RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 PPP1R15AO75807 674 aaPredicted RBP42.1■■■■■ 4.33
ZNF558-206ENST00000599938 HDGFP51858 240 aaKnown RBP42.08■■■■■ 4.33
ZNF558-206ENST00000599938 SETD5Q9C0A6 1442 aa42.06■■■■■ 4.32
ZNF558-206ENST00000599938 PLEKHG1Q9ULL1 1385 aa42.06■■■■■ 4.32
ZNF558-206ENST00000599938 BCANQ96GW7 911 aa42.05■■■■■ 4.32
ZNF558-206ENST00000599938 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.04■■■■■ 4.32
ZNF558-206ENST00000599938 SLC26A8Q96RN1 970 aa42.03■■■■■ 4.32
ZNF558-206ENST00000599938 SENP3Q9H4L4 574 aaPredicted RBP42.01■■■■■ 4.32
ZNF558-206ENST00000599938 LRRC7Q96NW7 1537 aa42■■■■■ 4.31
ZNF558-206ENST00000599938 UBAP1LF5GYI3 381 aa42■■■■■ 4.31
ZNF558-206ENST00000599938 KIF1BO60333 1816 aa41.99■■■■■ 4.31
ZNF558-206ENST00000599938 NUTM2DQ5VT03 806 aaPredicted RBP41.98■■■■■ 4.31
ZNF558-206ENST00000599938 ZNF326Q5BKZ1 582 aaKnown RBP41.94■■■■■ 4.3
ZNF558-206ENST00000599938 ACIN1Q9UKV3 1341 aaKnown RBP41.94■■■■■ 4.3
ZNF558-206ENST00000599938 RAB3GAP2Q9H2M9 1393 aa41.93■■■■■ 4.3
ZNF558-206ENST00000599938 FOXD1Q16676 465 aa41.91■■■■■ 4.3
ZNF558-206ENST00000599938 MPHOSPH9Q99550 1183 aa41.91■■■■■ 4.3
ZNF558-206ENST00000599938 NWD1Q149M9 1564 aa41.91■■■■■ 4.3
ZNF558-206ENST00000599938 DIP2AQ14689 1571 aa41.89■■■■■ 4.3
ZNF558-206ENST00000599938 KCNA6P17658 529 aa41.87■■■■■ 4.29
ZNF558-206ENST00000599938 NEXMIFQ5QGS0 1516 aa41.86■■■■■ 4.29
ZNF558-206ENST00000599938 ADAMTS13Q76LX8 1427 aa41.86■■■■■ 4.29
ZNF558-206ENST00000599938 NKTRP30414 1462 aaKnown RBP41.85■■■■■ 4.29
ZNF558-206ENST00000599938 TOM1O60784 492 aa41.82■■■■■ 4.29
ZNF558-206ENST00000599938 XIRP1Q702N8 1843 aaKnown RBP41.82■■■■■ 4.29
ZNF558-206ENST00000599938 CCDC144AA2RUR9 1427 aa41.8■■■■■ 4.28
ZNF558-206ENST00000599938 TBX22Q9Y458 520 aa41.8■■■■■ 4.28
ZNF558-206ENST00000599938 CHD2O14647 1828 aaKnown RBP41.8■■■■■ 4.28
ZNF558-206ENST00000599938 SETBP1Q9Y6X0 1596 aa41.79■■■■■ 4.28
ZNF558-206ENST00000599938 NRXN3Q9Y4C0 1643 aa41.78■■■■■ 4.28
ZNF558-206ENST00000599938 ALKQ9UM73 1620 aa41.77■■■■■ 4.28
ZNF558-206ENST00000599938 SCAF1Q9H7N4 1312 aaKnown RBP41.76■■■■■ 4.28
ZNF558-206ENST00000599938 TMEM94Q12767 1356 aa41.76■■■■■ 4.27
ZNF558-206ENST00000599938 PIP4K2BP78356 416 aa41.73■■■■■ 4.27
ZNF558-206ENST00000599938 PIK3R4Q99570 1358 aa41.72■■■■■ 4.27
ZNF558-206ENST00000599938 PROSER2Q86WR7 435 aaPredicted RBP41.71■■■■■ 4.27
ZNF558-206ENST00000599938 PPLO60437 1756 aa41.67■■■■■ 4.26
ZNF558-206ENST00000599938 RBM33Q96EV2 1170 aaKnown RBP41.65■■■■■ 4.26
ZNF558-206ENST00000599938 RPGRIP1LQ68CZ1 1315 aa41.65■■■■■ 4.26
ZNF558-206ENST00000599938 SPATA31E1Q6ZUB1 1445 aa41.61■■■■■ 4.25
ZNF558-206ENST00000599938 VGFO15240 615 aaPredicted RBP41.6■■■■■ 4.25
ZNF558-206ENST00000599938 PTPRUQ92729 1446 aa41.6■■■■■ 4.25
ZNF558-206ENST00000599938 HRCP23327 699 aa41.59■■■■■ 4.25
ZNF558-206ENST00000599938 XRN1Q8IZH2 1706 aaKnown RBP41.57■■■■■ 4.25
ZNF558-206ENST00000599938 METP08581 1390 aa41.55■■■■■ 4.24
ZNF558-206ENST00000599938 MSH6P52701 1360 aa41.54■■■■■ 4.24
ZNF558-206ENST00000599938 RGL3Q3MIN7 710 aa41.54■■■■■ 4.24
ZNF558-206ENST00000599938 AMOTL2Q9Y2J4 779 aa41.54■■■■■ 4.24
ZNF558-206ENST00000599938 IFT172Q9UG01 1749 aa41.53■■■■■ 4.24
ZNF558-206ENST00000599938 SETD1AO15047 1707 aaKnown RBP41.51■■■■■ 4.24
ZNF558-206ENST00000599938 HSPA1LP34931 641 aa41.49■■■■■ 4.23
ZNF558-206ENST00000599938 NCOA3Q9Y6Q9 1424 aa41.49■■■■■ 4.23
ZNF558-206ENST00000599938 ANKRD30BQ9BXX2 1392 aa41.46■■■■■ 4.23
ZNF558-206ENST00000599938 C14orf37Q86TY3 774 aa41.45■■■■■ 4.23
ZNF558-206ENST00000599938 ADGRF5Q8IZF2 1346 aa41.41■■■■■ 4.22
ZNF558-206ENST00000599938 SIPA1L2Q9P2F8 1722 aaPredicted RBP41.37■■■■■ 4.21
ZNF558-206ENST00000599938 ROBO1Q9Y6N7 1651 aa41.36■■■■■ 4.21
ZNF558-206ENST00000599938 FAM135BQ49AJ0 1406 aa41.35■■■■■ 4.21
ZNF558-206ENST00000599938 PIK3C2GO75747 1445 aa41.33■■■■■ 4.21
ZNF558-206ENST00000599938 PTCH1Q13635 1447 aa41.32■■■■■ 4.21
ZNF558-206ENST00000599938 C19orf44Q9H6X5 657 aa41.31■■■■■ 4.2
ZNF558-206ENST00000599938 MYOM2P54296 1465 aa41.3■■■■■ 4.2
ZNF558-206ENST00000599938 PRAG1Q86YV5 1406 aa41.27■■■■■ 4.2
ZNF558-206ENST00000599938 ATF3P18847 181 aa41.27■■■■■ 4.2
ZNF558-206ENST00000599938 SLAIN2Q9P270 581 aa41.27■■■■■ 4.2
ZNF558-206ENST00000599938 CADPS2Q86UW7 1296 aa41.26■■■■■ 4.2
ZNF558-206ENST00000599938 DCCP43146 1447 aa41.26■■■■■ 4.19
ZNF558-206ENST00000599938 NALCNQ8IZF0 1738 aa41.24■■■■■ 4.19
ZNF558-206ENST00000599938 ADGRL3Q9HAR2 1447 aa41.24■■■■■ 4.19
ZNF558-206ENST00000599938 NRXN1Q9ULB1 1477 aa41.23■■■■■ 4.19
ZNF558-206ENST00000599938 ROBO2Q9HCK4 1378 aa41.23■■■■■ 4.19
ZNF558-206ENST00000599938 ASXL1Q8IXJ9 1541 aa41.22■■■■■ 4.19
ZNF558-206ENST00000599938 DISP3Q9P2K9 1392 aa41.19■■■■■ 4.18
ZNF558-206ENST00000599938 LAMC1P11047 1609 aa41.18■■■■■ 4.18
ZNF558-206ENST00000599938 KNDC1Q76NI1 1749 aa41.13■■■■■ 4.17
ZNF558-206ENST00000599938 LRPPRCP42704 1394 aaKnown RBP41.12■■■■■ 4.17
ZNF558-206ENST00000599938 TECPR2O15040 1411 aa41.11■■■■■ 4.17
ZNF558-206ENST00000599938 MED1Q15648 1581 aaPredicted RBP41.11■■■■■ 4.17
ZNF558-206ENST00000599938 TMEM132EQ6IEE7 984 aa41.1■■■■■ 4.17
ZNF558-206ENST00000599938 PHLPP1O60346 1717 aa41.1■■■■■ 4.17
ZNF558-206ENST00000599938 MST1RQ04912 1400 aa41.1■■■■■ 4.17
ZNF558-206ENST00000599938 STK26Q9P289 416 aa41.09■■■■■ 4.17
ZNF558-206ENST00000599938 C14orf93Q9H972 538 aaKnown RBP41.08■■■■■ 4.17
ZNF558-206ENST00000599938 YTHDC2Q9H6S0 1430 aaKnown RBP41.07■■■■■ 4.16
ZNF558-206ENST00000599938 CFAP70Q5T0N1 1121 aa41.05■■■■■ 4.16
ZNF558-206ENST00000599938 DCAF11Q8TEB1 546 aa41.05■■■■■ 4.16
ZNF558-206ENST00000599938 ABCC11Q96J66 1382 aa41.04■■■■■ 4.16
ZNF558-206ENST00000599938 KDM2AQ9Y2K7 1162 aa41.03■■■■■ 4.16
ZNF558-206ENST00000599938 DHX57Q6P158 1386 aaKnown RBP41.01■■■■■ 4.16
ZNF558-206ENST00000599938 AHDC1Q5TGY3 1603 aaPredicted RBP41.01■■■■■ 4.16
ZNF558-206ENST00000599938 TRIM26Q12899 539 aaPredicted RBP41■■■■■ 4.15
ZNF558-206ENST00000599938 BRINP3Q76B58 766 aa40.99■■■■■ 4.15
ZNF558-206ENST00000599938 COL16A1Q07092 1604 aaPredicted RBP40.99■■■■■ 4.15
ZNF558-206ENST00000599938 STAC3Q96MF2 364 aa40.98■■■■■ 4.15
ZNF558-206ENST00000599938 CDC42BPGQ6DT37 1551 aa40.97■■■■■ 4.15
ZNF558-206ENST00000599938 WAPLQ7Z5K2 1190 aa40.94■■■■■ 4.14
ZNF558-206ENST00000599938 PLEKHH1Q9ULM0 1364 aa40.94■■■■■ 4.14
ZNF558-206ENST00000599938 ADGRB1O14514 1584 aa40.93■■■■■ 4.14
ZNF558-206ENST00000599938 C1orf167Q5SNV9 1468 aa40.92■■■■■ 4.14
ZNF558-206ENST00000599938 NHSL1Q5SYE7 1610 aa40.89■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms