RNA–Protein interactions for RNA: ENST00000590764.1

BECN1-215, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-215ENST00000590764 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
BECN1-215ENST00000590764 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
BECN1-215ENST00000590764 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
BECN1-215ENST00000590764 EYA1Q99502 592 aa13.16□□□□□ -0.3
BECN1-215ENST00000590764 RIMBP3CA6NJZ7 1639 aa13.14□□□□□ -0.31
BECN1-215ENST00000590764 RIMBP3BA6NNM3 1639 aa13.14□□□□□ -0.31
BECN1-215ENST00000590764 RIMBP3Q9UFD9 1639 aa13.14□□□□□ -0.31
BECN1-215ENST00000590764 FCHSD2O94868 740 aa13.14□□□□□ -0.31
BECN1-215ENST00000590764 PPP4CP60510 307 aa13.14□□□□□ -0.31
BECN1-215ENST00000590764 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
BECN1-215ENST00000590764 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
BECN1-215ENST00000590764 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
BECN1-215ENST00000590764 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
BECN1-215ENST00000590764 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
BECN1-215ENST00000590764 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
BECN1-215ENST00000590764 A0A0G2JS52 829 aa13.08□□□□□ -0.32
BECN1-215ENST00000590764 WDR62O43379 1518 aa13.08□□□□□ -0.32
BECN1-215ENST00000590764 HIC1Q14526 733 aa13.07□□□□□ -0.32
BECN1-215ENST00000590764 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
BECN1-215ENST00000590764 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
BECN1-215ENST00000590764 KCNC4Q03721 635 aa13.05□□□□□ -0.32
BECN1-215ENST00000590764 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
BECN1-215ENST00000590764 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
BECN1-215ENST00000590764 GPR37O15354 613 aa13.04□□□□□ -0.32
BECN1-215ENST00000590764 RNF40O75150 1001 aa13.04□□□□□ -0.32
BECN1-215ENST00000590764 DNAJB2P25686 324 aa13.04□□□□□ -0.32
BECN1-215ENST00000590764 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
BECN1-215ENST00000590764 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
BECN1-215ENST00000590764 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
BECN1-215ENST00000590764 RGS20O76081 388 aa13.01□□□□□ -0.33
BECN1-215ENST00000590764 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
BECN1-215ENST00000590764 ARHGEF11O15085 1522 aa13.01□□□□□ -0.33
BECN1-215ENST00000590764 GNPATO15228 680 aa13□□□□□ -0.33
BECN1-215ENST00000590764 APLP1P51693 650 aa13□□□□□ -0.33
BECN1-215ENST00000590764 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
BECN1-215ENST00000590764 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
BECN1-215ENST00000590764 OATP04181 439 aa12.98□□□□□ -0.33
BECN1-215ENST00000590764 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
BECN1-215ENST00000590764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
BECN1-215ENST00000590764 FECHP22830 423 aa12.97□□□□□ -0.33
BECN1-215ENST00000590764 MTRQ99707 1265 aa12.97□□□□□ -0.33
BECN1-215ENST00000590764 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
BECN1-215ENST00000590764 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
BECN1-215ENST00000590764 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
BECN1-215ENST00000590764 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
BECN1-215ENST00000590764 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
BECN1-215ENST00000590764 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
BECN1-215ENST00000590764 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
BECN1-215ENST00000590764 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
BECN1-215ENST00000590764 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
BECN1-215ENST00000590764 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
BECN1-215ENST00000590764 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
BECN1-215ENST00000590764 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
BECN1-215ENST00000590764 SLC10A3P09131 477 aa12.86□□□□□ -0.35
BECN1-215ENST00000590764 WIZO95785 1651 aa12.86□□□□□ -0.35
BECN1-215ENST00000590764 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
BECN1-215ENST00000590764 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
BECN1-215ENST00000590764 COPS2P61201 443 aa12.84□□□□□ -0.35
BECN1-215ENST00000590764 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
BECN1-215ENST00000590764 CFHP08603 1231 aa12.83□□□□□ -0.36
BECN1-215ENST00000590764 ZPR1O75312 459 aa12.81□□□□□ -0.36
BECN1-215ENST00000590764 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
BECN1-215ENST00000590764 PHOX2BQ99453 314 aa12.81□□□□□ -0.36
BECN1-215ENST00000590764 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
BECN1-215ENST00000590764 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
BECN1-215ENST00000590764 MAP2K5Q13163 448 aa12.79□□□□□ -0.36
BECN1-215ENST00000590764 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
BECN1-215ENST00000590764 PPP1R18Q6NYC8 613 aa12.79□□□□□ -0.36
BECN1-215ENST00000590764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.36
BECN1-215ENST00000590764 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
BECN1-215ENST00000590764 CHD1O14646 1710 aa12.75□□□□□ -0.37
BECN1-215ENST00000590764 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.37
BECN1-215ENST00000590764 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
BECN1-215ENST00000590764 CFTRP13569 1480 aa12.74□□□□□ -0.37
BECN1-215ENST00000590764 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
BECN1-215ENST00000590764 IRF6O14896 467 aa12.73□□□□□ -0.37
BECN1-215ENST00000590764 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
BECN1-215ENST00000590764 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
BECN1-215ENST00000590764 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
BECN1-215ENST00000590764 GGCXP38435 758 aa12.71□□□□□ -0.37
BECN1-215ENST00000590764 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
BECN1-215ENST00000590764 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
BECN1-215ENST00000590764 NR1I2O75469 434 aa12.7□□□□□ -0.38
BECN1-215ENST00000590764 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
BECN1-215ENST00000590764 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
BECN1-215ENST00000590764 TLL1O43897 1013 aa12.69□□□□□ -0.38
BECN1-215ENST00000590764 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
BECN1-215ENST00000590764 GCGRP47871 477 aa12.67□□□□□ -0.38
BECN1-215ENST00000590764 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
BECN1-215ENST00000590764 PRKD2Q9BZL6 878 aa12.67□□□□□ -0.38
BECN1-215ENST00000590764 PUS10Q3MIT2 529 aaKnown RBP12.66□□□□□ -0.38
BECN1-215ENST00000590764 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
BECN1-215ENST00000590764 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
BECN1-215ENST00000590764 ADH1BP00325 375 aa12.65□□□□□ -0.38
BECN1-215ENST00000590764 FUT2Q10981 343 aa12.64□□□□□ -0.39
BECN1-215ENST00000590764 MORN1Q5T089 497 aa12.63□□□□□ -0.39
BECN1-215ENST00000590764 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
BECN1-215ENST00000590764 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
BECN1-215ENST00000590764 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
BECN1-215ENST00000590764 CD46P15529 392 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms