RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
IRF3-211ENST00000596644 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.14
IRF3-211ENST00000596644 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
IRF3-211ENST00000596644 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
IRF3-211ENST00000596644 CCDC144AA2RUR9 1427 aa22.13■■□□□ 1.13
IRF3-211ENST00000596644 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.12■■□□□ 1.13
IRF3-211ENST00000596644 LTBP4Q8N2S1 1624 aa22.11■■□□□ 1.13
IRF3-211ENST00000596644 BCANQ96GW7 911 aa22.11■■□□□ 1.13
IRF3-211ENST00000596644 NUTM2DQ5VT03 806 aaPredicted RBP22.09■■□□□ 1.13
IRF3-211ENST00000596644 CERKQ8TCT0 537 aa22.09■■□□□ 1.13
IRF3-211ENST00000596644 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.12
IRF3-211ENST00000596644 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
IRF3-211ENST00000596644 NEXMIFQ5QGS0 1516 aa22.05■■□□□ 1.12
IRF3-211ENST00000596644 SLC26A8Q96RN1 970 aa22.04■■□□□ 1.12
IRF3-211ENST00000596644 CPS1P31327 1500 aa22.04■■□□□ 1.12
IRF3-211ENST00000596644 STRCP1A6NGW2 1772 aa22■■□□□ 1.11
IRF3-211ENST00000596644 RPGRIP1LQ68CZ1 1315 aa22■■□□□ 1.11
IRF3-211ENST00000596644 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
IRF3-211ENST00000596644 PPLO60437 1756 aa21.99■■□□□ 1.11
IRF3-211ENST00000596644 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
IRF3-211ENST00000596644 SPATA31E1Q6ZUB1 1445 aa21.98■■□□□ 1.11
IRF3-211ENST00000596644 IQSEC2Q5JU85 1478 aa21.98■■□□□ 1.11
IRF3-211ENST00000596644 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
IRF3-211ENST00000596644 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
IRF3-211ENST00000596644 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
IRF3-211ENST00000596644 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
IRF3-211ENST00000596644 TBX22Q9Y458 520 aa21.95■■□□□ 1.1
IRF3-211ENST00000596644 NRXN3Q9Y4C0 1643 aa21.95■■□□□ 1.1
IRF3-211ENST00000596644 FBXO41Q8TF61 875 aa21.94■■□□□ 1.1
IRF3-211ENST00000596644 IFT172Q9UG01 1749 aa21.94■■□□□ 1.1
IRF3-211ENST00000596644 KCNA6P17658 529 aa21.93■■□□□ 1.1
IRF3-211ENST00000596644 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
IRF3-211ENST00000596644 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
IRF3-211ENST00000596644 LRRC7Q96NW7 1537 aa21.91■■□□□ 1.1
IRF3-211ENST00000596644 NKTRP30414 1462 aaKnown RBP21.9■■□□□ 1.1
IRF3-211ENST00000596644 PIK3R4Q99570 1358 aa21.89■■□□□ 1.1
IRF3-211ENST00000596644 ILDR1Q86SU0 546 aaPredicted RBP21.88■■□□□ 1.09
IRF3-211ENST00000596644 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
IRF3-211ENST00000596644 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
IRF3-211ENST00000596644 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
IRF3-211ENST00000596644 XIRP1Q702N8 1843 aaKnown RBP21.84■■□□□ 1.09
IRF3-211ENST00000596644 METP08581 1390 aa21.84■■□□□ 1.09
IRF3-211ENST00000596644 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
IRF3-211ENST00000596644 SETD1AO15047 1707 aaKnown RBP21.83■■□□□ 1.09
IRF3-211ENST00000596644 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
IRF3-211ENST00000596644 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
IRF3-211ENST00000596644 MYOM2P54296 1465 aa21.83■■□□□ 1.08
IRF3-211ENST00000596644 PTPRUQ92729 1446 aa21.82■■□□□ 1.08
IRF3-211ENST00000596644 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
IRF3-211ENST00000596644 XRN1Q8IZH2 1706 aaKnown RBP21.81■■□□□ 1.08
IRF3-211ENST00000596644 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
IRF3-211ENST00000596644 PIK3C2GO75747 1445 aa21.8■■□□□ 1.08
IRF3-211ENST00000596644 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
IRF3-211ENST00000596644 TOM1O60784 492 aa21.78■■□□□ 1.08
IRF3-211ENST00000596644 DCAF11Q8TEB1 546 aa21.78■■□□□ 1.08
IRF3-211ENST00000596644 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
IRF3-211ENST00000596644 KDM2AQ9Y2K7 1162 aa21.76■■□□□ 1.07
IRF3-211ENST00000596644 LAMC1P11047 1609 aa21.76■■□□□ 1.07
IRF3-211ENST00000596644 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
IRF3-211ENST00000596644 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
IRF3-211ENST00000596644 MSH6P52701 1360 aa21.74■■□□□ 1.07
IRF3-211ENST00000596644 STAC3Q96MF2 364 aa21.73■■□□□ 1.07
IRF3-211ENST00000596644 NCOA3Q9Y6Q9 1424 aa21.72■■□□□ 1.07
IRF3-211ENST00000596644 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
IRF3-211ENST00000596644 SIN3AQ96ST3 1273 aa21.72■■□□□ 1.07
IRF3-211ENST00000596644 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
IRF3-211ENST00000596644 ASXL1Q8IXJ9 1541 aa21.7■■□□□ 1.07
IRF3-211ENST00000596644 C14orf93Q9H972 538 aaKnown RBP21.7■■□□□ 1.06
IRF3-211ENST00000596644 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
IRF3-211ENST00000596644 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
IRF3-211ENST00000596644 TMEM132EQ6IEE7 984 aa21.68■■□□□ 1.06
IRF3-211ENST00000596644 PRAG1Q86YV5 1406 aa21.67■■□□□ 1.06
IRF3-211ENST00000596644 STK26Q9P289 416 aa21.67■■□□□ 1.06
IRF3-211ENST00000596644 KNDC1Q76NI1 1749 aa21.66■■□□□ 1.06
IRF3-211ENST00000596644 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.66■■□□□ 1.06
IRF3-211ENST00000596644 LRPPRCP42704 1394 aaKnown RBP21.66■■□□□ 1.06
IRF3-211ENST00000596644 ROBO2Q9HCK4 1378 aa21.66■■□□□ 1.06
IRF3-211ENST00000596644 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
IRF3-211ENST00000596644 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
IRF3-211ENST00000596644 TECPR2O15040 1411 aa21.63■■□□□ 1.05
IRF3-211ENST00000596644 NALCNQ8IZF0 1738 aa21.63■■□□□ 1.05
IRF3-211ENST00000596644 ATF3P18847 181 aa21.63■■□□□ 1.05
IRF3-211ENST00000596644 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
IRF3-211ENST00000596644 ABCC11Q96J66 1382 aa21.62■■□□□ 1.05
IRF3-211ENST00000596644 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
IRF3-211ENST00000596644 CADPS2Q86UW7 1296 aa21.61■■□□□ 1.05
IRF3-211ENST00000596644 DCCP43146 1447 aa21.61■■□□□ 1.05
IRF3-211ENST00000596644 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
IRF3-211ENST00000596644 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
IRF3-211ENST00000596644 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
IRF3-211ENST00000596644 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
IRF3-211ENST00000596644 ROBO1Q9Y6N7 1651 aa21.57■■□□□ 1.04
IRF3-211ENST00000596644 WAPLQ7Z5K2 1190 aa21.56■■□□□ 1.04
IRF3-211ENST00000596644 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
IRF3-211ENST00000596644 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
IRF3-211ENST00000596644 PLEKHH1Q9ULM0 1364 aa21.54■■□□□ 1.04
IRF3-211ENST00000596644 HSPA1LP34931 641 aa21.54■■□□□ 1.04
IRF3-211ENST00000596644 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
IRF3-211ENST00000596644 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
IRF3-211ENST00000596644 PRAM1Q96QH2 718 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms