RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
IRF3-230ENST00000601809 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
IRF3-230ENST00000601809 KIF1BO60333 1816 aa26.21■■□□□ 1.79
IRF3-230ENST00000601809 NWD1Q149M9 1564 aa26.2■■□□□ 1.79
IRF3-230ENST00000601809 CHGAP10645 457 aaKnown RBP26.2■■□□□ 1.78
IRF3-230ENST00000601809 XIRP1Q702N8 1843 aaKnown RBP26.2■■□□□ 1.78
IRF3-230ENST00000601809 ALKQ9UM73 1620 aa26.2■■□□□ 1.78
IRF3-230ENST00000601809 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.78
IRF3-230ENST00000601809 ADAMTS13Q76LX8 1427 aa26.19■■□□□ 1.78
IRF3-230ENST00000601809 NEXMIFQ5QGS0 1516 aa26.19■■□□□ 1.78
IRF3-230ENST00000601809 NRXN3Q9Y4C0 1643 aa26.17■■□□□ 1.78
IRF3-230ENST00000601809 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
IRF3-230ENST00000601809 SLC26A8Q96RN1 970 aa26.17■■□□□ 1.78
IRF3-230ENST00000601809 MPHOSPH9Q99550 1183 aa26.17■■□□□ 1.78
IRF3-230ENST00000601809 CHD2O14647 1828 aaKnown RBP26.16■■□□□ 1.78
IRF3-230ENST00000601809 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
IRF3-230ENST00000601809 HDGFP51858 240 aaKnown RBP26.15■■□□□ 1.78
IRF3-230ENST00000601809 FOXD1Q16676 465 aa26.15■■□□□ 1.78
IRF3-230ENST00000601809 DIP2AQ14689 1571 aa26.15■■□□□ 1.78
IRF3-230ENST00000601809 SETBP1Q9Y6X0 1596 aa26.13■■□□□ 1.77
IRF3-230ENST00000601809 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
IRF3-230ENST00000601809 KCNA6P17658 529 aa26.11■■□□□ 1.77
IRF3-230ENST00000601809 TBX22Q9Y458 520 aa26.11■■□□□ 1.77
IRF3-230ENST00000601809 PPP1R15AO75807 674 aaPredicted RBP26.1■■□□□ 1.77
IRF3-230ENST00000601809 NKTRP30414 1462 aaKnown RBP26.1■■□□□ 1.77
IRF3-230ENST00000601809 HRCP23327 699 aa26.08■■□□□ 1.77
IRF3-230ENST00000601809 UBAP1LF5GYI3 381 aa26.07■■□□□ 1.76
IRF3-230ENST00000601809 PPLO60437 1756 aa26.07■■□□□ 1.76
IRF3-230ENST00000601809 SPATA31E1Q6ZUB1 1445 aa26.06■■□□□ 1.76
IRF3-230ENST00000601809 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
IRF3-230ENST00000601809 PIK3R4Q99570 1358 aa26.05■■□□□ 1.76
IRF3-230ENST00000601809 CCDC144AA2RUR9 1427 aa26.04■■□□□ 1.76
IRF3-230ENST00000601809 SETD1AO15047 1707 aaKnown RBP26.03■■□□□ 1.76
IRF3-230ENST00000601809 ZNF326Q5BKZ1 582 aaKnown RBP26.03■■□□□ 1.76
IRF3-230ENST00000601809 PTPRUQ92729 1446 aa26.03■■□□□ 1.76
IRF3-230ENST00000601809 IFT172Q9UG01 1749 aa26.02■■□□□ 1.76
IRF3-230ENST00000601809 TMEM94Q12767 1356 aa26.02■■□□□ 1.76
IRF3-230ENST00000601809 BCANQ96GW7 911 aa26.01■■□□□ 1.75
IRF3-230ENST00000601809 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
IRF3-230ENST00000601809 RPGRIP1LQ68CZ1 1315 aa26■■□□□ 1.75
IRF3-230ENST00000601809 TOM1O60784 492 aa25.97■■□□□ 1.75
IRF3-230ENST00000601809 METP08581 1390 aa25.95■■□□□ 1.75
IRF3-230ENST00000601809 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.75
IRF3-230ENST00000601809 PROSER2Q86WR7 435 aaPredicted RBP25.94■■□□□ 1.74
IRF3-230ENST00000601809 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
IRF3-230ENST00000601809 VGFO15240 615 aaPredicted RBP25.92■■□□□ 1.74
IRF3-230ENST00000601809 RBM33Q96EV2 1170 aaKnown RBP25.92■■□□□ 1.74
IRF3-230ENST00000601809 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
IRF3-230ENST00000601809 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
IRF3-230ENST00000601809 PIP4K2BP78356 416 aa25.88■■□□□ 1.73
IRF3-230ENST00000601809 ADGRF5Q8IZF2 1346 aa25.87■■□□□ 1.73
IRF3-230ENST00000601809 NRXN1Q9ULB1 1477 aa25.85■■□□□ 1.73
IRF3-230ENST00000601809 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
IRF3-230ENST00000601809 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.84■■□□□ 1.73
IRF3-230ENST00000601809 PIK3C2GO75747 1445 aa25.83■■□□□ 1.73
IRF3-230ENST00000601809 MSH6P52701 1360 aa25.82■■□□□ 1.72
IRF3-230ENST00000601809 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
IRF3-230ENST00000601809 HSPA1LP34931 641 aa25.82■■□□□ 1.72
IRF3-230ENST00000601809 MYOM2P54296 1465 aa25.82■■□□□ 1.72
IRF3-230ENST00000601809 ASXL1Q8IXJ9 1541 aa25.82■■□□□ 1.72
IRF3-230ENST00000601809 SCAF1Q9H7N4 1312 aaKnown RBP25.8■■□□□ 1.72
IRF3-230ENST00000601809 PTCH1Q13635 1447 aa25.8■■□□□ 1.72
IRF3-230ENST00000601809 ROBO1Q9Y6N7 1651 aa25.79■■□□□ 1.72
IRF3-230ENST00000601809 NALCNQ8IZF0 1738 aa25.77■■□□□ 1.72
IRF3-230ENST00000601809 DCCP43146 1447 aa25.75■■□□□ 1.71
IRF3-230ENST00000601809 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
IRF3-230ENST00000601809 C19orf44Q9H6X5 657 aa25.75■■□□□ 1.71
IRF3-230ENST00000601809 TECPR2O15040 1411 aa25.72■■□□□ 1.71
IRF3-230ENST00000601809 ADGRL3Q9HAR2 1447 aa25.72■■□□□ 1.71
IRF3-230ENST00000601809 KNDC1Q76NI1 1749 aa25.72■■□□□ 1.71
IRF3-230ENST00000601809 DHX57Q6P158 1386 aaKnown RBP25.71■■□□□ 1.71
IRF3-230ENST00000601809 LAMC1P11047 1609 aa25.71■■□□□ 1.71
IRF3-230ENST00000601809 SLAIN2Q9P270 581 aa25.71■■□□□ 1.71
IRF3-230ENST00000601809 C14orf93Q9H972 538 aaKnown RBP25.68■■□□□ 1.7
IRF3-230ENST00000601809 LRPPRCP42704 1394 aaKnown RBP25.68■■□□□ 1.7
IRF3-230ENST00000601809 CADPS2Q86UW7 1296 aa25.67■■□□□ 1.7
IRF3-230ENST00000601809 MST1RQ04912 1400 aa25.66■■□□□ 1.7
IRF3-230ENST00000601809 ABCC11Q96J66 1382 aa25.66■■□□□ 1.7
IRF3-230ENST00000601809 ADGRB1O14514 1584 aa25.65■■□□□ 1.7
IRF3-230ENST00000601809 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
IRF3-230ENST00000601809 YTHDC2Q9H6S0 1430 aaKnown RBP25.63■■□□□ 1.69
IRF3-230ENST00000601809 TMEM132EQ6IEE7 984 aa25.63■■□□□ 1.69
IRF3-230ENST00000601809 ATF3P18847 181 aa25.62■■□□□ 1.69
IRF3-230ENST00000601809 CFAP70Q5T0N1 1121 aa25.62■■□□□ 1.69
IRF3-230ENST00000601809 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
IRF3-230ENST00000601809 COL16A1Q07092 1604 aaPredicted RBP25.61■■□□□ 1.69
IRF3-230ENST00000601809 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
IRF3-230ENST00000601809 STAC3Q96MF2 364 aa25.6■■□□□ 1.69
IRF3-230ENST00000601809 MED1Q15648 1581 aaPredicted RBP25.6■■□□□ 1.69
IRF3-230ENST00000601809 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
IRF3-230ENST00000601809 CDC42BPGQ6DT37 1551 aa25.58■■□□□ 1.69
IRF3-230ENST00000601809 DCAF11Q8TEB1 546 aa25.58■■□□□ 1.69
IRF3-230ENST00000601809 BRINP3Q76B58 766 aa25.57■■□□□ 1.68
IRF3-230ENST00000601809 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
IRF3-230ENST00000601809 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
IRF3-230ENST00000601809 DLC1Q96QB1 1528 aa25.55■■□□□ 1.68
IRF3-230ENST00000601809 SIRT1Q96EB6 747 aa25.55■■□□□ 1.68
IRF3-230ENST00000601809 C1orf167Q5SNV9 1468 aa25.54■■□□□ 1.68
IRF3-230ENST00000601809 WAPLQ7Z5K2 1190 aa25.54■■□□□ 1.68
IRF3-230ENST00000601809 STK26Q9P289 416 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms