RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 NEURL4Q96JN8 1562 aa24.61■■□□□ 1.53
LSM14A-208ENST00000590416 LTKP29376 864 aa24.6■■□□□ 1.53
LSM14A-208ENST00000590416 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
LSM14A-208ENST00000590416 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
LSM14A-208ENST00000590416 NPHP4O75161 1426 aaPredicted RBP24.59■■□□□ 1.53
LSM14A-208ENST00000590416 BCANQ96GW7 911 aa24.58■■□□□ 1.53
LSM14A-208ENST00000590416 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
LSM14A-208ENST00000590416 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
LSM14A-208ENST00000590416 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.57■■□□□ 1.52
LSM14A-208ENST00000590416 ZFYVE9O95405 1425 aa24.56■■□□□ 1.52
LSM14A-208ENST00000590416 RGL3Q3MIN7 710 aa24.56■■□□□ 1.52
LSM14A-208ENST00000590416 MED14O60244 1454 aa24.55■■□□□ 1.52
LSM14A-208ENST00000590416 NEXMIFQ5QGS0 1516 aa24.52■■□□□ 1.52
LSM14A-208ENST00000590416 PPLO60437 1756 aa24.51■■□□□ 1.51
LSM14A-208ENST00000590416 SPATA31E1Q6ZUB1 1445 aa24.5■■□□□ 1.51
LSM14A-208ENST00000590416 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
LSM14A-208ENST00000590416 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
LSM14A-208ENST00000590416 IFT172Q9UG01 1749 aa24.45■■□□□ 1.5
LSM14A-208ENST00000590416 VGFO15240 615 aaPredicted RBP24.45■■□□□ 1.5
LSM14A-208ENST00000590416 SLC26A8Q96RN1 970 aa24.44■■□□□ 1.5
LSM14A-208ENST00000590416 NEUROD1Q13562 356 aa24.43■■□□□ 1.5
LSM14A-208ENST00000590416 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
LSM14A-208ENST00000590416 ZNF335Q9H4Z2 1342 aaPredicted RBP24.41■■□□□ 1.5
LSM14A-208ENST00000590416 DIP2AQ14689 1571 aa24.38■■□□□ 1.49
LSM14A-208ENST00000590416 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
LSM14A-208ENST00000590416 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
LSM14A-208ENST00000590416 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
LSM14A-208ENST00000590416 DCAF11Q8TEB1 546 aa24.36■■□□□ 1.49
LSM14A-208ENST00000590416 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
LSM14A-208ENST00000590416 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
LSM14A-208ENST00000590416 MYOM2P54296 1465 aa24.33■■□□□ 1.49
LSM14A-208ENST00000590416 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.49
LSM14A-208ENST00000590416 TBX22Q9Y458 520 aa24.33■■□□□ 1.49
LSM14A-208ENST00000590416 STRCP1A6NGW2 1772 aa24.31■■□□□ 1.48
LSM14A-208ENST00000590416 LTBP4Q8N2S1 1624 aa24.3■■□□□ 1.48
LSM14A-208ENST00000590416 ALKQ9UM73 1620 aa24.3■■□□□ 1.48
LSM14A-208ENST00000590416 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
LSM14A-208ENST00000590416 CPS1P31327 1500 aa24.29■■□□□ 1.48
LSM14A-208ENST00000590416 PIK3C2GO75747 1445 aa24.27■■□□□ 1.48
LSM14A-208ENST00000590416 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
LSM14A-208ENST00000590416 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
LSM14A-208ENST00000590416 KCNA6P17658 529 aa24.26■■□□□ 1.47
LSM14A-208ENST00000590416 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 L3MBTL2Q969R5 705 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 STAC3Q96MF2 364 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 METP08581 1390 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 NRXN1Q9ULB1 1477 aa24.25■■□□□ 1.47
LSM14A-208ENST00000590416 CERKQ8TCT0 537 aa24.24■■□□□ 1.47
LSM14A-208ENST00000590416 LAMC1P11047 1609 aa24.24■■□□□ 1.47
LSM14A-208ENST00000590416 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
LSM14A-208ENST00000590416 CFAP70Q5T0N1 1121 aa24.21■■□□□ 1.47
LSM14A-208ENST00000590416 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
LSM14A-208ENST00000590416 NKTRP30414 1462 aaKnown RBP24.2■■□□□ 1.47
LSM14A-208ENST00000590416 PTPRUQ92729 1446 aa24.2■■□□□ 1.46
LSM14A-208ENST00000590416 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
LSM14A-208ENST00000590416 C14orf93Q9H972 538 aaKnown RBP24.18■■□□□ 1.46
LSM14A-208ENST00000590416 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
LSM14A-208ENST00000590416 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
LSM14A-208ENST00000590416 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
LSM14A-208ENST00000590416 STK26Q9P289 416 aa24.16■■□□□ 1.46
LSM14A-208ENST00000590416 RBM33Q96EV2 1170 aaKnown RBP24.15■■□□□ 1.46
LSM14A-208ENST00000590416 PRAG1Q86YV5 1406 aa24.15■■□□□ 1.46
LSM14A-208ENST00000590416 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
LSM14A-208ENST00000590416 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.45
LSM14A-208ENST00000590416 C14orf37Q86TY3 774 aa24.13■■□□□ 1.45
LSM14A-208ENST00000590416 TMEM94Q12767 1356 aa24.13■■□□□ 1.45
LSM14A-208ENST00000590416 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
LSM14A-208ENST00000590416 KIAA1210Q9ULL0 1709 aa24.11■■□□□ 1.45
LSM14A-208ENST00000590416 YTHDC2Q9H6S0 1430 aaKnown RBP24.1■■□□□ 1.45
LSM14A-208ENST00000590416 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
LSM14A-208ENST00000590416 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
LSM14A-208ENST00000590416 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
LSM14A-208ENST00000590416 TRPM1Q7Z4N2 1603 aa24.06■■□□□ 1.44
LSM14A-208ENST00000590416 ADGRB1O14514 1584 aa24.06■■□□□ 1.44
LSM14A-208ENST00000590416 MSH6P52701 1360 aa24.05■■□□□ 1.44
LSM14A-208ENST00000590416 ROBO2Q9HCK4 1378 aa24.05■■□□□ 1.44
LSM14A-208ENST00000590416 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
LSM14A-208ENST00000590416 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
LSM14A-208ENST00000590416 NBPF1Q3BBV0 1214 aa24.03■■□□□ 1.44
LSM14A-208ENST00000590416 TRAK1Q9UPV9 953 aa24.03■■□□□ 1.44
LSM14A-208ENST00000590416 TECPR2O15040 1411 aa24.02■■□□□ 1.44
LSM14A-208ENST00000590416 NBPF8Q3BBV2 869 aa24.02■■□□□ 1.44
LSM14A-208ENST00000590416 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
LSM14A-208ENST00000590416 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
LSM14A-208ENST00000590416 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
LSM14A-208ENST00000590416 TOM1O60784 492 aa24■■□□□ 1.43
LSM14A-208ENST00000590416 WAPLQ7Z5K2 1190 aa24■■□□□ 1.43
LSM14A-208ENST00000590416 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
LSM14A-208ENST00000590416 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
LSM14A-208ENST00000590416 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
LSM14A-208ENST00000590416 POGKQ9P215 609 aa23.99■■□□□ 1.43
LSM14A-208ENST00000590416 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
LSM14A-208ENST00000590416 DLC1Q96QB1 1528 aa23.98■■□□□ 1.43
LSM14A-208ENST00000590416 ARHGEF28Q8N1W1 1705 aaKnown RBP23.97■■□□□ 1.43
LSM14A-208ENST00000590416 PRAM1Q96QH2 718 aa23.97■■□□□ 1.43
LSM14A-208ENST00000590416 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
LSM14A-208ENST00000590416 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
LSM14A-208ENST00000590416 FAM135BQ49AJ0 1406 aa23.96■■□□□ 1.43
LSM14A-208ENST00000590416 ATF3P18847 181 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms