RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 LTKP29376 864 aa8.94□□□□□ -0.98
SSX4-201ENST00000595689 TMEM2Q9UHN6 1383 aa8.94□□□□□ -0.98
SSX4-201ENST00000595689 SPHKAPQ2M3C7 1700 aa8.94□□□□□ -0.98
SSX4-201ENST00000595689 NUP155O75694 1391 aa8.93□□□□□ -0.98
SSX4-201ENST00000595689 NAIPQ13075 1403 aa8.93□□□□□ -0.98
SSX4-201ENST00000595689 TXNDC2Q86VQ3 553 aa8.92□□□□□ -0.98
SSX4-201ENST00000595689 XIRP1Q702N8 1843 aaKnown RBP8.91□□□□□ -0.98
SSX4-201ENST00000595689 ALKQ9UM73 1620 aa8.91□□□□□ -0.98
SSX4-201ENST00000595689 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
SSX4-201ENST00000595689 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
SSX4-201ENST00000595689 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.98
SSX4-201ENST00000595689 HFM1A2PYH4 1435 aa8.9□□□□□ -0.98
SSX4-201ENST00000595689 SLC52A1Q9NWF4 448 aa8.9□□□□□ -0.98
SSX4-201ENST00000595689 EID1Q9Y6B2 187 aa8.89□□□□□ -0.99
SSX4-201ENST00000595689 CLTCL1P53675 1640 aa8.89□□□□□ -0.99
SSX4-201ENST00000595689 RIMS2Q9UQ26 1411 aa8.88□□□□□ -0.99
SSX4-201ENST00000595689 NWD1Q149M9 1564 aa8.88□□□□□ -0.99
SSX4-201ENST00000595689 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
SSX4-201ENST00000595689 TRPM2O94759 1503 aa8.87□□□□□ -0.99
SSX4-201ENST00000595689 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
SSX4-201ENST00000595689 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
SSX4-201ENST00000595689 CHD2O14647 1828 aaKnown RBP8.86□□□□□ -0.99
SSX4-201ENST00000595689 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
SSX4-201ENST00000595689 KIF1BO60333 1816 aa8.85□□□□□ -0.99
SSX4-201ENST00000595689 NRXN3Q9Y4C0 1643 aa8.85□□□□□ -0.99
SSX4-201ENST00000595689 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
SSX4-201ENST00000595689 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
SSX4-201ENST00000595689 ADAMTS13Q76LX8 1427 aa8.84□□□□□ -0.99
SSX4-201ENST00000595689 NEXMIFQ5QGS0 1516 aa8.84□□□□□ -0.99
SSX4-201ENST00000595689 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
SSX4-201ENST00000595689 PPP1R15AO75807 674 aaPredicted RBP8.83□□□□□ -1
SSX4-201ENST00000595689 PIP4K2BP78356 416 aa8.83□□□□□ -1
SSX4-201ENST00000595689 TRIM52Q96A61 297 aa8.83□□□□□ -1
SSX4-201ENST00000595689 TOM1O60784 492 aa8.82□□□□□ -1
SSX4-201ENST00000595689 KCNA6P17658 529 aa8.82□□□□□ -1
SSX4-201ENST00000595689 BCANQ96GW7 911 aa8.82□□□□□ -1
SSX4-201ENST00000595689 SETBP1Q9Y6X0 1596 aa8.82□□□□□ -1
SSX4-201ENST00000595689 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.81□□□□□ -1
SSX4-201ENST00000595689 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
SSX4-201ENST00000595689 TMEM94Q12767 1356 aa8.81□□□□□ -1
SSX4-201ENST00000595689 PPLO60437 1756 aa8.81□□□□□ -1
SSX4-201ENST00000595689 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
SSX4-201ENST00000595689 XRN1Q8IZH2 1706 aaKnown RBP8.8□□□□□ -1
SSX4-201ENST00000595689 HDGFP51858 240 aaKnown RBP8.8□□□□□ -1
SSX4-201ENST00000595689 SLC4A1APQ9BWU0 796 aaKnown RBP8.8□□□□□ -1
SSX4-201ENST00000595689 PTPRUQ92729 1446 aa8.8□□□□□ -1
SSX4-201ENST00000595689 HSPA1LP34931 641 aa8.79□□□□□ -1
SSX4-201ENST00000595689 TBX22Q9Y458 520 aa8.79□□□□□ -1
SSX4-201ENST00000595689 IFT172Q9UG01 1749 aa8.79□□□□□ -1
SSX4-201ENST00000595689 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
SSX4-201ENST00000595689 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
SSX4-201ENST00000595689 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
SSX4-201ENST00000595689 MED1Q15648 1581 aaPredicted RBP8.78□□□□□ -1
SSX4-201ENST00000595689 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1
SSX4-201ENST00000595689 PIK3R4Q99570 1358 aa8.77□□□□□ -1.01
SSX4-201ENST00000595689 SETD5Q9C0A6 1442 aa8.77□□□□□ -1.01
SSX4-201ENST00000595689 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
SSX4-201ENST00000595689 DISP3Q9P2K9 1392 aa8.76□□□□□ -1.01
SSX4-201ENST00000595689 MPHOSPH9Q99550 1183 aa8.76□□□□□ -1.01
SSX4-201ENST00000595689 METP08581 1390 aa8.75□□□□□ -1.01
SSX4-201ENST00000595689 MSH6P52701 1360 aa8.75□□□□□ -1.01
SSX4-201ENST00000595689 NALCNQ8IZF0 1738 aa8.75□□□□□ -1.01
SSX4-201ENST00000595689 CCDC144AA2RUR9 1427 aa8.74□□□□□ -1.01
SSX4-201ENST00000595689 FAM135BQ49AJ0 1406 aa8.74□□□□□ -1.01
SSX4-201ENST00000595689 SPATA31E1Q6ZUB1 1445 aa8.74□□□□□ -1.01
SSX4-201ENST00000595689 NCOA3Q9Y6Q9 1424 aa8.74□□□□□ -1.01
SSX4-201ENST00000595689 AMOTL2Q9Y2J4 779 aa8.73□□□□□ -1.01
SSX4-201ENST00000595689 PHLPP1O60346 1717 aa8.73□□□□□ -1.01
SSX4-201ENST00000595689 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
SSX4-201ENST00000595689 ASXL1Q8IXJ9 1541 aa8.71□□□□□ -1.01
SSX4-201ENST00000595689 CACNB1Q02641 598 aaPredicted RBP8.71□□□□□ -1.02
SSX4-201ENST00000595689 COL16A1Q07092 1604 aaPredicted RBP8.71□□□□□ -1.02
SSX4-201ENST00000595689 RPGRIP1LQ68CZ1 1315 aa8.71□□□□□ -1.02
SSX4-201ENST00000595689 VGFO15240 615 aaPredicted RBP8.7□□□□□ -1.02
SSX4-201ENST00000595689 C14orf37Q86TY3 774 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 RNF39Q9H2S5 420 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 ADGRF5Q8IZF2 1346 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 DCCP43146 1447 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 PTCH1Q13635 1447 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 PRAG1Q86YV5 1406 aa8.7□□□□□ -1.02
SSX4-201ENST00000595689 AHDC1Q5TGY3 1603 aaPredicted RBP8.69□□□□□ -1.02
SSX4-201ENST00000595689 KNDC1Q76NI1 1749 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 RGL3Q3MIN7 710 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 ROBO2Q9HCK4 1378 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 PIK3C2GO75747 1445 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 MST1RQ04912 1400 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 ADGRL3Q9HAR2 1447 aa8.69□□□□□ -1.02
SSX4-201ENST00000595689 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
SSX4-201ENST00000595689 C19orf44Q9H6X5 657 aa8.68□□□□□ -1.02
SSX4-201ENST00000595689 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
SSX4-201ENST00000595689 ANKRD30BQ9BXX2 1392 aa8.68□□□□□ -1.02
SSX4-201ENST00000595689 MYOM2P54296 1465 aa8.68□□□□□ -1.02
SSX4-201ENST00000595689 NHSL1Q5SYE7 1610 aa8.68□□□□□ -1.02
SSX4-201ENST00000595689 LAMC1P11047 1609 aa8.67□□□□□ -1.02
SSX4-201ENST00000595689 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
SSX4-201ENST00000595689 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
SSX4-201ENST00000595689 ATF3P18847 181 aa8.66□□□□□ -1.02
SSX4-201ENST00000595689 TECPR2O15040 1411 aa8.65□□□□□ -1.02
SSX4-201ENST00000595689 BRINP3Q76B58 766 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms