RNA–Protein interactions for RNA: ENST00000590764.1

BECN1-215, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-215ENST00000590764 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
BECN1-215ENST00000590764 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
BECN1-215ENST00000590764 SENP3Q9H4L4 574 aaPredicted RBP27.77■■■□□ 2.04
BECN1-215ENST00000590764 PHF23Q9BUL5 403 aaPredicted RBP27.52■■■□□ 2
BECN1-215ENST00000590764 FOXD1Q16676 465 aa25.82■■□□□ 1.72
BECN1-215ENST00000590764 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
BECN1-215ENST00000590764 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
BECN1-215ENST00000590764 ADRA2BP18089 450 aa24.37■■□□□ 1.49
BECN1-215ENST00000590764 PIAS4Q8N2W9 510 aaPredicted RBP24.21■■□□□ 1.47
BECN1-215ENST00000590764 MSH5O43196 834 aa24.03■■□□□ 1.44
BECN1-215ENST00000590764 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
BECN1-215ENST00000590764 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
BECN1-215ENST00000590764 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
BECN1-215ENST00000590764 PPP4R3CPQ6ZMV5 832 aa22.15■■□□□ 1.14
BECN1-215ENST00000590764 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
BECN1-215ENST00000590764 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
BECN1-215ENST00000590764 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
BECN1-215ENST00000590764 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
BECN1-215ENST00000590764 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
BECN1-215ENST00000590764 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
BECN1-215ENST00000590764 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
BECN1-215ENST00000590764 KCNA4P22459 653 aa21.04■□□□□ 0.96
BECN1-215ENST00000590764 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
BECN1-215ENST00000590764 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
BECN1-215ENST00000590764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
BECN1-215ENST00000590764 CACNB1Q02641 598 aaPredicted RBP20.34■□□□□ 0.85
BECN1-215ENST00000590764 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
BECN1-215ENST00000590764 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
BECN1-215ENST00000590764 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
BECN1-215ENST00000590764 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
BECN1-215ENST00000590764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
BECN1-215ENST00000590764 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
BECN1-215ENST00000590764 SPINK5Q9NQ38 1064 aaPredicted RBP19.6■□□□□ 0.73
BECN1-215ENST00000590764 MYCNP04198 464 aaPredicted RBP19.53■□□□□ 0.72
BECN1-215ENST00000590764 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
BECN1-215ENST00000590764 CAPN15O75808 1086 aa19.52■□□□□ 0.72
BECN1-215ENST00000590764 APLP2Q06481 763 aa19.52■□□□□ 0.72
BECN1-215ENST00000590764 SAMD1Q6SPF0 538 aaPredicted RBP19.5■□□□□ 0.71
BECN1-215ENST00000590764 ZBTB22O15209 634 aa19.36■□□□□ 0.69
BECN1-215ENST00000590764 DSG3P32926 999 aa19.36■□□□□ 0.69
BECN1-215ENST00000590764 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
BECN1-215ENST00000590764 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
BECN1-215ENST00000590764 ABCB7O75027 752 aa19.09■□□□□ 0.65
BECN1-215ENST00000590764 ATF5Q9Y2D1 282 aaPredicted RBP19.03■□□□□ 0.64
BECN1-215ENST00000590764 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
BECN1-215ENST00000590764 POLA2Q14181 598 aa18.89■□□□□ 0.61
BECN1-215ENST00000590764 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.6
BECN1-215ENST00000590764 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
BECN1-215ENST00000590764 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
BECN1-215ENST00000590764 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
BECN1-215ENST00000590764 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
BECN1-215ENST00000590764 FBLN2P98095 1184 aa18.26■□□□□ 0.51
BECN1-215ENST00000590764 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
BECN1-215ENST00000590764 AKT1S1Q96B36 256 aa18.13■□□□□ 0.49
BECN1-215ENST00000590764 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
BECN1-215ENST00000590764 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
BECN1-215ENST00000590764 SPDYE2Q495Y8 402 aa18.03■□□□□ 0.48
BECN1-215ENST00000590764 REM2Q8IYK8 340 aaPredicted RBP17.95■□□□□ 0.46
BECN1-215ENST00000590764 POTEHQ6S545 545 aa17.92■□□□□ 0.46
BECN1-215ENST00000590764 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
BECN1-215ENST00000590764 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
BECN1-215ENST00000590764 SSUH2Q9Y2M2 353 aa17.85■□□□□ 0.45
BECN1-215ENST00000590764 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
BECN1-215ENST00000590764 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
BECN1-215ENST00000590764 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
BECN1-215ENST00000590764 PIP4P2Q8N4L2 257 aa17.55■□□□□ 0.4
BECN1-215ENST00000590764 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.4
BECN1-215ENST00000590764 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
BECN1-215ENST00000590764 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
BECN1-215ENST00000590764 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
BECN1-215ENST00000590764 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
BECN1-215ENST00000590764 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
BECN1-215ENST00000590764 PROM2Q8N271 834 aa17.21■□□□□ 0.35
BECN1-215ENST00000590764 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
BECN1-215ENST00000590764 HAX1O00165 279 aa17.1■□□□□ 0.33
BECN1-215ENST00000590764 FKBP8Q14318 412 aa17.02■□□□□ 0.32
BECN1-215ENST00000590764 SP7Q8TDD2 431 aaPredicted RBP16.99■□□□□ 0.31
BECN1-215ENST00000590764 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
BECN1-215ENST00000590764 FARP1Q9Y4F1 1045 aaPredicted RBP16.97■□□□□ 0.31
BECN1-215ENST00000590764 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
BECN1-215ENST00000590764 EVX2Q03828 476 aa16.94■□□□□ 0.3
BECN1-215ENST00000590764 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
BECN1-215ENST00000590764 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
BECN1-215ENST00000590764 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
BECN1-215ENST00000590764 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
BECN1-215ENST00000590764 MIER1Q8N108 512 aa16.64■□□□□ 0.25
BECN1-215ENST00000590764 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
BECN1-215ENST00000590764 GABBR2O75899 941 aa16.59■□□□□ 0.25
BECN1-215ENST00000590764 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
BECN1-215ENST00000590764 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
BECN1-215ENST00000590764 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
BECN1-215ENST00000590764 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
BECN1-215ENST00000590764 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.24
BECN1-215ENST00000590764 CLCN6P51797 869 aa16.52■□□□□ 0.24
BECN1-215ENST00000590764 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
BECN1-215ENST00000590764 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
BECN1-215ENST00000590764 PHF12Q96QT6 1004 aa16.37■□□□□ 0.21
BECN1-215ENST00000590764 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
BECN1-215ENST00000590764 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
BECN1-215ENST00000590764 NUBP1P53384 320 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms