RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 PLEKHG1Q9ULL1 1385 aa38.35■■■■□ 3.73
ZNF558-203ENST00000595786 CHGAP10645 457 aaKnown RBP38.35■■■■□ 3.73
ZNF558-203ENST00000595786 HFM1A2PYH4 1435 aa38.35■■■■□ 3.73
ZNF558-203ENST00000595786 PIP4K2BP78356 416 aa38.34■■■■□ 3.73
ZNF558-203ENST00000595786 PPP1R15AO75807 674 aaPredicted RBP38.32■■■■□ 3.72
ZNF558-203ENST00000595786 BCANQ96GW7 911 aa38.32■■■■□ 3.72
ZNF558-203ENST00000595786 SCAF1Q9H7N4 1312 aaKnown RBP38.31■■■■□ 3.72
ZNF558-203ENST00000595786 ALKQ9UM73 1620 aa38.27■■■■□ 3.72
ZNF558-203ENST00000595786 SPHKAPQ2M3C7 1700 aa38.25■■■■□ 3.71
ZNF558-203ENST00000595786 TBX22Q9Y458 520 aa38.25■■■■□ 3.71
ZNF558-203ENST00000595786 HSPA1LP34931 641 aa38.21■■■■□ 3.71
ZNF558-203ENST00000595786 XIRP1Q702N8 1843 aaKnown RBP38.2■■■■□ 3.71
ZNF558-203ENST00000595786 NKTRP30414 1462 aaKnown RBP38.2■■■■□ 3.71
ZNF558-203ENST00000595786 DISP3Q9P2K9 1392 aa38.19■■■■□ 3.7
ZNF558-203ENST00000595786 NWD1Q149M9 1564 aa38.19■■■■□ 3.7
ZNF558-203ENST00000595786 PROSER2Q86WR7 435 aaPredicted RBP38.19■■■■□ 3.7
ZNF558-203ENST00000595786 TMEM94Q12767 1356 aa38.19■■■■□ 3.7
ZNF558-203ENST00000595786 TRIM52Q96A61 297 aa38.18■■■■□ 3.7
ZNF558-203ENST00000595786 CHD2O14647 1828 aaKnown RBP38.13■■■■□ 3.69
ZNF558-203ENST00000595786 ADAMTS13Q76LX8 1427 aa38.12■■■■□ 3.69
ZNF558-203ENST00000595786 TRPM2O94759 1503 aa38.12■■■■□ 3.69
ZNF558-203ENST00000595786 PIK3R4Q99570 1358 aa38.12■■■■□ 3.69
ZNF558-203ENST00000595786 NUTM2DQ5VT03 806 aaPredicted RBP38.12■■■■□ 3.69
ZNF558-203ENST00000595786 DIP2AQ14689 1571 aa38.11■■■■□ 3.69
ZNF558-203ENST00000595786 SLC4A1APQ9BWU0 796 aaKnown RBP38.09■■■■□ 3.69
ZNF558-203ENST00000595786 SENP3Q9H4L4 574 aaPredicted RBP38.08■■■■□ 3.69
ZNF558-203ENST00000595786 ZNF326Q5BKZ1 582 aaKnown RBP38.07■■■■□ 3.68
ZNF558-203ENST00000595786 CLTCL1P53675 1640 aa38.05■■■■□ 3.68
ZNF558-203ENST00000595786 ACIN1Q9UKV3 1341 aaKnown RBP38.04■■■■□ 3.68
ZNF558-203ENST00000595786 NCOA3Q9Y6Q9 1424 aa38.04■■■■□ 3.68
ZNF558-203ENST00000595786 FAM135BQ49AJ0 1406 aa38.02■■■■□ 3.68
ZNF558-203ENST00000595786 MSH6P52701 1360 aa38■■■■□ 3.67
ZNF558-203ENST00000595786 KIF1BO60333 1816 aa37.99■■■■□ 3.67
ZNF558-203ENST00000595786 RBM33Q96EV2 1170 aaKnown RBP37.99■■■■□ 3.67
ZNF558-203ENST00000595786 SETBP1Q9Y6X0 1596 aa37.97■■■■□ 3.67
ZNF558-203ENST00000595786 NEXMIFQ5QGS0 1516 aa37.92■■■■□ 3.66
ZNF558-203ENST00000595786 AMOTL2Q9Y2J4 779 aa37.92■■■■□ 3.66
ZNF558-203ENST00000595786 RPGRIP1LQ68CZ1 1315 aa37.91■■■■□ 3.66
ZNF558-203ENST00000595786 NRXN3Q9Y4C0 1643 aa37.9■■■■□ 3.66
ZNF558-203ENST00000595786 VGFO15240 615 aaPredicted RBP37.88■■■■□ 3.65
ZNF558-203ENST00000595786 SLAIN2Q9P270 581 aa37.88■■■■□ 3.65
ZNF558-203ENST00000595786 ILDR2Q71H61 639 aa37.87■■■■□ 3.65
ZNF558-203ENST00000595786 MPHOSPH9Q99550 1183 aa37.87■■■■□ 3.65
ZNF558-203ENST00000595786 PTPRUQ92729 1446 aa37.87■■■■□ 3.65
ZNF558-203ENST00000595786 C19orf44Q9H6X5 657 aa37.86■■■■□ 3.65
ZNF558-203ENST00000595786 SETD5Q9C0A6 1442 aa37.84■■■■□ 3.65
ZNF558-203ENST00000595786 C14orf37Q86TY3 774 aa37.83■■■■□ 3.65
ZNF558-203ENST00000595786 MED1Q15648 1581 aaPredicted RBP37.82■■■■□ 3.65
ZNF558-203ENST00000595786 ROBO1Q9Y6N7 1651 aa37.8■■■■□ 3.64
ZNF558-203ENST00000595786 FOXD1Q16676 465 aa37.8■■■■□ 3.64
ZNF558-203ENST00000595786 CADPS2Q86UW7 1296 aa37.8■■■■□ 3.64
ZNF558-203ENST00000595786 METP08581 1390 aa37.8■■■■□ 3.64
ZNF558-203ENST00000595786 XRN1Q8IZH2 1706 aaKnown RBP37.78■■■■□ 3.64
ZNF558-203ENST00000595786 CCDC144AA2RUR9 1427 aa37.77■■■■□ 3.64
ZNF558-203ENST00000595786 ATF3P18847 181 aa37.75■■■■□ 3.63
ZNF558-203ENST00000595786 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.73■■■■□ 3.63
ZNF558-203ENST00000595786 DCCP43146 1447 aa37.7■■■■□ 3.63
ZNF558-203ENST00000595786 PPLO60437 1756 aa37.69■■■■□ 3.62
ZNF558-203ENST00000595786 SOCS7O14512 581 aa37.66■■■■□ 3.62
ZNF558-203ENST00000595786 SPATA31E1Q6ZUB1 1445 aa37.66■■■■□ 3.62
ZNF558-203ENST00000595786 RAB3GAP2Q9H2M9 1393 aa37.65■■■■□ 3.62
ZNF558-203ENST00000595786 PHF23Q9BUL5 403 aaPredicted RBP37.63■■■■□ 3.61
ZNF558-203ENST00000595786 ANKRD30BQ9BXX2 1392 aa37.62■■■■□ 3.61
ZNF558-203ENST00000595786 SETD1AO15047 1707 aaKnown RBP37.61■■■■□ 3.61
ZNF558-203ENST00000595786 HRCP23327 699 aa37.59■■■■□ 3.61
ZNF558-203ENST00000595786 RGL3Q3MIN7 710 aa37.59■■■■□ 3.61
ZNF558-203ENST00000595786 PRAG1Q86YV5 1406 aa37.59■■■■□ 3.61
ZNF558-203ENST00000595786 PTCH1Q13635 1447 aa37.58■■■■□ 3.61
ZNF558-203ENST00000595786 PHLPP1O60346 1717 aa37.58■■■■□ 3.61
ZNF558-203ENST00000595786 ADGRL3Q9HAR2 1447 aa37.57■■■■□ 3.6
ZNF558-203ENST00000595786 ADGRF5Q8IZF2 1346 aa37.54■■■■□ 3.6
ZNF558-203ENST00000595786 JCADQ9P266 1359 aa37.53■■■■□ 3.6
ZNF558-203ENST00000595786 BRINP3Q76B58 766 aa37.51■■■■□ 3.6
ZNF558-203ENST00000595786 AHDC1Q5TGY3 1603 aaPredicted RBP37.5■■■■□ 3.59
ZNF558-203ENST00000595786 MST1RQ04912 1400 aa37.5■■■■□ 3.59
ZNF558-203ENST00000595786 IFT172Q9UG01 1749 aa37.5■■■■□ 3.59
ZNF558-203ENST00000595786 ROBO2Q9HCK4 1378 aa37.49■■■■□ 3.59
ZNF558-203ENST00000595786 COL16A1Q07092 1604 aaPredicted RBP37.47■■■■□ 3.59
ZNF558-203ENST00000595786 NALCNQ8IZF0 1738 aa37.44■■■■□ 3.58
ZNF558-203ENST00000595786 PIK3C2GO75747 1445 aa37.42■■■■□ 3.58
ZNF558-203ENST00000595786 ASXL1Q8IXJ9 1541 aa37.4■■■■□ 3.58
ZNF558-203ENST00000595786 RGS17Q9UGC6 210 aaPredicted RBP37.39■■■■□ 3.58
ZNF558-203ENST00000595786 SPATA31A6Q5VVP1 1343 aa37.38■■■■□ 3.58
ZNF558-203ENST00000595786 TECPR2O15040 1411 aa37.37■■■■□ 3.57
ZNF558-203ENST00000595786 LRPPRCP42704 1394 aaKnown RBP37.37■■■■□ 3.57
ZNF558-203ENST00000595786 ABCC11Q96J66 1382 aa37.37■■■■□ 3.57
ZNF558-203ENST00000595786 C1orf167Q5SNV9 1468 aa37.34■■■■□ 3.57
ZNF558-203ENST00000595786 C14orf93Q9H972 538 aaKnown RBP37.34■■■■□ 3.57
ZNF558-203ENST00000595786 MYOM2P54296 1465 aa37.33■■■■□ 3.57
ZNF558-203ENST00000595786 NRXN1Q9ULB1 1477 aa37.33■■■■□ 3.57
ZNF558-203ENST00000595786 NHSL1Q5SYE7 1610 aa37.31■■■■□ 3.56
ZNF558-203ENST00000595786 SHPRHQ149N8 1683 aa37.3■■■■□ 3.56
ZNF558-203ENST00000595786 TMEM132EQ6IEE7 984 aa37.29■■■■□ 3.56
ZNF558-203ENST00000595786 LRRC59Q96AG4 307 aaKnown RBP37.29■■■■□ 3.56
ZNF558-203ENST00000595786 SIRT1Q96EB6 747 aa37.29■■■■□ 3.56
ZNF558-203ENST00000595786 STK26Q9P289 416 aa37.29■■■■□ 3.56
ZNF558-203ENST00000595786 STAC3Q96MF2 364 aa37.27■■■■□ 3.56
ZNF558-203ENST00000595786 YTHDC2Q9H6S0 1430 aaKnown RBP37.26■■■■□ 3.55
ZNF558-203ENST00000595786 KNDC1Q76NI1 1749 aa37.25■■■■□ 3.55
ZNF558-203ENST00000595786 LAMC1P11047 1609 aa37.23■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms