RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
LDLRAD4-216ENST00000592657 ERICH3Q5RHP9 1530 aa10.48□□□□□ -0.73
LDLRAD4-216ENST00000592657 CHD1O14646 1710 aa10.48□□□□□ -0.73
LDLRAD4-216ENST00000592657 PPP4CP60510 307 aa10.48□□□□□ -0.73
LDLRAD4-216ENST00000592657 KIF27Q86VH2 1401 aa10.47□□□□□ -0.73
LDLRAD4-216ENST00000592657 MAP3K7O43318 606 aa10.46□□□□□ -0.73
LDLRAD4-216ENST00000592657 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.74
LDLRAD4-216ENST00000592657 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
LDLRAD4-216ENST00000592657 NBR1Q14596 966 aa10.44□□□□□ -0.74
LDLRAD4-216ENST00000592657 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
LDLRAD4-216ENST00000592657 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
LDLRAD4-216ENST00000592657 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
LDLRAD4-216ENST00000592657 PRXQ9BXM0 1461 aa10.41□□□□□ -0.74
LDLRAD4-216ENST00000592657 GFRA3O60609 400 aa10.4□□□□□ -0.74
LDLRAD4-216ENST00000592657 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
LDLRAD4-216ENST00000592657 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
LDLRAD4-216ENST00000592657 EN1Q05925 392 aaPredicted RBP10.38□□□□□ -0.75
LDLRAD4-216ENST00000592657 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
LDLRAD4-216ENST00000592657 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
LDLRAD4-216ENST00000592657 AQRO60306 1485 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDLRAD4-216ENST00000592657 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
LDLRAD4-216ENST00000592657 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
LDLRAD4-216ENST00000592657 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
LDLRAD4-216ENST00000592657 BCANQ96GW7 911 aa10.37□□□□□ -0.75
LDLRAD4-216ENST00000592657 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
LDLRAD4-216ENST00000592657 SMAPO00193 183 aa10.36□□□□□ -0.75
LDLRAD4-216ENST00000592657 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
LDLRAD4-216ENST00000592657 CDCA7LQ96GN5 454 aa10.36□□□□□ -0.75
LDLRAD4-216ENST00000592657 RNF40O75150 1001 aa10.35□□□□□ -0.75
LDLRAD4-216ENST00000592657 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
LDLRAD4-216ENST00000592657 CERKQ8TCT0 537 aa10.35□□□□□ -0.75
LDLRAD4-216ENST00000592657 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
LDLRAD4-216ENST00000592657 GRXCR2A6NFK2 248 aa10.34□□□□□ -0.75
LDLRAD4-216ENST00000592657 PRSS12P56730 875 aa10.34□□□□□ -0.75
LDLRAD4-216ENST00000592657 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
LDLRAD4-216ENST00000592657 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
LDLRAD4-216ENST00000592657 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
LDLRAD4-216ENST00000592657 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
LDLRAD4-216ENST00000592657 PNMA3Q9UL41 463 aa10.33□□□□□ -0.76
LDLRAD4-216ENST00000592657 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
LDLRAD4-216ENST00000592657 IGF1RP08069 1367 aa10.32□□□□□ -0.76
LDLRAD4-216ENST00000592657 PDIA6Q15084 440 aa10.32□□□□□ -0.76
LDLRAD4-216ENST00000592657 IL21Q9HBE4 155 aa10.32□□□□□ -0.76
LDLRAD4-216ENST00000592657 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
LDLRAD4-216ENST00000592657 TATDN2Q93075 761 aa10.31□□□□□ -0.76
LDLRAD4-216ENST00000592657 FHAD1B1AJZ9 1412 aa10.31□□□□□ -0.76
LDLRAD4-216ENST00000592657 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
LDLRAD4-216ENST00000592657 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
LDLRAD4-216ENST00000592657 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
LDLRAD4-216ENST00000592657 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
LDLRAD4-216ENST00000592657 E2F4Q16254 413 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 MTRQ99707 1265 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 IQGAP2Q13576 1575 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 SAMD9Q5K651 1589 aa10.29□□□□□ -0.76
LDLRAD4-216ENST00000592657 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
LDLRAD4-216ENST00000592657 CARMIL1Q5VZK9 1371 aa10.27□□□□□ -0.76
LDLRAD4-216ENST00000592657 SHROOM2Q13796 1616 aa10.27□□□□□ -0.77
LDLRAD4-216ENST00000592657 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
LDLRAD4-216ENST00000592657 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
LDLRAD4-216ENST00000592657 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.26□□□□□ -0.77
LDLRAD4-216ENST00000592657 GGCXP38435 758 aa10.25□□□□□ -0.77
LDLRAD4-216ENST00000592657 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
LDLRAD4-216ENST00000592657 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
LDLRAD4-216ENST00000592657 EFCAB5A4FU69 1503 aa10.24□□□□□ -0.77
LDLRAD4-216ENST00000592657 CLASP1Q7Z460 1538 aa10.24□□□□□ -0.77
LDLRAD4-216ENST00000592657 NRG2O14511 850 aaPredicted RBP10.24□□□□□ -0.77
LDLRAD4-216ENST00000592657 ZNF516Q92618 1163 aa10.24□□□□□ -0.77
LDLRAD4-216ENST00000592657 NUP160Q12769 1436 aa10.24□□□□□ -0.77
LDLRAD4-216ENST00000592657 FAM198AQ9UFP1 575 aa10.23□□□□□ -0.77
LDLRAD4-216ENST00000592657 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
LDLRAD4-216ENST00000592657 LRRIQ1Q96JM4 1722 aa10.22□□□□□ -0.77
LDLRAD4-216ENST00000592657 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
LDLRAD4-216ENST00000592657 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
LDLRAD4-216ENST00000592657 UGGT2Q9NYU1 1516 aa10.2□□□□□ -0.78
LDLRAD4-216ENST00000592657 PDZRN3Q9UPQ7 1066 aa10.2□□□□□ -0.78
LDLRAD4-216ENST00000592657 CFAP43Q8NDM7 1665 aa10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 APLP1P51693 650 aa10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 COPS2P61201 443 aa10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
LDLRAD4-216ENST00000592657 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
LDLRAD4-216ENST00000592657 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 LOC105371045A0A1W2PR82 267 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 C3orf80F5H4A9 247 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 OSBPP22059 807 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 ZNF787Q6DD87 383 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 PCF11O94913 1555 aaKnown RBP10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
LDLRAD4-216ENST00000592657 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
LDLRAD4-216ENST00000592657 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
LDLRAD4-216ENST00000592657 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
LDLRAD4-216ENST00000592657 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
LDLRAD4-216ENST00000592657 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
LDLRAD4-216ENST00000592657 CLIP1P30622 1438 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms