RNA–Protein interactions for RNA: ENST00000602878.5

LINC00472-206, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-206ENST00000602878 SLC26A8Q96RN1 970 aa17.54■□□□□ 0.4
LINC00472-206ENST00000602878 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
LINC00472-206ENST00000602878 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
LINC00472-206ENST00000602878 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
LINC00472-206ENST00000602878 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
LINC00472-206ENST00000602878 TOM1O60784 492 aa17.5■□□□□ 0.39
LINC00472-206ENST00000602878 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00472-206ENST00000602878 PLEKHG1Q9ULL1 1385 aa17.5■□□□□ 0.39
LINC00472-206ENST00000602878 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
LINC00472-206ENST00000602878 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
LINC00472-206ENST00000602878 KCNA6P17658 529 aa17.48■□□□□ 0.39
LINC00472-206ENST00000602878 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
LINC00472-206ENST00000602878 XIRP1Q702N8 1843 aaKnown RBP17.48■□□□□ 0.39
LINC00472-206ENST00000602878 TRPM2O94759 1503 aa17.47■□□□□ 0.39
LINC00472-206ENST00000602878 KIF1BO60333 1816 aa17.47■□□□□ 0.39
LINC00472-206ENST00000602878 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
LINC00472-206ENST00000602878 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
LINC00472-206ENST00000602878 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
LINC00472-206ENST00000602878 TBX22Q9Y458 520 aa17.43■□□□□ 0.38
LINC00472-206ENST00000602878 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
LINC00472-206ENST00000602878 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
LINC00472-206ENST00000602878 FOXD1Q16676 465 aa17.42■□□□□ 0.38
LINC00472-206ENST00000602878 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
LINC00472-206ENST00000602878 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
LINC00472-206ENST00000602878 ADAMTS13Q76LX8 1427 aa17.41■□□□□ 0.38
LINC00472-206ENST00000602878 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
LINC00472-206ENST00000602878 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
LINC00472-206ENST00000602878 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
LINC00472-206ENST00000602878 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
LINC00472-206ENST00000602878 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
LINC00472-206ENST00000602878 HSPA1LP34931 641 aa17.38■□□□□ 0.37
LINC00472-206ENST00000602878 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
LINC00472-206ENST00000602878 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
LINC00472-206ENST00000602878 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
LINC00472-206ENST00000602878 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
LINC00472-206ENST00000602878 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
LINC00472-206ENST00000602878 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
LINC00472-206ENST00000602878 AMOTL2Q9Y2J4 779 aa17.33■□□□□ 0.36
LINC00472-206ENST00000602878 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
LINC00472-206ENST00000602878 MSH6P52701 1360 aa17.32■□□□□ 0.36
LINC00472-206ENST00000602878 PTPRUQ92729 1446 aa17.31■□□□□ 0.36
LINC00472-206ENST00000602878 DISP3Q9P2K9 1392 aa17.31■□□□□ 0.36
LINC00472-206ENST00000602878 PPLO60437 1756 aa17.31■□□□□ 0.36
LINC00472-206ENST00000602878 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
LINC00472-206ENST00000602878 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
LINC00472-206ENST00000602878 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
LINC00472-206ENST00000602878 METP08581 1390 aa17.29■□□□□ 0.36
LINC00472-206ENST00000602878 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
LINC00472-206ENST00000602878 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
LINC00472-206ENST00000602878 NCOA3Q9Y6Q9 1424 aa17.28■□□□□ 0.36
LINC00472-206ENST00000602878 FAM135BQ49AJ0 1406 aa17.27■□□□□ 0.35
LINC00472-206ENST00000602878 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.35
LINC00472-206ENST00000602878 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
LINC00472-206ENST00000602878 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
LINC00472-206ENST00000602878 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
LINC00472-206ENST00000602878 SPATA31E1Q6ZUB1 1445 aa17.25■□□□□ 0.35
LINC00472-206ENST00000602878 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
LINC00472-206ENST00000602878 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
LINC00472-206ENST00000602878 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
LINC00472-206ENST00000602878 HRCP23327 699 aa17.23■□□□□ 0.35
LINC00472-206ENST00000602878 IFT172Q9UG01 1749 aa17.23■□□□□ 0.35
LINC00472-206ENST00000602878 ATF3P18847 181 aa17.22■□□□□ 0.35
LINC00472-206ENST00000602878 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
LINC00472-206ENST00000602878 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
LINC00472-206ENST00000602878 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
LINC00472-206ENST00000602878 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
LINC00472-206ENST00000602878 PHLPP1O60346 1717 aa17.16■□□□□ 0.34
LINC00472-206ENST00000602878 ILDR2Q71H61 639 aa17.16■□□□□ 0.34
LINC00472-206ENST00000602878 DCCP43146 1447 aa17.15■□□□□ 0.34
LINC00472-206ENST00000602878 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
LINC00472-206ENST00000602878 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
LINC00472-206ENST00000602878 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
LINC00472-206ENST00000602878 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
LINC00472-206ENST00000602878 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
LINC00472-206ENST00000602878 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
LINC00472-206ENST00000602878 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
LINC00472-206ENST00000602878 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
LINC00472-206ENST00000602878 STK26Q9P289 416 aa17.11■□□□□ 0.33
LINC00472-206ENST00000602878 MST1RQ04912 1400 aa17.11■□□□□ 0.33
LINC00472-206ENST00000602878 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
LINC00472-206ENST00000602878 MYOM2P54296 1465 aa17.1■□□□□ 0.33
LINC00472-206ENST00000602878 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
LINC00472-206ENST00000602878 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
LINC00472-206ENST00000602878 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
LINC00472-206ENST00000602878 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.32
LINC00472-206ENST00000602878 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
LINC00472-206ENST00000602878 LRPPRCP42704 1394 aaKnown RBP17.08■□□□□ 0.32
LINC00472-206ENST00000602878 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
LINC00472-206ENST00000602878 WAPLQ7Z5K2 1190 aa17.07■□□□□ 0.32
LINC00472-206ENST00000602878 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
LINC00472-206ENST00000602878 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
LINC00472-206ENST00000602878 TECPR2O15040 1411 aa17.06■□□□□ 0.32
LINC00472-206ENST00000602878 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
LINC00472-206ENST00000602878 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
LINC00472-206ENST00000602878 JCADQ9P266 1359 aa17.06■□□□□ 0.32
LINC00472-206ENST00000602878 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
LINC00472-206ENST00000602878 LAMC1P11047 1609 aa17.06■□□□□ 0.32
LINC00472-206ENST00000602878 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
LINC00472-206ENST00000602878 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
LINC00472-206ENST00000602878 DHX57Q6P158 1386 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms