RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 KCNA6P17658 529 aa34.76■■■■□ 3.16
SSBP4-205ENST00000598159 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.76■■■■□ 3.16
SSBP4-205ENST00000598159 ZFYVE9O95405 1425 aa34.75■■■■□ 3.15
SSBP4-205ENST00000598159 RIMS2Q9UQ26 1411 aa34.75■■■■□ 3.15
SSBP4-205ENST00000598159 PPP1R15AO75807 674 aaPredicted RBP34.74■■■■□ 3.15
SSBP4-205ENST00000598159 PLEKHG1Q9ULL1 1385 aa34.71■■■■□ 3.15
SSBP4-205ENST00000598159 HFM1A2PYH4 1435 aa34.68■■■■□ 3.14
SSBP4-205ENST00000598159 HSPA1LP34931 641 aa34.64■■■■□ 3.14
SSBP4-205ENST00000598159 TRIM52Q96A61 297 aa34.64■■■■□ 3.14
SSBP4-205ENST00000598159 TBX22Q9Y458 520 aa34.64■■■■□ 3.14
SSBP4-205ENST00000598159 DISP3Q9P2K9 1392 aa34.63■■■■□ 3.13
SSBP4-205ENST00000598159 ALKQ9UM73 1620 aa34.63■■■■□ 3.13
SSBP4-205ENST00000598159 PROSER2Q86WR7 435 aaPredicted RBP34.63■■■■□ 3.13
SSBP4-205ENST00000598159 SENP3Q9H4L4 574 aaPredicted RBP34.62■■■■□ 3.13
SSBP4-205ENST00000598159 SPHKAPQ2M3C7 1700 aa34.61■■■■□ 3.13
SSBP4-205ENST00000598159 NUTM2DQ5VT03 806 aaPredicted RBP34.6■■■■□ 3.13
SSBP4-205ENST00000598159 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
SSBP4-205ENST00000598159 TMEM94Q12767 1356 aa34.58■■■■□ 3.13
SSBP4-205ENST00000598159 NWD1Q149M9 1564 aa34.53■■■■□ 3.12
SSBP4-205ENST00000598159 NKTRP30414 1462 aaKnown RBP34.53■■■■□ 3.12
SSBP4-205ENST00000598159 ZNF326Q5BKZ1 582 aaKnown RBP34.53■■■■□ 3.12
SSBP4-205ENST00000598159 SLC4A1APQ9BWU0 796 aaKnown RBP34.53■■■■□ 3.12
SSBP4-205ENST00000598159 CHD2O14647 1828 aaKnown RBP34.53■■■■□ 3.12
SSBP4-205ENST00000598159 ADAMTS13Q76LX8 1427 aa34.5■■■■□ 3.11
SSBP4-205ENST00000598159 RBM33Q96EV2 1170 aaKnown RBP34.49■■■■□ 3.11
SSBP4-205ENST00000598159 PIK3R4Q99570 1358 aa34.49■■■■□ 3.11
SSBP4-205ENST00000598159 TRPM2O94759 1503 aa34.47■■■■□ 3.11
SSBP4-205ENST00000598159 DIP2AQ14689 1571 aa34.47■■■■□ 3.11
SSBP4-205ENST00000598159 CLTCL1P53675 1640 aa34.44■■■■□ 3.1
SSBP4-205ENST00000598159 MSH6P52701 1360 aa34.42■■■■□ 3.1
SSBP4-205ENST00000598159 KIF1BO60333 1816 aa34.41■■■■□ 3.1
SSBP4-205ENST00000598159 FAM135BQ49AJ0 1406 aa34.41■■■■□ 3.1
SSBP4-205ENST00000598159 NCOA3Q9Y6Q9 1424 aa34.41■■■■□ 3.1
SSBP4-205ENST00000598159 ACIN1Q9UKV3 1341 aaKnown RBP34.38■■■■□ 3.09
SSBP4-205ENST00000598159 AMOTL2Q9Y2J4 779 aa34.37■■■■□ 3.09
SSBP4-205ENST00000598159 ILDR2Q71H61 639 aa34.36■■■■□ 3.09
SSBP4-205ENST00000598159 SETBP1Q9Y6X0 1596 aa34.34■■■■□ 3.09
SSBP4-205ENST00000598159 VGFO15240 615 aaPredicted RBP34.33■■■■□ 3.09
SSBP4-205ENST00000598159 MPHOSPH9Q99550 1183 aa34.33■■■■□ 3.09
SSBP4-205ENST00000598159 SLAIN2Q9P270 581 aa34.33■■■■□ 3.09
SSBP4-205ENST00000598159 NEXMIFQ5QGS0 1516 aa34.32■■■■□ 3.08
SSBP4-205ENST00000598159 RPGRIP1LQ68CZ1 1315 aa34.31■■■■□ 3.08
SSBP4-205ENST00000598159 C14orf37Q86TY3 774 aa34.31■■■■□ 3.08
SSBP4-205ENST00000598159 NRXN3Q9Y4C0 1643 aa34.3■■■■□ 3.08
SSBP4-205ENST00000598159 PTPRUQ92729 1446 aa34.3■■■■□ 3.08
SSBP4-205ENST00000598159 FOXD1Q16676 465 aa34.29■■■■□ 3.08
SSBP4-205ENST00000598159 C19orf44Q9H6X5 657 aa34.29■■■■□ 3.08
SSBP4-205ENST00000598159 SETD5Q9C0A6 1442 aa34.25■■■■□ 3.07
SSBP4-205ENST00000598159 MED1Q15648 1581 aaPredicted RBP34.24■■■■□ 3.07
SSBP4-205ENST00000598159 CADPS2Q86UW7 1296 aa34.24■■■■□ 3.07
SSBP4-205ENST00000598159 METP08581 1390 aa34.23■■■■□ 3.07
SSBP4-205ENST00000598159 ROBO1Q9Y6N7 1651 aa34.23■■■■□ 3.07
SSBP4-205ENST00000598159 ATF3P18847 181 aa34.22■■■■□ 3.07
SSBP4-205ENST00000598159 CCDC144AA2RUR9 1427 aa34.19■■■■□ 3.06
SSBP4-205ENST00000598159 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.17■■■■□ 3.06
SSBP4-205ENST00000598159 XRN1Q8IZH2 1706 aaKnown RBP34.16■■■■□ 3.06
SSBP4-205ENST00000598159 SOCS7O14512 581 aa34.13■■■■□ 3.05
SSBP4-205ENST00000598159 PHF23Q9BUL5 403 aaPredicted RBP34.13■■■■□ 3.05
SSBP4-205ENST00000598159 PPLO60437 1756 aa34.11■■■■□ 3.05
SSBP4-205ENST00000598159 RGL3Q3MIN7 710 aa34.11■■■■□ 3.05
SSBP4-205ENST00000598159 RAB3GAP2Q9H2M9 1393 aa34.09■■■■□ 3.05
SSBP4-205ENST00000598159 DCCP43146 1447 aa34.08■■■■□ 3.05
SSBP4-205ENST00000598159 SPATA31E1Q6ZUB1 1445 aa34.06■■■■□ 3.04
SSBP4-205ENST00000598159 PHLPP1O60346 1717 aa34.04■■■■□ 3.04
SSBP4-205ENST00000598159 ANKRD30BQ9BXX2 1392 aa34.04■■■■□ 3.04
SSBP4-205ENST00000598159 SETD1AO15047 1707 aaKnown RBP34.02■■■■□ 3.04
SSBP4-205ENST00000598159 ADGRF5Q8IZF2 1346 aa34.02■■■■□ 3.04
SSBP4-205ENST00000598159 HRCP23327 699 aa34.01■■■■□ 3.03
SSBP4-205ENST00000598159 ADGRL3Q9HAR2 1447 aa33.99■■■■□ 3.03
SSBP4-205ENST00000598159 BRINP3Q76B58 766 aa33.99■■■■□ 3.03
SSBP4-205ENST00000598159 JCADQ9P266 1359 aa33.98■■■■□ 3.03
SSBP4-205ENST00000598159 PTCH1Q13635 1447 aa33.97■■■■□ 3.03
SSBP4-205ENST00000598159 ROBO2Q9HCK4 1378 aa33.95■■■■□ 3.02
SSBP4-205ENST00000598159 PRAG1Q86YV5 1406 aa33.95■■■■□ 3.02
SSBP4-205ENST00000598159 MST1RQ04912 1400 aa33.94■■■■□ 3.02
SSBP4-205ENST00000598159 AHDC1Q5TGY3 1603 aaPredicted RBP33.93■■■■□ 3.02
SSBP4-205ENST00000598159 IFT172Q9UG01 1749 aa33.93■■■■□ 3.02
SSBP4-205ENST00000598159 COL16A1Q07092 1604 aaPredicted RBP33.92■■■■□ 3.02
SSBP4-205ENST00000598159 RGS17Q9UGC6 210 aaPredicted RBP33.89■■■■□ 3.02
SSBP4-205ENST00000598159 NALCNQ8IZF0 1738 aa33.89■■■■□ 3.02
SSBP4-205ENST00000598159 SPATA31A6Q5VVP1 1343 aa33.85■■■■□ 3.01
SSBP4-205ENST00000598159 PIK3C2GO75747 1445 aa33.85■■■■□ 3.01
SSBP4-205ENST00000598159 ASXL1Q8IXJ9 1541 aa33.84■■■■□ 3.01
SSBP4-205ENST00000598159 STK26Q9P289 416 aa33.83■■■■□ 3.01
SSBP4-205ENST00000598159 TMEM132EQ6IEE7 984 aa33.82■■■■□ 3
SSBP4-205ENST00000598159 C14orf93Q9H972 538 aaKnown RBP33.82■■■■□ 3
SSBP4-205ENST00000598159 LRPPRCP42704 1394 aaKnown RBP33.82■■■■□ 3
SSBP4-205ENST00000598159 ABCC11Q96J66 1382 aa33.81■■■■□ 3
SSBP4-205ENST00000598159 C1orf167Q5SNV9 1468 aa33.81■■■■□ 3
SSBP4-205ENST00000598159 LRRC59Q96AG4 307 aaKnown RBP33.8■■■■□ 3
SSBP4-205ENST00000598159 TECPR2O15040 1411 aa33.78■■■■□ 3
SSBP4-205ENST00000598159 WAPLQ7Z5K2 1190 aa33.76■■■□□ 2.99
SSBP4-205ENST00000598159 SIRT1Q96EB6 747 aa33.76■■■□□ 2.99
SSBP4-205ENST00000598159 MYOM2P54296 1465 aa33.76■■■□□ 2.99
SSBP4-205ENST00000598159 NRXN1Q9ULB1 1477 aa33.76■■■□□ 2.99
SSBP4-205ENST00000598159 NHSL1Q5SYE7 1610 aa33.75■■■□□ 2.99
SSBP4-205ENST00000598159 SHPRHQ149N8 1683 aa33.75■■■□□ 2.99
SSBP4-205ENST00000598159 CFAP70Q5T0N1 1121 aa33.74■■■□□ 2.99
SSBP4-205ENST00000598159 ORAI2Q96SN7 254 aa33.73■■■□□ 2.99
SSBP4-205ENST00000598159 YTHDC2Q9H6S0 1430 aaKnown RBP33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms