03■■■□□ 2.56
PPFIA3-212ENST00000602897 CHD2O14647 1828 aaKnown RBP31.03■■■□□ 2.56
PPFIA3-212ENST00000602897 KIF7Q2M1P5 1343 aa31.02■■■□□ 2.56
PPFIA3-212ENST00000602897 ST20-MTHFSA0A0A6YYL1 179 aa31.02■■■□□ 2.56
PPFIA3-212ENST00000602897 NRXN3Q9Y4C0 1643 aa31.01■■■□□ 2.55
PPFIA3-212ENST00000602897 XIRP1Q702N8 1843 aaKnown RBP30.99■■■□□ 2.55
PPFIA3-212ENST00000602897 ALKQ9UM73 1620 aa30.98■■■□□ 2.55
PPFIA3-212ENST00000602897 AMOTL2Q9Y2J4 779 aa30.98■■■□□ 2.55
PPFIA3-212ENST00000602897 ADGRF5Q8IZF2 1346 aa30.97■■■□□ 2.55
PPFIA3-212ENST00000602897 METP08581 1390 aa30.96■■■□□ 2.55
PPFIA3-212ENST00000602897 PTPRUQ92729 1446 aa30.95■■■□□ 2.55
PPFIA3-212ENST00000602897 ANP32CO43423 234 aa30.94■■■□□ 2.54
PPFIA3-212ENST00000602897 PIK3C2GO75747 1445 aa30.92■■■□□ 2.54
PPFIA3-212ENST00000602897 MSH6P52701 1360 aa30.91■■■□□ 2.54
PPFIA3-212ENST00000602897 C14orf37Q86TY3 774 aa30.9■■■□□ 2.54
PPFIA3-212ENST00000602897 SLC24A1O60721 1099 aa30.89■■■□□ 2.54
PPFIA3-212ENST00000602897 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
PPFIA3-212ENST00000602897 HSPA1LP34931 641 aa30.88■■■□□ 2.53
PPFIA3-212ENST00000602897 C14orf93Q9H972 538 aaKnown RBP30.88■■■□□ 2.53
PPFIA3-212ENST00000602897 NCOA3Q9Y6Q9 1424 aa30.87■■■□□ 2.53
PPFIA3-212ENST00000602897 CFAP70Q5T0N1 1121 aa30.87■■■□□ 2.53
PPFIA3-212ENST00000602897 TESK2Q96S53 571 aa30.85■■■□□ 2.53
PPFIA3-212ENST00000602897 XRN1Q8IZH2 1706 aaKnown RBP30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms