RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
GTF2F1-203ENST00000594213 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
GTF2F1-203ENST00000594213 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
GTF2F1-203ENST00000594213 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
GTF2F1-203ENST00000594213 HDGFP51858 240 aaKnown RBP24.51■■□□□ 1.51
GTF2F1-203ENST00000594213 RGS17Q9UGC6 210 aaPredicted RBP24.51■■□□□ 1.51
GTF2F1-203ENST00000594213 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
GTF2F1-203ENST00000594213 BCANQ96GW7 911 aa24.5■■□□□ 1.51
GTF2F1-203ENST00000594213 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
GTF2F1-203ENST00000594213 UNC13BO14795 1591 aa24.49■■□□□ 1.51
GTF2F1-203ENST00000594213 TMEM131LA2VDJ0 1609 aa24.47■■□□□ 1.51
GTF2F1-203ENST00000594213 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
GTF2F1-203ENST00000594213 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.5
GTF2F1-203ENST00000594213 SLAIN2Q9P270 581 aa24.44■■□□□ 1.5
GTF2F1-203ENST00000594213 NUP155O75694 1391 aa24.43■■□□□ 1.5
GTF2F1-203ENST00000594213 MSH6P52701 1360 aa24.43■■□□□ 1.5
GTF2F1-203ENST00000594213 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
GTF2F1-203ENST00000594213 ADAMTS13Q76LX8 1427 aa24.43■■□□□ 1.5
GTF2F1-203ENST00000594213 GCC2Q8IWJ2 1684 aa24.42■■□□□ 1.5
GTF2F1-203ENST00000594213 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
GTF2F1-203ENST00000594213 E9PCH4 1651 aa24.4■■□□□ 1.5
GTF2F1-203ENST00000594213 IQGAP3Q86VI3 1631 aa24.39■■□□□ 1.5
GTF2F1-203ENST00000594213 NUTM2DQ5VT03 806 aaPredicted RBP24.39■■□□□ 1.49
GTF2F1-203ENST00000594213 ITGAEP38570 1179 aa24.38■■□□□ 1.49
GTF2F1-203ENST00000594213 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
GTF2F1-203ENST00000594213 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
GTF2F1-203ENST00000594213 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
GTF2F1-203ENST00000594213 CHD2O14647 1828 aaKnown RBP24.36■■□□□ 1.49
GTF2F1-203ENST00000594213 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
GTF2F1-203ENST00000594213 POTEAQ6S8J7 498 aa24.33■■□□□ 1.49
GTF2F1-203ENST00000594213 C19orf44Q9H6X5 657 aa24.31■■□□□ 1.48
GTF2F1-203ENST00000594213 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
GTF2F1-203ENST00000594213 PTPRUQ92729 1446 aa24.3■■□□□ 1.48
GTF2F1-203ENST00000594213 AMOTL2Q9Y2J4 779 aa24.3■■□□□ 1.48
GTF2F1-203ENST00000594213 JCADQ9P266 1359 aa24.29■■□□□ 1.48
GTF2F1-203ENST00000594213 CADPS2Q86UW7 1296 aa24.28■■□□□ 1.48
GTF2F1-203ENST00000594213 C14orf37Q86TY3 774 aa24.26■■□□□ 1.47
GTF2F1-203ENST00000594213 ATF3P18847 181 aa24.23■■□□□ 1.47
GTF2F1-203ENST00000594213 RRBP1Q9P2E9 1410 aaKnown RBP24.23■■□□□ 1.47
GTF2F1-203ENST00000594213 TRPM2O94759 1503 aa24.23■■□□□ 1.47
GTF2F1-203ENST00000594213 PHLPP1O60346 1717 aa24.2■■□□□ 1.46
GTF2F1-203ENST00000594213 COL16A1Q07092 1604 aaPredicted RBP24.2■■□□□ 1.46
GTF2F1-203ENST00000594213 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.46
GTF2F1-203ENST00000594213 NAIPQ13075 1403 aa24.19■■□□□ 1.46
GTF2F1-203ENST00000594213 METP08581 1390 aa24.19■■□□□ 1.46
GTF2F1-203ENST00000594213 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
GTF2F1-203ENST00000594213 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
GTF2F1-203ENST00000594213 ZNF326Q5BKZ1 582 aaKnown RBP24.18■■□□□ 1.46
GTF2F1-203ENST00000594213 BRINP3Q76B58 766 aa24.18■■□□□ 1.46
GTF2F1-203ENST00000594213 SPATA31A6Q5VVP1 1343 aa24.17■■□□□ 1.46
GTF2F1-203ENST00000594213 DCCP43146 1447 aa24.17■■□□□ 1.46
GTF2F1-203ENST00000594213 AHDC1Q5TGY3 1603 aaPredicted RBP24.16■■□□□ 1.46
GTF2F1-203ENST00000594213 SPHKAPQ2M3C7 1700 aa24.14■■□□□ 1.45
GTF2F1-203ENST00000594213 LRP6O75581 1613 aa24.13■■□□□ 1.45
GTF2F1-203ENST00000594213 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
GTF2F1-203ENST00000594213 MST1RQ04912 1400 aa24.1■■□□□ 1.45
GTF2F1-203ENST00000594213 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
GTF2F1-203ENST00000594213 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
GTF2F1-203ENST00000594213 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
GTF2F1-203ENST00000594213 SETD5Q9C0A6 1442 aa24.06■■□□□ 1.44
GTF2F1-203ENST00000594213 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
GTF2F1-203ENST00000594213 ASXL1Q8IXJ9 1541 aa24.05■■□□□ 1.44
GTF2F1-203ENST00000594213 VGFO15240 615 aaPredicted RBP24.04■■□□□ 1.44
GTF2F1-203ENST00000594213 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
GTF2F1-203ENST00000594213 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
GTF2F1-203ENST00000594213 MEX3CQ5U5Q3 659 aaKnown RBP24.03■■□□□ 1.44
GTF2F1-203ENST00000594213 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
GTF2F1-203ENST00000594213 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
GTF2F1-203ENST00000594213 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
GTF2F1-203ENST00000594213 LRRC59Q96AG4 307 aaKnown RBP24■■□□□ 1.43
GTF2F1-203ENST00000594213 DDX17Q92841 729 aaKnown RBP23.99■■□□□ 1.43
GTF2F1-203ENST00000594213 ROBO2Q9HCK4 1378 aa23.99■■□□□ 1.43
GTF2F1-203ENST00000594213 PTCH1Q13635 1447 aa23.99■■□□□ 1.43
GTF2F1-203ENST00000594213 PRAG1Q86YV5 1406 aa23.99■■□□□ 1.43
GTF2F1-203ENST00000594213 NUTM2BA6NNL0 878 aaPredicted RBP23.98■■□□□ 1.43
GTF2F1-203ENST00000594213 NUTM2EB1AL46 878 aaPredicted RBP23.98■■□□□ 1.43
GTF2F1-203ENST00000594213 NUTM2AQ8IVF1 878 aaPredicted RBP23.98■■□□□ 1.43
GTF2F1-203ENST00000594213 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
GTF2F1-203ENST00000594213 PNPLA6Q8IY17 1366 aa23.94■■□□□ 1.42
GTF2F1-203ENST00000594213 NHSL1Q5SYE7 1610 aa23.94■■□□□ 1.42
GTF2F1-203ENST00000594213 KIF1BO60333 1816 aa23.93■■□□□ 1.42
GTF2F1-203ENST00000594213 AFF2P51816 1311 aa23.92■■□□□ 1.42
GTF2F1-203ENST00000594213 RXRBP28702 533 aa23.92■■□□□ 1.42
GTF2F1-203ENST00000594213 FOXD1Q16676 465 aa23.92■■□□□ 1.42
GTF2F1-203ENST00000594213 SETD1AO15047 1707 aaKnown RBP23.91■■□□□ 1.42
GTF2F1-203ENST00000594213 NALCNQ8IZF0 1738 aa23.91■■□□□ 1.42
GTF2F1-203ENST00000594213 ORAI2Q96SN7 254 aa23.91■■□□□ 1.42
GTF2F1-203ENST00000594213 SOS2Q07890 1332 aaPredicted RBP23.9■■□□□ 1.42
GTF2F1-203ENST00000594213 UPF1Q92900 1129 aaKnown RBP eCLIP23.9■■□□□ 1.42
GTF2F1-203ENST00000594213 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
GTF2F1-203ENST00000594213 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
GTF2F1-203ENST00000594213 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
GTF2F1-203ENST00000594213 LAMC1P11047 1609 aa23.84■■□□□ 1.41
GTF2F1-203ENST00000594213 C8orf37Q96NL8 207 aa23.84■■□□□ 1.41
GTF2F1-203ENST00000594213 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
GTF2F1-203ENST00000594213 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
GTF2F1-203ENST00000594213 CCDC144AA2RUR9 1427 aa23.82■■□□□ 1.4
GTF2F1-203ENST00000594213 PPLO60437 1756 aa23.81■■□□□ 1.4
GTF2F1-203ENST00000594213 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
GTF2F1-203ENST00000594213 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms