RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
PDE4C-213ENST00000598111 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
PDE4C-213ENST00000598111 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
PDE4C-213ENST00000598111 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
PDE4C-213ENST00000598111 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
PDE4C-213ENST00000598111 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
PDE4C-213ENST00000598111 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDE4C-213ENST00000598111 BCANQ96GW7 911 aa18.35■□□□□ 0.53
PDE4C-213ENST00000598111 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
PDE4C-213ENST00000598111 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
PDE4C-213ENST00000598111 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
PDE4C-213ENST00000598111 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
PDE4C-213ENST00000598111 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
PDE4C-213ENST00000598111 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
PDE4C-213ENST00000598111 SLC26A8Q96RN1 970 aa18.3■□□□□ 0.52
PDE4C-213ENST00000598111 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
PDE4C-213ENST00000598111 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
PDE4C-213ENST00000598111 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
PDE4C-213ENST00000598111 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
PDE4C-213ENST00000598111 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
PDE4C-213ENST00000598111 XIRP1Q702N8 1843 aaKnown RBP18.29■□□□□ 0.52
PDE4C-213ENST00000598111 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
PDE4C-213ENST00000598111 PPLO60437 1756 aa18.28■□□□□ 0.52
PDE4C-213ENST00000598111 FOXD1Q16676 465 aa18.28■□□□□ 0.52
PDE4C-213ENST00000598111 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
PDE4C-213ENST00000598111 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
PDE4C-213ENST00000598111 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.52
PDE4C-213ENST00000598111 ADAMTS13Q76LX8 1427 aa18.25■□□□□ 0.51
PDE4C-213ENST00000598111 KCNA6P17658 529 aa18.23■□□□□ 0.51
PDE4C-213ENST00000598111 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
PDE4C-213ENST00000598111 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
PDE4C-213ENST00000598111 TOM1O60784 492 aa18.21■□□□□ 0.51
PDE4C-213ENST00000598111 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
PDE4C-213ENST00000598111 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
PDE4C-213ENST00000598111 TMEM94Q12767 1356 aa18.19■□□□□ 0.5
PDE4C-213ENST00000598111 XRN1Q8IZH2 1706 aaKnown RBP18.19■□□□□ 0.5
PDE4C-213ENST00000598111 ALKQ9UM73 1620 aa18.19■□□□□ 0.5
PDE4C-213ENST00000598111 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
PDE4C-213ENST00000598111 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
PDE4C-213ENST00000598111 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
PDE4C-213ENST00000598111 SPATA31E1Q6ZUB1 1445 aa18.17■□□□□ 0.5
PDE4C-213ENST00000598111 HRCP23327 699 aa18.17■□□□□ 0.5
PDE4C-213ENST00000598111 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
PDE4C-213ENST00000598111 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
PDE4C-213ENST00000598111 MSH6P52701 1360 aa18.14■□□□□ 0.49
PDE4C-213ENST00000598111 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
PDE4C-213ENST00000598111 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
PDE4C-213ENST00000598111 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
PDE4C-213ENST00000598111 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
PDE4C-213ENST00000598111 METP08581 1390 aa18.11■□□□□ 0.49
PDE4C-213ENST00000598111 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
PDE4C-213ENST00000598111 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
PDE4C-213ENST00000598111 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
PDE4C-213ENST00000598111 LAMC1P11047 1609 aa18.09■□□□□ 0.49
PDE4C-213ENST00000598111 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
PDE4C-213ENST00000598111 MYOM2P54296 1465 aa18.08■□□□□ 0.49
PDE4C-213ENST00000598111 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
PDE4C-213ENST00000598111 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
PDE4C-213ENST00000598111 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
PDE4C-213ENST00000598111 ADGRF5Q8IZF2 1346 aa18.06■□□□□ 0.48
PDE4C-213ENST00000598111 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
PDE4C-213ENST00000598111 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
PDE4C-213ENST00000598111 HSPA1LP34931 641 aa18.03■□□□□ 0.48
PDE4C-213ENST00000598111 DCCP43146 1447 aa18.03■□□□□ 0.48
PDE4C-213ENST00000598111 PRAG1Q86YV5 1406 aa18.03■□□□□ 0.48
PDE4C-213ENST00000598111 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.48
PDE4C-213ENST00000598111 ASXL1Q8IXJ9 1541 aa18.02■□□□□ 0.47
PDE4C-213ENST00000598111 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
PDE4C-213ENST00000598111 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
PDE4C-213ENST00000598111 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
PDE4C-213ENST00000598111 ATF3P18847 181 aa17.99■□□□□ 0.47
PDE4C-213ENST00000598111 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
PDE4C-213ENST00000598111 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
PDE4C-213ENST00000598111 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
PDE4C-213ENST00000598111 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
PDE4C-213ENST00000598111 SLAIN2Q9P270 581 aa17.97■□□□□ 0.47
PDE4C-213ENST00000598111 TECPR2O15040 1411 aa17.96■□□□□ 0.47
PDE4C-213ENST00000598111 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
PDE4C-213ENST00000598111 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
PDE4C-213ENST00000598111 MED1Q15648 1581 aaPredicted RBP17.93■□□□□ 0.46
PDE4C-213ENST00000598111 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
PDE4C-213ENST00000598111 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
PDE4C-213ENST00000598111 MST1RQ04912 1400 aa17.92■□□□□ 0.46
PDE4C-213ENST00000598111 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
PDE4C-213ENST00000598111 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
PDE4C-213ENST00000598111 C14orf93Q9H972 538 aaKnown RBP17.92■□□□□ 0.46
PDE4C-213ENST00000598111 STK26Q9P289 416 aa17.92■□□□□ 0.46
PDE4C-213ENST00000598111 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
PDE4C-213ENST00000598111 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
PDE4C-213ENST00000598111 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
PDE4C-213ENST00000598111 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
PDE4C-213ENST00000598111 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
PDE4C-213ENST00000598111 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
PDE4C-213ENST00000598111 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
PDE4C-213ENST00000598111 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
PDE4C-213ENST00000598111 NHSL1Q5SYE7 1610 aa17.89■□□□□ 0.45
PDE4C-213ENST00000598111 KIAA1210Q9ULL0 1709 aa17.89■□□□□ 0.45
PDE4C-213ENST00000598111 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
PDE4C-213ENST00000598111 FMN2Q9NZ56 1722 aa17.86■□□□□ 0.45
PDE4C-213ENST00000598111 C1orf167Q5SNV9 1468 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms