RNA–Protein interactions for RNA: ENST00000602831.5

SFXN2-212, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-212ENST00000602831 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
SFXN2-212ENST00000602831 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
SFXN2-212ENST00000602831 CHGAP10645 457 aaKnown RBP24.46■■□□□ 1.51
SFXN2-212ENST00000602831 HDGFP51858 240 aaKnown RBP24.46■■□□□ 1.51
SFXN2-212ENST00000602831 SLC4A1APQ9BWU0 796 aaKnown RBP24.46■■□□□ 1.51
SFXN2-212ENST00000602831 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.51
SFXN2-212ENST00000602831 SETD5Q9C0A6 1442 aa24.45■■□□□ 1.51
SFXN2-212ENST00000602831 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
SFXN2-212ENST00000602831 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
SFXN2-212ENST00000602831 NWD1Q149M9 1564 aa24.43■■□□□ 1.5
SFXN2-212ENST00000602831 KIF1BO60333 1816 aa24.43■■□□□ 1.5
SFXN2-212ENST00000602831 PPP1R15AO75807 674 aaPredicted RBP24.41■■□□□ 1.5
SFXN2-212ENST00000602831 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
SFXN2-212ENST00000602831 SLC26A8Q96RN1 970 aa24.4■■□□□ 1.5
SFXN2-212ENST00000602831 NEXMIFQ5QGS0 1516 aa24.38■■□□□ 1.49
SFXN2-212ENST00000602831 XIRP1Q702N8 1843 aaKnown RBP24.38■■□□□ 1.49
SFXN2-212ENST00000602831 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
SFXN2-212ENST00000602831 UBAP1LF5GYI3 381 aa24.37■■□□□ 1.49
SFXN2-212ENST00000602831 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
SFXN2-212ENST00000602831 NKTRP30414 1462 aaKnown RBP24.37■■□□□ 1.49
SFXN2-212ENST00000602831 KCNA6P17658 529 aa24.36■■□□□ 1.49
SFXN2-212ENST00000602831 MPHOSPH9Q99550 1183 aa24.36■■□□□ 1.49
SFXN2-212ENST00000602831 CHD2O14647 1828 aaKnown RBP24.35■■□□□ 1.49
SFXN2-212ENST00000602831 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
SFXN2-212ENST00000602831 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
SFXN2-212ENST00000602831 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
SFXN2-212ENST00000602831 BCANQ96GW7 911 aa24.34■■□□□ 1.49
SFXN2-212ENST00000602831 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
SFXN2-212ENST00000602831 TBX22Q9Y458 520 aa24.33■■□□□ 1.49
SFXN2-212ENST00000602831 FOXD1Q16676 465 aa24.31■■□□□ 1.48
SFXN2-212ENST00000602831 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
SFXN2-212ENST00000602831 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
SFXN2-212ENST00000602831 TOM1O60784 492 aa24.3■■□□□ 1.48
SFXN2-212ENST00000602831 CCDC144AA2RUR9 1427 aa24.28■■□□□ 1.48
SFXN2-212ENST00000602831 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
SFXN2-212ENST00000602831 TMEM94Q12767 1356 aa24.27■■□□□ 1.48
SFXN2-212ENST00000602831 PPLO60437 1756 aa24.26■■□□□ 1.47
SFXN2-212ENST00000602831 HRCP23327 699 aa24.25■■□□□ 1.47
SFXN2-212ENST00000602831 RPGRIP1LQ68CZ1 1315 aa24.24■■□□□ 1.47
SFXN2-212ENST00000602831 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
SFXN2-212ENST00000602831 XRN1Q8IZH2 1706 aaKnown RBP24.22■■□□□ 1.47
SFXN2-212ENST00000602831 PROSER2Q86WR7 435 aaPredicted RBP24.22■■□□□ 1.47
SFXN2-212ENST00000602831 IFT172Q9UG01 1749 aa24.21■■□□□ 1.47
SFXN2-212ENST00000602831 PTPRUQ92729 1446 aa24.2■■□□□ 1.46
SFXN2-212ENST00000602831 SETD1AO15047 1707 aaKnown RBP24.2■■□□□ 1.46
SFXN2-212ENST00000602831 VGFO15240 615 aaPredicted RBP24.19■■□□□ 1.46
SFXN2-212ENST00000602831 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
SFXN2-212ENST00000602831 PIP4K2BP78356 416 aa24.18■■□□□ 1.46
SFXN2-212ENST00000602831 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
SFXN2-212ENST00000602831 METP08581 1390 aa24.16■■□□□ 1.46
SFXN2-212ENST00000602831 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
SFXN2-212ENST00000602831 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.45
SFXN2-212ENST00000602831 MSH6P52701 1360 aa24.14■■□□□ 1.45
SFXN2-212ENST00000602831 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
SFXN2-212ENST00000602831 HSPA1LP34931 641 aa24.1■■□□□ 1.45
SFXN2-212ENST00000602831 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
SFXN2-212ENST00000602831 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
SFXN2-212ENST00000602831 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
SFXN2-212ENST00000602831 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
SFXN2-212ENST00000602831 ADGRF5Q8IZF2 1346 aa24.07■■□□□ 1.44
SFXN2-212ENST00000602831 PIK3C2GO75747 1445 aa24.06■■□□□ 1.44
SFXN2-212ENST00000602831 PTCH1Q13635 1447 aa24.06■■□□□ 1.44
SFXN2-212ENST00000602831 MYOM2P54296 1465 aa24.06■■□□□ 1.44
SFXN2-212ENST00000602831 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
SFXN2-212ENST00000602831 NRXN1Q9ULB1 1477 aa24.05■■□□□ 1.44
SFXN2-212ENST00000602831 DCCP43146 1447 aa24.03■■□□□ 1.44
SFXN2-212ENST00000602831 C19orf44Q9H6X5 657 aa24.02■■□□□ 1.44
SFXN2-212ENST00000602831 C14orf37Q86TY3 774 aa24.01■■□□□ 1.43
SFXN2-212ENST00000602831 ASXL1Q8IXJ9 1541 aa24■■□□□ 1.43
SFXN2-212ENST00000602831 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
SFXN2-212ENST00000602831 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
SFXN2-212ENST00000602831 SLAIN2Q9P270 581 aa23.99■■□□□ 1.43
SFXN2-212ENST00000602831 LAMC1P11047 1609 aa23.99■■□□□ 1.43
SFXN2-212ENST00000602831 CADPS2Q86UW7 1296 aa23.98■■□□□ 1.43
SFXN2-212ENST00000602831 KNDC1Q76NI1 1749 aa23.97■■□□□ 1.43
SFXN2-212ENST00000602831 ROBO2Q9HCK4 1378 aa23.97■■□□□ 1.43
SFXN2-212ENST00000602831 TECPR2O15040 1411 aa23.96■■□□□ 1.43
SFXN2-212ENST00000602831 ATF3P18847 181 aa23.95■■□□□ 1.42
SFXN2-212ENST00000602831 MED1Q15648 1581 aaPredicted RBP23.94■■□□□ 1.42
SFXN2-212ENST00000602831 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
SFXN2-212ENST00000602831 MST1RQ04912 1400 aa23.92■■□□□ 1.42
SFXN2-212ENST00000602831 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
SFXN2-212ENST00000602831 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
SFXN2-212ENST00000602831 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
SFXN2-212ENST00000602831 AHDC1Q5TGY3 1603 aaPredicted RBP23.89■■□□□ 1.42
SFXN2-212ENST00000602831 YTHDC2Q9H6S0 1430 aaKnown RBP23.89■■□□□ 1.41
SFXN2-212ENST00000602831 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
SFXN2-212ENST00000602831 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
SFXN2-212ENST00000602831 COL16A1Q07092 1604 aaPredicted RBP23.87■■□□□ 1.41
SFXN2-212ENST00000602831 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
SFXN2-212ENST00000602831 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
SFXN2-212ENST00000602831 CFAP70Q5T0N1 1121 aa23.85■■□□□ 1.41
SFXN2-212ENST00000602831 ADGRB1O14514 1584 aa23.85■■□□□ 1.41
SFXN2-212ENST00000602831 BRINP3Q76B58 766 aa23.83■■□□□ 1.41
SFXN2-212ENST00000602831 DCAF11Q8TEB1 546 aa23.83■■□□□ 1.41
SFXN2-212ENST00000602831 NHSL1Q5SYE7 1610 aa23.83■■□□□ 1.41
SFXN2-212ENST00000602831 STK26Q9P289 416 aa23.82■■□□□ 1.4
SFXN2-212ENST00000602831 DLC1Q96QB1 1528 aa23.81■■□□□ 1.4
SFXN2-212ENST00000602831 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
SFXN2-212ENST00000602831 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms