RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CPS1P31327 1500 aa16.89■□□□□ 0.29
ZNF548-211ENST00000600927 CLTCL1P53675 1640 aa16.88■□□□□ 0.29
ZNF548-211ENST00000600927 TXNDC2Q86VQ3 553 aa16.87■□□□□ 0.29
ZNF548-211ENST00000600927 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
ZNF548-211ENST00000600927 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
ZNF548-211ENST00000600927 RIMS2Q9UQ26 1411 aa16.86■□□□□ 0.29
ZNF548-211ENST00000600927 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
ZNF548-211ENST00000600927 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
ZNF548-211ENST00000600927 TRIM52Q96A61 297 aa16.82■□□□□ 0.28
ZNF548-211ENST00000600927 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
ZNF548-211ENST00000600927 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
ZNF548-211ENST00000600927 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
ZNF548-211ENST00000600927 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
ZNF548-211ENST00000600927 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
ZNF548-211ENST00000600927 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
ZNF548-211ENST00000600927 ADAMTS13Q76LX8 1427 aa16.78■□□□□ 0.28
ZNF548-211ENST00000600927 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
ZNF548-211ENST00000600927 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
ZNF548-211ENST00000600927 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
ZNF548-211ENST00000600927 KIF1BO60333 1816 aa16.77■□□□□ 0.27
ZNF548-211ENST00000600927 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
ZNF548-211ENST00000600927 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
ZNF548-211ENST00000600927 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
ZNF548-211ENST00000600927 HDGFP51858 240 aaKnown RBP16.75■□□□□ 0.27
ZNF548-211ENST00000600927 NKTRP30414 1462 aaKnown RBP16.74■□□□□ 0.27
ZNF548-211ENST00000600927 XIRP1Q702N8 1843 aaKnown RBP16.74■□□□□ 0.27
ZNF548-211ENST00000600927 FOXD1Q16676 465 aa16.73■□□□□ 0.27
ZNF548-211ENST00000600927 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
ZNF548-211ENST00000600927 CHD2O14647 1828 aaKnown RBP16.73■□□□□ 0.27
ZNF548-211ENST00000600927 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
ZNF548-211ENST00000600927 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
ZNF548-211ENST00000600927 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
ZNF548-211ENST00000600927 KCNA6P17658 529 aa16.71■□□□□ 0.27
ZNF548-211ENST00000600927 TBX22Q9Y458 520 aa16.71■□□□□ 0.27
ZNF548-211ENST00000600927 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
ZNF548-211ENST00000600927 PPLO60437 1756 aa16.7■□□□□ 0.26
ZNF548-211ENST00000600927 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
ZNF548-211ENST00000600927 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
ZNF548-211ENST00000600927 IFT172Q9UG01 1749 aa16.68■□□□□ 0.26
ZNF548-211ENST00000600927 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
ZNF548-211ENST00000600927 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
ZNF548-211ENST00000600927 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
ZNF548-211ENST00000600927 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
ZNF548-211ENST00000600927 TMEM94Q12767 1356 aa16.65■□□□□ 0.26
ZNF548-211ENST00000600927 UBAP1LF5GYI3 381 aa16.65■□□□□ 0.26
ZNF548-211ENST00000600927 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.26
ZNF548-211ENST00000600927 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
ZNF548-211ENST00000600927 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
ZNF548-211ENST00000600927 BCANQ96GW7 911 aa16.62■□□□□ 0.25
ZNF548-211ENST00000600927 METP08581 1390 aa16.62■□□□□ 0.25
ZNF548-211ENST00000600927 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
ZNF548-211ENST00000600927 VGFO15240 615 aaPredicted RBP16.6■□□□□ 0.25
ZNF548-211ENST00000600927 TOM1O60784 492 aa16.6■□□□□ 0.25
ZNF548-211ENST00000600927 NRXN1Q9ULB1 1477 aa16.6■□□□□ 0.25
ZNF548-211ENST00000600927 MYOM2P54296 1465 aa16.59■□□□□ 0.25
ZNF548-211ENST00000600927 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.24
ZNF548-211ENST00000600927 PIK3C2GO75747 1445 aa16.58■□□□□ 0.24
ZNF548-211ENST00000600927 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
ZNF548-211ENST00000600927 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
ZNF548-211ENST00000600927 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
ZNF548-211ENST00000600927 AMOTL2Q9Y2J4 779 aa16.56■□□□□ 0.24
ZNF548-211ENST00000600927 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
ZNF548-211ENST00000600927 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
ZNF548-211ENST00000600927 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
ZNF548-211ENST00000600927 MSH6P52701 1360 aa16.53■□□□□ 0.24
ZNF548-211ENST00000600927 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
ZNF548-211ENST00000600927 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.53■□□□□ 0.24
ZNF548-211ENST00000600927 DCCP43146 1447 aa16.53■□□□□ 0.24
ZNF548-211ENST00000600927 TECPR2O15040 1411 aa16.52■□□□□ 0.23
ZNF548-211ENST00000600927 LAMC1P11047 1609 aa16.52■□□□□ 0.23
ZNF548-211ENST00000600927 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
ZNF548-211ENST00000600927 KNDC1Q76NI1 1749 aa16.5■□□□□ 0.23
ZNF548-211ENST00000600927 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
ZNF548-211ENST00000600927 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
ZNF548-211ENST00000600927 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
ZNF548-211ENST00000600927 TONSLQ96HA7 1378 aa16.5■□□□□ 0.23
ZNF548-211ENST00000600927 HSPA1LP34931 641 aa16.49■□□□□ 0.23
ZNF548-211ENST00000600927 ADGRL3Q9HAR2 1447 aa16.49■□□□□ 0.23
ZNF548-211ENST00000600927 ROBO2Q9HCK4 1378 aa16.49■□□□□ 0.23
ZNF548-211ENST00000600927 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
ZNF548-211ENST00000600927 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
ZNF548-211ENST00000600927 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
ZNF548-211ENST00000600927 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
ZNF548-211ENST00000600927 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
ZNF548-211ENST00000600927 C14orf93Q9H972 538 aaKnown RBP16.45■□□□□ 0.22
ZNF548-211ENST00000600927 ABCC11Q96J66 1382 aa16.44■□□□□ 0.22
ZNF548-211ENST00000600927 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
ZNF548-211ENST00000600927 MST1RQ04912 1400 aa16.44■□□□□ 0.22
ZNF548-211ENST00000600927 YTHDC2Q9H6S0 1430 aaKnown RBP16.44■□□□□ 0.22
ZNF548-211ENST00000600927 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
ZNF548-211ENST00000600927 SLAIN2Q9P270 581 aa16.43■□□□□ 0.22
ZNF548-211ENST00000600927 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
ZNF548-211ENST00000600927 AHDC1Q5TGY3 1603 aaPredicted RBP16.41■□□□□ 0.22
ZNF548-211ENST00000600927 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
ZNF548-211ENST00000600927 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
ZNF548-211ENST00000600927 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
ZNF548-211ENST00000600927 COL16A1Q07092 1604 aaPredicted RBP16.4■□□□□ 0.22
ZNF548-211ENST00000600927 ATF3P18847 181 aa16.39■□□□□ 0.21
ZNF548-211ENST00000600927 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
ZNF548-211ENST00000600927 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms