RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
XRCC1-206ENST00000597811 PIP4K2BP78356 416 aa23.16■■□□□ 1.3
XRCC1-206ENST00000597811 HFM1A2PYH4 1435 aa23.16■■□□□ 1.3
XRCC1-206ENST00000597811 CHGAP10645 457 aaKnown RBP23.15■■□□□ 1.3
XRCC1-206ENST00000597811 NWD1Q149M9 1564 aa23.14■■□□□ 1.29
XRCC1-206ENST00000597811 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.29
XRCC1-206ENST00000597811 CHD2O14647 1828 aaKnown RBP23.13■■□□□ 1.29
XRCC1-206ENST00000597811 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
XRCC1-206ENST00000597811 BCANQ96GW7 911 aa23.11■■□□□ 1.29
XRCC1-206ENST00000597811 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
XRCC1-206ENST00000597811 KCNA6P17658 529 aa23.1■■□□□ 1.29
XRCC1-206ENST00000597811 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
XRCC1-206ENST00000597811 CLTCL1P53675 1640 aa23.1■■□□□ 1.29
XRCC1-206ENST00000597811 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
XRCC1-206ENST00000597811 TRPM2O94759 1503 aa23.08■■□□□ 1.29
XRCC1-206ENST00000597811 HSPA1LP34931 641 aa23.08■■□□□ 1.29
XRCC1-206ENST00000597811 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
XRCC1-206ENST00000597811 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
XRCC1-206ENST00000597811 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
XRCC1-206ENST00000597811 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.07■■□□□ 1.28
XRCC1-206ENST00000597811 KIF1BO60333 1816 aa23.07■■□□□ 1.28
XRCC1-206ENST00000597811 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
XRCC1-206ENST00000597811 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
XRCC1-206ENST00000597811 DIP2AQ14689 1571 aa23.05■■□□□ 1.28
XRCC1-206ENST00000597811 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
XRCC1-206ENST00000597811 RBM33Q96EV2 1170 aaKnown RBP23.02■■□□□ 1.28
XRCC1-206ENST00000597811 PROSER2Q86WR7 435 aaPredicted RBP23.01■■□□□ 1.27
XRCC1-206ENST00000597811 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
XRCC1-206ENST00000597811 NEXMIFQ5QGS0 1516 aa22.98■■□□□ 1.27
XRCC1-206ENST00000597811 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
XRCC1-206ENST00000597811 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
XRCC1-206ENST00000597811 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
XRCC1-206ENST00000597811 ROBO1Q9Y6N7 1651 aa22.94■■□□□ 1.26
XRCC1-206ENST00000597811 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
XRCC1-206ENST00000597811 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
XRCC1-206ENST00000597811 PIK3R4Q99570 1358 aa22.94■■□□□ 1.26
XRCC1-206ENST00000597811 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
XRCC1-206ENST00000597811 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
XRCC1-206ENST00000597811 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
XRCC1-206ENST00000597811 MSH6P52701 1360 aa22.91■■□□□ 1.26
XRCC1-206ENST00000597811 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
XRCC1-206ENST00000597811 PPLO60437 1756 aa22.89■■□□□ 1.26
XRCC1-206ENST00000597811 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.26
XRCC1-206ENST00000597811 FOXD1Q16676 465 aa22.89■■□□□ 1.25
XRCC1-206ENST00000597811 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
XRCC1-206ENST00000597811 SETD1AO15047 1707 aaKnown RBP22.87■■□□□ 1.25
XRCC1-206ENST00000597811 ACIN1Q9UKV3 1341 aaKnown RBP22.86■■□□□ 1.25
XRCC1-206ENST00000597811 AMOTL2Q9Y2J4 779 aa22.86■■□□□ 1.25
XRCC1-206ENST00000597811 RAB3GAP2Q9H2M9 1393 aa22.86■■□□□ 1.25
XRCC1-206ENST00000597811 METP08581 1390 aa22.85■■□□□ 1.25
XRCC1-206ENST00000597811 MPHOSPH9Q99550 1183 aa22.84■■□□□ 1.25
XRCC1-206ENST00000597811 C14orf37Q86TY3 774 aa22.81■■□□□ 1.24
XRCC1-206ENST00000597811 SLAIN2Q9P270 581 aa22.81■■□□□ 1.24
XRCC1-206ENST00000597811 PHLPP1O60346 1717 aa22.8■■□□□ 1.24
XRCC1-206ENST00000597811 IFT172Q9UG01 1749 aa22.8■■□□□ 1.24
XRCC1-206ENST00000597811 CCDC144AA2RUR9 1427 aa22.8■■□□□ 1.24
XRCC1-206ENST00000597811 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
XRCC1-206ENST00000597811 VGFO15240 615 aaPredicted RBP22.78■■□□□ 1.24
XRCC1-206ENST00000597811 C19orf44Q9H6X5 657 aa22.77■■□□□ 1.24
XRCC1-206ENST00000597811 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
XRCC1-206ENST00000597811 SPATA31E1Q6ZUB1 1445 aa22.76■■□□□ 1.23
XRCC1-206ENST00000597811 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
XRCC1-206ENST00000597811 SOCS7O14512 581 aa22.74■■□□□ 1.23
XRCC1-206ENST00000597811 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
XRCC1-206ENST00000597811 ATF3P18847 181 aa22.73■■□□□ 1.23
XRCC1-206ENST00000597811 DCCP43146 1447 aa22.73■■□□□ 1.23
XRCC1-206ENST00000597811 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
XRCC1-206ENST00000597811 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
XRCC1-206ENST00000597811 ADGRL3Q9HAR2 1447 aa22.7■■□□□ 1.22
XRCC1-206ENST00000597811 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
XRCC1-206ENST00000597811 HRCP23327 699 aa22.69■■□□□ 1.22
XRCC1-206ENST00000597811 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
XRCC1-206ENST00000597811 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
XRCC1-206ENST00000597811 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
XRCC1-206ENST00000597811 MST1RQ04912 1400 aa22.67■■□□□ 1.22
XRCC1-206ENST00000597811 PRAG1Q86YV5 1406 aa22.67■■□□□ 1.22
XRCC1-206ENST00000597811 ROBO2Q9HCK4 1378 aa22.66■■□□□ 1.22
XRCC1-206ENST00000597811 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
XRCC1-206ENST00000597811 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
XRCC1-206ENST00000597811 BRINP3Q76B58 766 aa22.64■■□□□ 1.21
XRCC1-206ENST00000597811 NHSL1Q5SYE7 1610 aa22.64■■□□□ 1.21
XRCC1-206ENST00000597811 JCADQ9P266 1359 aa22.63■■□□□ 1.21
XRCC1-206ENST00000597811 PIK3C2GO75747 1445 aa22.62■■□□□ 1.21
XRCC1-206ENST00000597811 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
XRCC1-206ENST00000597811 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
XRCC1-206ENST00000597811 RGS17Q9UGC6 210 aaPredicted RBP22.59■■□□□ 1.21
XRCC1-206ENST00000597811 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
XRCC1-206ENST00000597811 MYOM2P54296 1465 aa22.56■■□□□ 1.2
XRCC1-206ENST00000597811 TECPR2O15040 1411 aa22.56■■□□□ 1.2
XRCC1-206ENST00000597811 C1orf167Q5SNV9 1468 aa22.55■■□□□ 1.2
XRCC1-206ENST00000597811 LAMC1P11047 1609 aa22.55■■□□□ 1.2
XRCC1-206ENST00000597811 LRP6O75581 1613 aa22.54■■□□□ 1.2
XRCC1-206ENST00000597811 LRPPRCP42704 1394 aaKnown RBP22.54■■□□□ 1.2
XRCC1-206ENST00000597811 TMEM132EQ6IEE7 984 aa22.54■■□□□ 1.2
XRCC1-206ENST00000597811 CDC42BPGQ6DT37 1551 aa22.54■■□□□ 1.2
XRCC1-206ENST00000597811 STK26Q9P289 416 aa22.53■■□□□ 1.2
XRCC1-206ENST00000597811 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
XRCC1-206ENST00000597811 SPATA31A6Q5VVP1 1343 aa22.51■■□□□ 1.19
XRCC1-206ENST00000597811 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
XRCC1-206ENST00000597811 YTHDC2Q9H6S0 1430 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms