RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 SLC26A8Q96RN1 970 aa18.59■□□□□ 0.57
C19orf54-208ENST00000598352 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
C19orf54-208ENST00000598352 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.56
C19orf54-208ENST00000598352 FOXD1Q16676 465 aa18.58■□□□□ 0.56
C19orf54-208ENST00000598352 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
C19orf54-208ENST00000598352 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.56
C19orf54-208ENST00000598352 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
C19orf54-208ENST00000598352 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
C19orf54-208ENST00000598352 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
C19orf54-208ENST00000598352 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
C19orf54-208ENST00000598352 LRRC7Q96NW7 1537 aa18.54■□□□□ 0.56
C19orf54-208ENST00000598352 PPP1R15AO75807 674 aaPredicted RBP18.54■□□□□ 0.56
C19orf54-208ENST00000598352 KCNA6P17658 529 aa18.54■□□□□ 0.56
C19orf54-208ENST00000598352 ADAMTS13Q76LX8 1427 aa18.53■□□□□ 0.56
C19orf54-208ENST00000598352 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
C19orf54-208ENST00000598352 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
C19orf54-208ENST00000598352 HRCP23327 699 aa18.52■□□□□ 0.56
C19orf54-208ENST00000598352 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
C19orf54-208ENST00000598352 ZNF326Q5BKZ1 582 aaKnown RBP18.5■□□□□ 0.55
C19orf54-208ENST00000598352 BCANQ96GW7 911 aa18.5■□□□□ 0.55
C19orf54-208ENST00000598352 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
C19orf54-208ENST00000598352 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
C19orf54-208ENST00000598352 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
C19orf54-208ENST00000598352 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
C19orf54-208ENST00000598352 RPGRIP1LQ68CZ1 1315 aa18.45■□□□□ 0.54
C19orf54-208ENST00000598352 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
C19orf54-208ENST00000598352 SETBP1Q9Y6X0 1596 aa18.44■□□□□ 0.54
C19orf54-208ENST00000598352 CCDC144AA2RUR9 1427 aa18.44■□□□□ 0.54
C19orf54-208ENST00000598352 TOM1O60784 492 aa18.44■□□□□ 0.54
C19orf54-208ENST00000598352 KIF1BO60333 1816 aa18.44■□□□□ 0.54
C19orf54-208ENST00000598352 PIK3R4Q99570 1358 aa18.43■□□□□ 0.54
C19orf54-208ENST00000598352 DIP2AQ14689 1571 aa18.43■□□□□ 0.54
C19orf54-208ENST00000598352 PTPRUQ92729 1446 aa18.43■□□□□ 0.54
C19orf54-208ENST00000598352 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
C19orf54-208ENST00000598352 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
C19orf54-208ENST00000598352 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
C19orf54-208ENST00000598352 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
C19orf54-208ENST00000598352 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
C19orf54-208ENST00000598352 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
C19orf54-208ENST00000598352 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
C19orf54-208ENST00000598352 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
C19orf54-208ENST00000598352 METP08581 1390 aa18.4■□□□□ 0.54
C19orf54-208ENST00000598352 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
C19orf54-208ENST00000598352 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
C19orf54-208ENST00000598352 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
C19orf54-208ENST00000598352 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
C19orf54-208ENST00000598352 PPLO60437 1756 aa18.35■□□□□ 0.53
C19orf54-208ENST00000598352 NCOA3Q9Y6Q9 1424 aa18.34■□□□□ 0.53
C19orf54-208ENST00000598352 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
C19orf54-208ENST00000598352 HSPA1LP34931 641 aa18.32■□□□□ 0.52
C19orf54-208ENST00000598352 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
C19orf54-208ENST00000598352 SETD1AO15047 1707 aaKnown RBP18.3■□□□□ 0.52
C19orf54-208ENST00000598352 MSH6P52701 1360 aa18.3■□□□□ 0.52
C19orf54-208ENST00000598352 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
C19orf54-208ENST00000598352 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
C19orf54-208ENST00000598352 IFT172Q9UG01 1749 aa18.28■□□□□ 0.52
C19orf54-208ENST00000598352 PIK3C2GO75747 1445 aa18.27■□□□□ 0.52
C19orf54-208ENST00000598352 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.52
C19orf54-208ENST00000598352 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
C19orf54-208ENST00000598352 SLAIN2Q9P270 581 aa18.26■□□□□ 0.51
C19orf54-208ENST00000598352 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
C19orf54-208ENST00000598352 C14orf93Q9H972 538 aaKnown RBP18.24■□□□□ 0.51
C19orf54-208ENST00000598352 MYOM2P54296 1465 aa18.24■□□□□ 0.51
C19orf54-208ENST00000598352 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
C19orf54-208ENST00000598352 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
C19orf54-208ENST00000598352 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
C19orf54-208ENST00000598352 CADPS2Q86UW7 1296 aa18.22■□□□□ 0.51
C19orf54-208ENST00000598352 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
C19orf54-208ENST00000598352 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
C19orf54-208ENST00000598352 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
C19orf54-208ENST00000598352 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
C19orf54-208ENST00000598352 DCCP43146 1447 aa18.21■□□□□ 0.51
C19orf54-208ENST00000598352 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
C19orf54-208ENST00000598352 ADGRL3Q9HAR2 1447 aa18.2■□□□□ 0.5
C19orf54-208ENST00000598352 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
C19orf54-208ENST00000598352 TECPR2O15040 1411 aa18.19■□□□□ 0.5
C19orf54-208ENST00000598352 ATF3P18847 181 aa18.19■□□□□ 0.5
C19orf54-208ENST00000598352 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
C19orf54-208ENST00000598352 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
C19orf54-208ENST00000598352 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
C19orf54-208ENST00000598352 STK26Q9P289 416 aa18.17■□□□□ 0.5
C19orf54-208ENST00000598352 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
C19orf54-208ENST00000598352 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
C19orf54-208ENST00000598352 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
C19orf54-208ENST00000598352 MST1RQ04912 1400 aa18.15■□□□□ 0.5
C19orf54-208ENST00000598352 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
C19orf54-208ENST00000598352 WAPLQ7Z5K2 1190 aa18.14■□□□□ 0.49
C19orf54-208ENST00000598352 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
C19orf54-208ENST00000598352 NALCNQ8IZF0 1738 aa18.13■□□□□ 0.49
C19orf54-208ENST00000598352 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
C19orf54-208ENST00000598352 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
C19orf54-208ENST00000598352 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
C19orf54-208ENST00000598352 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
C19orf54-208ENST00000598352 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
C19orf54-208ENST00000598352 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
C19orf54-208ENST00000598352 LAMC1P11047 1609 aa18.09■□□□□ 0.49
C19orf54-208ENST00000598352 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
C19orf54-208ENST00000598352 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
C19orf54-208ENST00000598352 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
C19orf54-208ENST00000598352 DLC1Q96QB1 1528 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms