RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CERKQ8TCT0 537 aa22.76■■□□□ 1.23
USE1-206ENST00000595101 SLC26A8Q96RN1 970 aa22.76■■□□□ 1.23
USE1-206ENST00000595101 LTBP4Q8N2S1 1624 aa22.75■■□□□ 1.23
USE1-206ENST00000595101 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
USE1-206ENST00000595101 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
USE1-206ENST00000595101 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
USE1-206ENST00000595101 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
USE1-206ENST00000595101 BCANQ96GW7 911 aa22.72■■□□□ 1.23
USE1-206ENST00000595101 CCDC144AA2RUR9 1427 aa22.69■■□□□ 1.22
USE1-206ENST00000595101 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.69■■□□□ 1.22
USE1-206ENST00000595101 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
USE1-206ENST00000595101 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
USE1-206ENST00000595101 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
USE1-206ENST00000595101 ANKRD30BQ9BXX2 1392 aa22.66■■□□□ 1.22
USE1-206ENST00000595101 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.22
USE1-206ENST00000595101 NEXMIFQ5QGS0 1516 aa22.63■■□□□ 1.21
USE1-206ENST00000595101 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
USE1-206ENST00000595101 ADAMTS13Q76LX8 1427 aa22.63■■□□□ 1.21
USE1-206ENST00000595101 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
USE1-206ENST00000595101 KIF1BO60333 1816 aa22.62■■□□□ 1.21
USE1-206ENST00000595101 RBM33Q96EV2 1170 aaKnown RBP22.59■■□□□ 1.21
USE1-206ENST00000595101 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
USE1-206ENST00000595101 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
USE1-206ENST00000595101 KCNA6P17658 529 aa22.57■■□□□ 1.2
USE1-206ENST00000595101 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
USE1-206ENST00000595101 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
USE1-206ENST00000595101 CPS1P31327 1500 aa22.56■■□□□ 1.2
USE1-206ENST00000595101 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
USE1-206ENST00000595101 LRRC7Q96NW7 1537 aa22.55■■□□□ 1.2
USE1-206ENST00000595101 NRXN3Q9Y4C0 1643 aa22.54■■□□□ 1.2
USE1-206ENST00000595101 METP08581 1390 aa22.53■■□□□ 1.2
USE1-206ENST00000595101 PTPRUQ92729 1446 aa22.52■■□□□ 1.2
USE1-206ENST00000595101 SETBP1Q9Y6X0 1596 aa22.51■■□□□ 1.19
USE1-206ENST00000595101 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
USE1-206ENST00000595101 PPLO60437 1756 aa22.49■■□□□ 1.19
USE1-206ENST00000595101 PROSER2Q86WR7 435 aaPredicted RBP22.49■■□□□ 1.19
USE1-206ENST00000595101 AMOTL2Q9Y2J4 779 aa22.49■■□□□ 1.19
USE1-206ENST00000595101 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
USE1-206ENST00000595101 TMEM94Q12767 1356 aa22.48■■□□□ 1.19
USE1-206ENST00000595101 IQSEC2Q5JU85 1478 aa22.48■■□□□ 1.19
USE1-206ENST00000595101 UBAP1LF5GYI3 381 aa22.48■■□□□ 1.19
USE1-206ENST00000595101 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
USE1-206ENST00000595101 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
USE1-206ENST00000595101 NWD1Q149M9 1564 aa22.45■■□□□ 1.18
USE1-206ENST00000595101 KDM2AQ9Y2K7 1162 aa22.45■■□□□ 1.18
USE1-206ENST00000595101 CHD2O14647 1828 aaKnown RBP22.44■■□□□ 1.18
USE1-206ENST00000595101 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
USE1-206ENST00000595101 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
USE1-206ENST00000595101 ALKQ9UM73 1620 aa22.43■■□□□ 1.18
USE1-206ENST00000595101 IFT172Q9UG01 1749 aa22.42■■□□□ 1.18
USE1-206ENST00000595101 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
USE1-206ENST00000595101 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
USE1-206ENST00000595101 PIP4K2BP78356 416 aa22.4■■□□□ 1.18
USE1-206ENST00000595101 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
USE1-206ENST00000595101 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
USE1-206ENST00000595101 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
USE1-206ENST00000595101 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
USE1-206ENST00000595101 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
USE1-206ENST00000595101 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
USE1-206ENST00000595101 TOM1O60784 492 aa22.37■■□□□ 1.17
USE1-206ENST00000595101 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
USE1-206ENST00000595101 MYOM2P54296 1465 aa22.36■■□□□ 1.17
USE1-206ENST00000595101 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
USE1-206ENST00000595101 STK26Q9P289 416 aa22.35■■□□□ 1.17
USE1-206ENST00000595101 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
USE1-206ENST00000595101 ROBO2Q9HCK4 1378 aa22.34■■□□□ 1.17
USE1-206ENST00000595101 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
USE1-206ENST00000595101 C14orf37Q86TY3 774 aa22.33■■□□□ 1.17
USE1-206ENST00000595101 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
USE1-206ENST00000595101 MSH6P52701 1360 aa22.29■■□□□ 1.16
USE1-206ENST00000595101 C19orf44Q9H6X5 657 aa22.28■■□□□ 1.16
USE1-206ENST00000595101 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
USE1-206ENST00000595101 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
USE1-206ENST00000595101 LRPPRCP42704 1394 aaKnown RBP22.26■■□□□ 1.15
USE1-206ENST00000595101 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
USE1-206ENST00000595101 YTHDC2Q9H6S0 1430 aaKnown RBP22.25■■□□□ 1.15
USE1-206ENST00000595101 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
USE1-206ENST00000595101 STAC3Q96MF2 364 aa22.25■■□□□ 1.15
USE1-206ENST00000595101 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
USE1-206ENST00000595101 HSPA1LP34931 641 aa22.24■■□□□ 1.15
USE1-206ENST00000595101 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
USE1-206ENST00000595101 PRAG1Q86YV5 1406 aa22.22■■□□□ 1.15
USE1-206ENST00000595101 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
USE1-206ENST00000595101 ATF3P18847 181 aa22.21■■□□□ 1.15
USE1-206ENST00000595101 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
USE1-206ENST00000595101 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
USE1-206ENST00000595101 TECPR2O15040 1411 aa22.21■■□□□ 1.15
USE1-206ENST00000595101 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
USE1-206ENST00000595101 ADGRL3Q9HAR2 1447 aa22.2■■□□□ 1.14
USE1-206ENST00000595101 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
USE1-206ENST00000595101 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
USE1-206ENST00000595101 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
USE1-206ENST00000595101 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
USE1-206ENST00000595101 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
USE1-206ENST00000595101 LAMC1P11047 1609 aa22.16■■□□□ 1.14
USE1-206ENST00000595101 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
USE1-206ENST00000595101 DCCP43146 1447 aa22.13■■□□□ 1.13
USE1-206ENST00000595101 MST1RQ04912 1400 aa22.13■■□□□ 1.13
USE1-206ENST00000595101 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
USE1-206ENST00000595101 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms