RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
ERCC1-213ENST00000592023 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
ERCC1-213ENST00000592023 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
ERCC1-213ENST00000592023 BCANQ96GW7 911 aa22.84■■□□□ 1.25
ERCC1-213ENST00000592023 SLC26A8Q96RN1 970 aa22.84■■□□□ 1.25
ERCC1-213ENST00000592023 PLEKHG1Q9ULL1 1385 aa22.84■■□□□ 1.25
ERCC1-213ENST00000592023 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
ERCC1-213ENST00000592023 XIRP1Q702N8 1843 aaKnown RBP22.81■■□□□ 1.24
ERCC1-213ENST00000592023 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
ERCC1-213ENST00000592023 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
ERCC1-213ENST00000592023 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
ERCC1-213ENST00000592023 HDGFP51858 240 aaKnown RBP22.79■■□□□ 1.24
ERCC1-213ENST00000592023 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.79■■□□□ 1.24
ERCC1-213ENST00000592023 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
ERCC1-213ENST00000592023 KIF1BO60333 1816 aa22.78■■□□□ 1.24
ERCC1-213ENST00000592023 TOM1O60784 492 aa22.77■■□□□ 1.24
ERCC1-213ENST00000592023 PIP4K2BP78356 416 aa22.77■■□□□ 1.24
ERCC1-213ENST00000592023 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
ERCC1-213ENST00000592023 NKTRP30414 1462 aaKnown RBP22.76■■□□□ 1.23
ERCC1-213ENST00000592023 KCNA6P17658 529 aa22.74■■□□□ 1.23
ERCC1-213ENST00000592023 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
ERCC1-213ENST00000592023 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
ERCC1-213ENST00000592023 ZNF326Q5BKZ1 582 aaKnown RBP22.73■■□□□ 1.23
ERCC1-213ENST00000592023 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
ERCC1-213ENST00000592023 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
ERCC1-213ENST00000592023 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
ERCC1-213ENST00000592023 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
ERCC1-213ENST00000592023 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
ERCC1-213ENST00000592023 FOXD1Q16676 465 aa22.69■■□□□ 1.22
ERCC1-213ENST00000592023 PROSER2Q86WR7 435 aaPredicted RBP22.68■■□□□ 1.22
ERCC1-213ENST00000592023 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
ERCC1-213ENST00000592023 TBX22Q9Y458 520 aa22.68■■□□□ 1.22
ERCC1-213ENST00000592023 HSPA1LP34931 641 aa22.64■■□□□ 1.21
ERCC1-213ENST00000592023 MPHOSPH9Q99550 1183 aa22.64■■□□□ 1.21
ERCC1-213ENST00000592023 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
ERCC1-213ENST00000592023 CCDC144AA2RUR9 1427 aa22.63■■□□□ 1.21
ERCC1-213ENST00000592023 PIK3R4Q99570 1358 aa22.63■■□□□ 1.21
ERCC1-213ENST00000592023 PPLO60437 1756 aa22.61■■□□□ 1.21
ERCC1-213ENST00000592023 XRN1Q8IZH2 1706 aaKnown RBP22.61■■□□□ 1.21
ERCC1-213ENST00000592023 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
ERCC1-213ENST00000592023 MSH6P52701 1360 aa22.6■■□□□ 1.21
ERCC1-213ENST00000592023 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
ERCC1-213ENST00000592023 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
ERCC1-213ENST00000592023 SETD1AO15047 1707 aaKnown RBP22.56■■□□□ 1.2
ERCC1-213ENST00000592023 ROBO1Q9Y6N7 1651 aa22.55■■□□□ 1.2
ERCC1-213ENST00000592023 METP08581 1390 aa22.55■■□□□ 1.2
ERCC1-213ENST00000592023 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
ERCC1-213ENST00000592023 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
ERCC1-213ENST00000592023 C14orf37Q86TY3 774 aa22.53■■□□□ 1.2
ERCC1-213ENST00000592023 SPATA31E1Q6ZUB1 1445 aa22.53■■□□□ 1.2
ERCC1-213ENST00000592023 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
ERCC1-213ENST00000592023 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.52■■□□□ 1.2
ERCC1-213ENST00000592023 NCOA3Q9Y6Q9 1424 aa22.52■■□□□ 1.2
ERCC1-213ENST00000592023 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
ERCC1-213ENST00000592023 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
ERCC1-213ENST00000592023 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
ERCC1-213ENST00000592023 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
ERCC1-213ENST00000592023 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.19
ERCC1-213ENST00000592023 ADGRF5Q8IZF2 1346 aa22.44■■□□□ 1.18
ERCC1-213ENST00000592023 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
ERCC1-213ENST00000592023 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
ERCC1-213ENST00000592023 C19orf44Q9H6X5 657 aa22.43■■□□□ 1.18
ERCC1-213ENST00000592023 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
ERCC1-213ENST00000592023 DCCP43146 1447 aa22.42■■□□□ 1.18
ERCC1-213ENST00000592023 ATF3P18847 181 aa22.42■■□□□ 1.18
ERCC1-213ENST00000592023 PHLPP1O60346 1717 aa22.42■■□□□ 1.18
ERCC1-213ENST00000592023 ADGRL3Q9HAR2 1447 aa22.41■■□□□ 1.18
ERCC1-213ENST00000592023 CADPS2Q86UW7 1296 aa22.41■■□□□ 1.18
ERCC1-213ENST00000592023 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
ERCC1-213ENST00000592023 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
ERCC1-213ENST00000592023 ASXL1Q8IXJ9 1541 aa22.39■■□□□ 1.17
ERCC1-213ENST00000592023 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
ERCC1-213ENST00000592023 MYOM2P54296 1465 aa22.37■■□□□ 1.17
ERCC1-213ENST00000592023 HRCP23327 699 aa22.37■■□□□ 1.17
ERCC1-213ENST00000592023 COL16A1Q07092 1604 aaPredicted RBP22.36■■□□□ 1.17
ERCC1-213ENST00000592023 MST1RQ04912 1400 aa22.35■■□□□ 1.17
ERCC1-213ENST00000592023 ILDR2Q71H61 639 aa22.35■■□□□ 1.17
ERCC1-213ENST00000592023 LAMC1P11047 1609 aa22.35■■□□□ 1.17
ERCC1-213ENST00000592023 AHDC1Q5TGY3 1603 aaPredicted RBP22.34■■□□□ 1.17
ERCC1-213ENST00000592023 KNDC1Q76NI1 1749 aa22.34■■□□□ 1.17
ERCC1-213ENST00000592023 NRXN1Q9ULB1 1477 aa22.34■■□□□ 1.17
ERCC1-213ENST00000592023 LRPPRCP42704 1394 aaKnown RBP22.29■■□□□ 1.16
ERCC1-213ENST00000592023 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
ERCC1-213ENST00000592023 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
ERCC1-213ENST00000592023 STK26Q9P289 416 aa22.29■■□□□ 1.16
ERCC1-213ENST00000592023 TECPR2O15040 1411 aa22.29■■□□□ 1.16
ERCC1-213ENST00000592023 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
ERCC1-213ENST00000592023 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
ERCC1-213ENST00000592023 CDC42BPGQ6DT37 1551 aa22.27■■□□□ 1.16
ERCC1-213ENST00000592023 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
ERCC1-213ENST00000592023 JCADQ9P266 1359 aa22.25■■□□□ 1.15
ERCC1-213ENST00000592023 C1orf167Q5SNV9 1468 aa22.24■■□□□ 1.15
ERCC1-213ENST00000592023 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
ERCC1-213ENST00000592023 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
ERCC1-213ENST00000592023 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
ERCC1-213ENST00000592023 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
ERCC1-213ENST00000592023 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
ERCC1-213ENST00000592023 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
ERCC1-213ENST00000592023 DCAF11Q8TEB1 546 aa22.2■■□□□ 1.14
ERCC1-213ENST00000592023 KDM2AQ9Y2K7 1162 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms