RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 HDGFP51858 240 aaKnown RBP26.28■■□□□ 1.8
USHBP1-209ENST00000598570 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.26■■□□□ 1.79
USHBP1-209ENST00000598570 PLEKHG1Q9ULL1 1385 aa26.25■■□□□ 1.79
USHBP1-209ENST00000598570 CPS1P31327 1500 aa26.23■■□□□ 1.79
USHBP1-209ENST00000598570 FBXO41Q8TF61 875 aa26.22■■□□□ 1.79
USHBP1-209ENST00000598570 KIF1BO60333 1816 aa26.21■■□□□ 1.79
USHBP1-209ENST00000598570 FOXD1Q16676 465 aa26.2■■□□□ 1.78
USHBP1-209ENST00000598570 STRCP1A6NGW2 1772 aa26.2■■□□□ 1.78
USHBP1-209ENST00000598570 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
USHBP1-209ENST00000598570 CHGAP10645 457 aaKnown RBP26.17■■□□□ 1.78
USHBP1-209ENST00000598570 RPGRIP1LQ68CZ1 1315 aa26.16■■□□□ 1.78
USHBP1-209ENST00000598570 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
USHBP1-209ENST00000598570 NEXMIFQ5QGS0 1516 aa26.16■■□□□ 1.78
USHBP1-209ENST00000598570 ADAMTS13Q76LX8 1427 aa26.15■■□□□ 1.78
USHBP1-209ENST00000598570 ILDR1Q86SU0 546 aaPredicted RBP26.15■■□□□ 1.78
USHBP1-209ENST00000598570 ANKRD30BQ9BXX2 1392 aa26.13■■□□□ 1.77
USHBP1-209ENST00000598570 CCDC144AA2RUR9 1427 aa26.13■■□□□ 1.77
USHBP1-209ENST00000598570 KCNA6P17658 529 aa26.12■■□□□ 1.77
USHBP1-209ENST00000598570 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
USHBP1-209ENST00000598570 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
USHBP1-209ENST00000598570 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
USHBP1-209ENST00000598570 LRRC7Q96NW7 1537 aa26.1■■□□□ 1.77
USHBP1-209ENST00000598570 SLC26A8Q96RN1 970 aa26.1■■□□□ 1.77
USHBP1-209ENST00000598570 NRXN3Q9Y4C0 1643 aa26.1■■□□□ 1.77
USHBP1-209ENST00000598570 NWD1Q149M9 1564 aa26.09■■□□□ 1.77
USHBP1-209ENST00000598570 CHD2O14647 1828 aaKnown RBP26.09■■□□□ 1.77
USHBP1-209ENST00000598570 PPP1R15AO75807 674 aaPredicted RBP26.08■■□□□ 1.77
USHBP1-209ENST00000598570 PPLO60437 1756 aa26.06■■□□□ 1.76
USHBP1-209ENST00000598570 VGFO15240 615 aaPredicted RBP26.05■■□□□ 1.76
USHBP1-209ENST00000598570 ZNF326Q5BKZ1 582 aaKnown RBP26.05■■□□□ 1.76
USHBP1-209ENST00000598570 NUTM2DQ5VT03 806 aaPredicted RBP26.05■■□□□ 1.76
USHBP1-209ENST00000598570 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
USHBP1-209ENST00000598570 NKTRP30414 1462 aaKnown RBP26.03■■□□□ 1.76
USHBP1-209ENST00000598570 XIRP1Q702N8 1843 aaKnown RBP26.02■■□□□ 1.76
USHBP1-209ENST00000598570 IFT172Q9UG01 1749 aa26.01■■□□□ 1.75
USHBP1-209ENST00000598570 ALKQ9UM73 1620 aa25.98■■□□□ 1.75
USHBP1-209ENST00000598570 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
USHBP1-209ENST00000598570 NCOA3Q9Y6Q9 1424 aa25.97■■□□□ 1.75
USHBP1-209ENST00000598570 BCANQ96GW7 911 aa25.96■■□□□ 1.75
USHBP1-209ENST00000598570 SETD1AO15047 1707 aaKnown RBP25.96■■□□□ 1.75
USHBP1-209ENST00000598570 METP08581 1390 aa25.95■■□□□ 1.74
USHBP1-209ENST00000598570 NRXN1Q9ULB1 1477 aa25.94■■□□□ 1.74
USHBP1-209ENST00000598570 PRAG1Q86YV5 1406 aa25.94■■□□□ 1.74
USHBP1-209ENST00000598570 XRN1Q8IZH2 1706 aaKnown RBP25.92■■□□□ 1.74
USHBP1-209ENST00000598570 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
USHBP1-209ENST00000598570 ADGRF5Q8IZF2 1346 aa25.91■■□□□ 1.74
USHBP1-209ENST00000598570 RGL3Q3MIN7 710 aa25.91■■□□□ 1.74
USHBP1-209ENST00000598570 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
USHBP1-209ENST00000598570 STAC3Q96MF2 364 aa25.9■■□□□ 1.74
USHBP1-209ENST00000598570 MYOM2P54296 1465 aa25.9■■□□□ 1.74
USHBP1-209ENST00000598570 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
USHBP1-209ENST00000598570 PIK3C2GO75747 1445 aa25.88■■□□□ 1.73
USHBP1-209ENST00000598570 UBAP1LF5GYI3 381 aa25.88■■□□□ 1.73
USHBP1-209ENST00000598570 TOM1O60784 492 aa25.88■■□□□ 1.73
USHBP1-209ENST00000598570 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
USHBP1-209ENST00000598570 DHX57Q6P158 1386 aaKnown RBP25.84■■□□□ 1.73
USHBP1-209ENST00000598570 C14orf93Q9H972 538 aaKnown RBP25.82■■□□□ 1.72
USHBP1-209ENST00000598570 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
USHBP1-209ENST00000598570 TECPR2O15040 1411 aa25.78■■□□□ 1.72
USHBP1-209ENST00000598570 C19orf44Q9H6X5 657 aa25.77■■□□□ 1.72
USHBP1-209ENST00000598570 RBM33Q96EV2 1170 aaKnown RBP25.76■■□□□ 1.71
USHBP1-209ENST00000598570 ABCC11Q96J66 1382 aa25.76■■□□□ 1.71
USHBP1-209ENST00000598570 ASXL1Q8IXJ9 1541 aa25.76■■□□□ 1.71
USHBP1-209ENST00000598570 FAM135BQ49AJ0 1406 aa25.75■■□□□ 1.71
USHBP1-209ENST00000598570 LRPPRCP42704 1394 aaKnown RBP25.74■■□□□ 1.71
USHBP1-209ENST00000598570 MSH6P52701 1360 aa25.74■■□□□ 1.71
USHBP1-209ENST00000598570 SIRT1Q96EB6 747 aa25.74■■□□□ 1.71
USHBP1-209ENST00000598570 LAMC1P11047 1609 aa25.74■■□□□ 1.71
USHBP1-209ENST00000598570 DCCP43146 1447 aa25.73■■□□□ 1.71
USHBP1-209ENST00000598570 ROBO2Q9HCK4 1378 aa25.73■■□□□ 1.71
USHBP1-209ENST00000598570 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.72■■□□□ 1.71
USHBP1-209ENST00000598570 DCAF11Q8TEB1 546 aa25.71■■□□□ 1.71
USHBP1-209ENST00000598570 CFAP70Q5T0N1 1121 aa25.69■■□□□ 1.7
USHBP1-209ENST00000598570 SLAIN2Q9P270 581 aa25.69■■□□□ 1.7
USHBP1-209ENST00000598570 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
USHBP1-209ENST00000598570 KNDC1Q76NI1 1749 aa25.68■■□□□ 1.7
USHBP1-209ENST00000598570 ADGRL3Q9HAR2 1447 aa25.68■■□□□ 1.7
USHBP1-209ENST00000598570 CADPS2Q86UW7 1296 aa25.67■■□□□ 1.7
USHBP1-209ENST00000598570 YTHDC2Q9H6S0 1430 aaKnown RBP25.67■■□□□ 1.7
USHBP1-209ENST00000598570 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
USHBP1-209ENST00000598570 TMEM132EQ6IEE7 984 aa25.66■■□□□ 1.7
USHBP1-209ENST00000598570 SIN3AQ96ST3 1273 aa25.63■■□□□ 1.69
USHBP1-209ENST00000598570 HSPA1LP34931 641 aa25.62■■□□□ 1.69
USHBP1-209ENST00000598570 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
USHBP1-209ENST00000598570 NALCNQ8IZF0 1738 aa25.62■■□□□ 1.69
USHBP1-209ENST00000598570 KIAA1210Q9ULL0 1709 aa25.61■■□□□ 1.69
USHBP1-209ENST00000598570 DLC1Q96QB1 1528 aa25.61■■□□□ 1.69
USHBP1-209ENST00000598570 ATF3P18847 181 aa25.6■■□□□ 1.69
USHBP1-209ENST00000598570 L3MBTL2Q969R5 705 aa25.6■■□□□ 1.69
USHBP1-209ENST00000598570 ROBO1Q9Y6N7 1651 aa25.58■■□□□ 1.69
USHBP1-209ENST00000598570 MST1RQ04912 1400 aa25.58■■□□□ 1.69
USHBP1-209ENST00000598570 C14orf37Q86TY3 774 aa25.57■■□□□ 1.68
USHBP1-209ENST00000598570 WAPLQ7Z5K2 1190 aa25.55■■□□□ 1.68
USHBP1-209ENST00000598570 STK26Q9P289 416 aa25.55■■□□□ 1.68
USHBP1-209ENST00000598570 CDC42BPGQ6DT37 1551 aa25.53■■□□□ 1.68
USHBP1-209ENST00000598570 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
USHBP1-209ENST00000598570 PLEKHH1Q9ULM0 1364 aa25.53■■□□□ 1.68
USHBP1-209ENST00000598570 BRINP3Q76B58 766 aa25.5■■□□□ 1.67
USHBP1-209ENST00000598570 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
USHBP1-209ENST00000598570 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms