RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 TRPM2O94759 1503 aa30.55■■■□□ 2.48
ERCC2-212ENST00000591309 RIMS2Q9UQ26 1411 aa30.55■■■□□ 2.48
ERCC2-212ENST00000591309 MYO5BQ9ULV0 1848 aa30.51■■■□□ 2.47
ERCC2-212ENST00000591309 CLTCL1P53675 1640 aa30.47■■■□□ 2.47
ERCC2-212ENST00000591309 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
ERCC2-212ENST00000591309 NUTM2DQ5VT03 806 aaPredicted RBP30.46■■■□□ 2.47
ERCC2-212ENST00000591309 LTBP4Q8N2S1 1624 aa30.45■■■□□ 2.47
ERCC2-212ENST00000591309 SENP3Q9H4L4 574 aaPredicted RBP30.45■■■□□ 2.47
ERCC2-212ENST00000591309 CCDC144AA2RUR9 1427 aa30.45■■■□□ 2.46
ERCC2-212ENST00000591309 KIF1BO60333 1816 aa30.44■■■□□ 2.46
ERCC2-212ENST00000591309 PLEKHG1Q9ULL1 1385 aa30.42■■■□□ 2.46
ERCC2-212ENST00000591309 SLC26A8Q96RN1 970 aa30.42■■■□□ 2.46
ERCC2-212ENST00000591309 FBXO41Q8TF61 875 aa30.41■■■□□ 2.46
ERCC2-212ENST00000591309 TRIM26Q12899 539 aaPredicted RBP30.4■■■□□ 2.46
ERCC2-212ENST00000591309 CPS1P31327 1500 aa30.38■■■□□ 2.45
ERCC2-212ENST00000591309 RPGRIP1LQ68CZ1 1315 aa30.34■■■□□ 2.45
ERCC2-212ENST00000591309 ILDR1Q86SU0 546 aaPredicted RBP30.34■■■□□ 2.45
ERCC2-212ENST00000591309 IQSEC2Q5JU85 1478 aa30.33■■■□□ 2.45
ERCC2-212ENST00000591309 VGFO15240 615 aaPredicted RBP30.32■■■□□ 2.44
ERCC2-212ENST00000591309 RGL3Q3MIN7 710 aa30.31■■■□□ 2.44
ERCC2-212ENST00000591309 TBX22Q9Y458 520 aa30.31■■■□□ 2.44
ERCC2-212ENST00000591309 KCNA6P17658 529 aa30.29■■■□□ 2.44
ERCC2-212ENST00000591309 NEXMIFQ5QGS0 1516 aa30.27■■■□□ 2.44
ERCC2-212ENST00000591309 ANKRD30BQ9BXX2 1392 aa30.23■■■□□ 2.43
ERCC2-212ENST00000591309 DIP2AQ14689 1571 aa30.23■■■□□ 2.43
ERCC2-212ENST00000591309 ADAMTS13Q76LX8 1427 aa30.22■■■□□ 2.43
ERCC2-212ENST00000591309 UBAP1LF5GYI3 381 aa30.22■■■□□ 2.43
ERCC2-212ENST00000591309 PROSER2Q86WR7 435 aaPredicted RBP30.21■■■□□ 2.43
ERCC2-212ENST00000591309 STRCP1A6NGW2 1772 aa30.2■■■□□ 2.42
ERCC2-212ENST00000591309 SPATA31E1Q6ZUB1 1445 aa30.2■■■□□ 2.42
ERCC2-212ENST00000591309 PIK3R4Q99570 1358 aa30.19■■■□□ 2.42
ERCC2-212ENST00000591309 LRRC7Q96NW7 1537 aa30.19■■■□□ 2.42
ERCC2-212ENST00000591309 SETBP1Q9Y6X0 1596 aa30.17■■■□□ 2.42
ERCC2-212ENST00000591309 TOM1O60784 492 aa30.17■■■□□ 2.42
ERCC2-212ENST00000591309 NKTRP30414 1462 aaKnown RBP30.14■■■□□ 2.42
ERCC2-212ENST00000591309 PPLO60437 1756 aa30.14■■■□□ 2.42
ERCC2-212ENST00000591309 NWD1Q149M9 1564 aa30.12■■■□□ 2.41
ERCC2-212ENST00000591309 AMOTL2Q9Y2J4 779 aa30.12■■■□□ 2.41
ERCC2-212ENST00000591309 CHD2O14647 1828 aaKnown RBP30.11■■■□□ 2.41
ERCC2-212ENST00000591309 TMEM94Q12767 1356 aa30.11■■■□□ 2.41
ERCC2-212ENST00000591309 SCAF1Q9H7N4 1312 aaKnown RBP30.1■■■□□ 2.41
ERCC2-212ENST00000591309 ADGRF5Q8IZF2 1346 aa30.09■■■□□ 2.41
ERCC2-212ENST00000591309 NRXN3Q9Y4C0 1643 aa30.09■■■□□ 2.41
ERCC2-212ENST00000591309 C14orf37Q86TY3 774 aa30.08■■■□□ 2.41
ERCC2-212ENST00000591309 RBM33Q96EV2 1170 aaKnown RBP30.07■■■□□ 2.4
ERCC2-212ENST00000591309 METP08581 1390 aa30.06■■■□□ 2.4
ERCC2-212ENST00000591309 PIP4K2BP78356 416 aa30.05■■■□□ 2.4
ERCC2-212ENST00000591309 PTPRUQ92729 1446 aa30.03■■■□□ 2.4
ERCC2-212ENST00000591309 DCAF11Q8TEB1 546 aa30.02■■■□□ 2.4
ERCC2-212ENST00000591309 ALKQ9UM73 1620 aa30.02■■■□□ 2.4
ERCC2-212ENST00000591309 IFT172Q9UG01 1749 aa30.02■■■□□ 2.4
ERCC2-212ENST00000591309 MSH6P52701 1360 aa30.02■■■□□ 2.4
ERCC2-212ENST00000591309 KDM2AQ9Y2K7 1162 aa30.01■■■□□ 2.39
ERCC2-212ENST00000591309 STAC3Q96MF2 364 aa30■■■□□ 2.39
ERCC2-212ENST00000591309 MYOM2P54296 1465 aa29.98■■■□□ 2.39
ERCC2-212ENST00000591309 NCOA3Q9Y6Q9 1424 aa29.97■■■□□ 2.39
ERCC2-212ENST00000591309 XIRP1Q702N8 1843 aaKnown RBP29.96■■■□□ 2.39
ERCC2-212ENST00000591309 PIK3C2GO75747 1445 aa29.96■■■□□ 2.39
ERCC2-212ENST00000591309 DHX57Q6P158 1386 aaKnown RBP29.95■■■□□ 2.39
ERCC2-212ENST00000591309 PCGF6Q9BYE7 350 aa29.93■■■□□ 2.38
ERCC2-212ENST00000591309 XRN1Q8IZH2 1706 aaKnown RBP29.93■■■□□ 2.38
ERCC2-212ENST00000591309 ATF3P18847 181 aa29.91■■■□□ 2.38
ERCC2-212ENST00000591309 C19orf44Q9H6X5 657 aa29.91■■■□□ 2.38
ERCC2-212ENST00000591309 C14orf93Q9H972 538 aaKnown RBP29.91■■■□□ 2.38
ERCC2-212ENST00000591309 NEUROD1Q13562 356 aa29.9■■■□□ 2.38
ERCC2-212ENST00000591309 STK26Q9P289 416 aa29.9■■■□□ 2.38
ERCC2-212ENST00000591309 SETD1AO15047 1707 aaKnown RBP29.9■■■□□ 2.38
ERCC2-212ENST00000591309 NRXN1Q9ULB1 1477 aa29.89■■■□□ 2.38
ERCC2-212ENST00000591309 CFAP70Q5T0N1 1121 aa29.89■■■□□ 2.38
ERCC2-212ENST00000591309 TMEM132EQ6IEE7 984 aa29.89■■■□□ 2.38
ERCC2-212ENST00000591309 CADPS2Q86UW7 1296 aa29.88■■■□□ 2.37
ERCC2-212ENST00000591309 SIN3AQ96ST3 1273 aa29.88■■■□□ 2.37
ERCC2-212ENST00000591309 PTCH1Q13635 1447 aa29.85■■■□□ 2.37
ERCC2-212ENST00000591309 LRPPRCP42704 1394 aaKnown RBP29.84■■■□□ 2.37
ERCC2-212ENST00000591309 LAMC1P11047 1609 aa29.84■■■□□ 2.37
ERCC2-212ENST00000591309 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
ERCC2-212ENST00000591309 ROBO2Q9HCK4 1378 aa29.82■■■□□ 2.36
ERCC2-212ENST00000591309 YTHDC2Q9H6S0 1430 aaKnown RBP29.8■■■□□ 2.36
ERCC2-212ENST00000591309 ABCC11Q96J66 1382 aa29.79■■■□□ 2.36
ERCC2-212ENST00000591309 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
ERCC2-212ENST00000591309 HSPA1LP34931 641 aa29.78■■■□□ 2.36
ERCC2-212ENST00000591309 ADGRL3Q9HAR2 1447 aa29.78■■■□□ 2.36
ERCC2-212ENST00000591309 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.77■■■□□ 2.36
ERCC2-212ENST00000591309 DCCP43146 1447 aa29.77■■■□□ 2.36
ERCC2-212ENST00000591309 FAM135BQ49AJ0 1406 aa29.77■■■□□ 2.36
ERCC2-212ENST00000591309 L3MBTL2Q969R5 705 aa29.76■■■□□ 2.35
ERCC2-212ENST00000591309 ASXL1Q8IXJ9 1541 aa29.76■■■□□ 2.35
ERCC2-212ENST00000591309 TECPR2O15040 1411 aa29.75■■■□□ 2.35
ERCC2-212ENST00000591309 WAPLQ7Z5K2 1190 aa29.73■■■□□ 2.35
ERCC2-212ENST00000591309 SIRT1Q96EB6 747 aa29.72■■■□□ 2.35
ERCC2-212ENST00000591309 POGKQ9P215 609 aa29.71■■■□□ 2.35
ERCC2-212ENST00000591309 KNDC1Q76NI1 1749 aa29.7■■■□□ 2.34
ERCC2-212ENST00000591309 TRAK1Q9UPV9 953 aa29.69■■■□□ 2.34
ERCC2-212ENST00000591309 TONSLQ96HA7 1378 aa29.68■■■□□ 2.34
ERCC2-212ENST00000591309 ROBO1Q9Y6N7 1651 aa29.67■■■□□ 2.34
ERCC2-212ENST00000591309 NALCNQ8IZF0 1738 aa29.67■■■□□ 2.34
ERCC2-212ENST00000591309 PRAM1Q96QH2 718 aa29.66■■■□□ 2.34
ERCC2-212ENST00000591309 PLEKHH1Q9ULM0 1364 aa29.64■■■□□ 2.34
ERCC2-212ENST00000591309 SAFB2Q14151 953 aaKnown RBP eCLIP29.64■■■□□ 2.34
ERCC2-212ENST00000591309 ADGRB1O14514 1584 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms