RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
GCDH-211ENST00000590472 PLEKHG1Q9ULL1 1385 aa24■■□□□ 1.43
GCDH-211ENST00000590472 UBAP1LF5GYI3 381 aa23.99■■□□□ 1.43
GCDH-211ENST00000590472 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
GCDH-211ENST00000590472 HDGFP51858 240 aaKnown RBP23.98■■□□□ 1.43
GCDH-211ENST00000590472 PPP1R15AO75807 674 aaPredicted RBP23.96■■□□□ 1.43
GCDH-211ENST00000590472 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
GCDH-211ENST00000590472 NUTM2DQ5VT03 806 aaPredicted RBP23.95■■□□□ 1.42
GCDH-211ENST00000590472 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
GCDH-211ENST00000590472 XIRP1Q702N8 1843 aaKnown RBP23.94■■□□□ 1.42
GCDH-211ENST00000590472 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
GCDH-211ENST00000590472 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
GCDH-211ENST00000590472 BCANQ96GW7 911 aa23.93■■□□□ 1.42
GCDH-211ENST00000590472 KIF1BO60333 1816 aa23.93■■□□□ 1.42
GCDH-211ENST00000590472 NWD1Q149M9 1564 aa23.92■■□□□ 1.42
GCDH-211ENST00000590472 KCNA6P17658 529 aa23.91■■□□□ 1.42
GCDH-211ENST00000590472 ADAMTS13Q76LX8 1427 aa23.91■■□□□ 1.42
GCDH-211ENST00000590472 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.42
GCDH-211ENST00000590472 FOXD1Q16676 465 aa23.89■■□□□ 1.41
GCDH-211ENST00000590472 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
GCDH-211ENST00000590472 DIP2AQ14689 1571 aa23.88■■□□□ 1.41
GCDH-211ENST00000590472 TOM1O60784 492 aa23.88■■□□□ 1.41
GCDH-211ENST00000590472 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
GCDH-211ENST00000590472 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
GCDH-211ENST00000590472 ZNF326Q5BKZ1 582 aaKnown RBP23.87■■□□□ 1.41
GCDH-211ENST00000590472 NRXN3Q9Y4C0 1643 aa23.87■■□□□ 1.41
GCDH-211ENST00000590472 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
GCDH-211ENST00000590472 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
GCDH-211ENST00000590472 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
GCDH-211ENST00000590472 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
GCDH-211ENST00000590472 TMEM94Q12767 1356 aa23.84■■□□□ 1.41
GCDH-211ENST00000590472 PIP4K2BP78356 416 aa23.83■■□□□ 1.41
GCDH-211ENST00000590472 PROSER2Q86WR7 435 aaPredicted RBP23.81■■□□□ 1.4
GCDH-211ENST00000590472 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
GCDH-211ENST00000590472 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
GCDH-211ENST00000590472 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
GCDH-211ENST00000590472 CCDC144AA2RUR9 1427 aa23.78■■□□□ 1.4
GCDH-211ENST00000590472 PPLO60437 1756 aa23.77■■□□□ 1.4
GCDH-211ENST00000590472 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
GCDH-211ENST00000590472 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
GCDH-211ENST00000590472 SPATA31E1Q6ZUB1 1445 aa23.74■■□□□ 1.39
GCDH-211ENST00000590472 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
GCDH-211ENST00000590472 HSPA1LP34931 641 aa23.72■■□□□ 1.39
GCDH-211ENST00000590472 METP08581 1390 aa23.72■■□□□ 1.39
GCDH-211ENST00000590472 VGFO15240 615 aaPredicted RBP23.71■■□□□ 1.39
GCDH-211ENST00000590472 AMOTL2Q9Y2J4 779 aa23.71■■□□□ 1.39
GCDH-211ENST00000590472 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.39
GCDH-211ENST00000590472 HRCP23327 699 aa23.7■■□□□ 1.38
GCDH-211ENST00000590472 IFT172Q9UG01 1749 aa23.7■■□□□ 1.38
GCDH-211ENST00000590472 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
GCDH-211ENST00000590472 MSH6P52701 1360 aa23.68■■□□□ 1.38
GCDH-211ENST00000590472 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
GCDH-211ENST00000590472 FAM135BQ49AJ0 1406 aa23.65■■□□□ 1.38
GCDH-211ENST00000590472 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.63■■□□□ 1.37
GCDH-211ENST00000590472 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
GCDH-211ENST00000590472 ROBO1Q9Y6N7 1651 aa23.62■■□□□ 1.37
GCDH-211ENST00000590472 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
GCDH-211ENST00000590472 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
GCDH-211ENST00000590472 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
GCDH-211ENST00000590472 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
GCDH-211ENST00000590472 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
GCDH-211ENST00000590472 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
GCDH-211ENST00000590472 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
GCDH-211ENST00000590472 PTCH1Q13635 1447 aa23.55■■□□□ 1.36
GCDH-211ENST00000590472 CADPS2Q86UW7 1296 aa23.54■■□□□ 1.36
GCDH-211ENST00000590472 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
GCDH-211ENST00000590472 DCCP43146 1447 aa23.53■■□□□ 1.36
GCDH-211ENST00000590472 MYOM2P54296 1465 aa23.53■■□□□ 1.36
GCDH-211ENST00000590472 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
GCDH-211ENST00000590472 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
GCDH-211ENST00000590472 ATF3P18847 181 aa23.52■■□□□ 1.36
GCDH-211ENST00000590472 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
GCDH-211ENST00000590472 ADGRL3Q9HAR2 1447 aa23.51■■□□□ 1.35
GCDH-211ENST00000590472 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
GCDH-211ENST00000590472 PHLPP1O60346 1717 aa23.47■■□□□ 1.35
GCDH-211ENST00000590472 MST1RQ04912 1400 aa23.46■■□□□ 1.35
GCDH-211ENST00000590472 LAMC1P11047 1609 aa23.45■■□□□ 1.34
GCDH-211ENST00000590472 TECPR2O15040 1411 aa23.45■■□□□ 1.34
GCDH-211ENST00000590472 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
GCDH-211ENST00000590472 C14orf93Q9H972 538 aaKnown RBP23.45■■□□□ 1.34
GCDH-211ENST00000590472 KNDC1Q76NI1 1749 aa23.45■■□□□ 1.34
GCDH-211ENST00000590472 LRPPRCP42704 1394 aaKnown RBP23.44■■□□□ 1.34
GCDH-211ENST00000590472 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
GCDH-211ENST00000590472 AHDC1Q5TGY3 1603 aaPredicted RBP23.42■■□□□ 1.34
GCDH-211ENST00000590472 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
GCDH-211ENST00000590472 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
GCDH-211ENST00000590472 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
GCDH-211ENST00000590472 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
GCDH-211ENST00000590472 STK26Q9P289 416 aa23.41■■□□□ 1.34
GCDH-211ENST00000590472 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
GCDH-211ENST00000590472 DCAF11Q8TEB1 546 aa23.39■■□□□ 1.33
GCDH-211ENST00000590472 ILDR2Q71H61 639 aa23.38■■□□□ 1.33
GCDH-211ENST00000590472 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
GCDH-211ENST00000590472 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
GCDH-211ENST00000590472 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
GCDH-211ENST00000590472 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
GCDH-211ENST00000590472 NHSL1Q5SYE7 1610 aa23.36■■□□□ 1.33
GCDH-211ENST00000590472 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
GCDH-211ENST00000590472 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
GCDH-211ENST00000590472 STAC3Q96MF2 364 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms