RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 NWD1Q149M9 1564 aa23.83■■□□□ 1.41
GHDC-210ENST00000590249 TOM1O60784 492 aa23.83■■□□□ 1.41
GHDC-210ENST00000590249 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
GHDC-210ENST00000590249 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
GHDC-210ENST00000590249 PLEKHG1Q9ULL1 1385 aa23.8■■□□□ 1.4
GHDC-210ENST00000590249 HFM1A2PYH4 1435 aa23.8■■□□□ 1.4
GHDC-210ENST00000590249 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
GHDC-210ENST00000590249 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
GHDC-210ENST00000590249 CLTCL1P53675 1640 aa23.77■■□□□ 1.4
GHDC-210ENST00000590249 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
GHDC-210ENST00000590249 HSPA1LP34931 641 aa23.76■■□□□ 1.39
GHDC-210ENST00000590249 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
GHDC-210ENST00000590249 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
GHDC-210ENST00000590249 TRPM2O94759 1503 aa23.74■■□□□ 1.39
GHDC-210ENST00000590249 KCNA6P17658 529 aa23.74■■□□□ 1.39
GHDC-210ENST00000590249 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
GHDC-210ENST00000590249 BCANQ96GW7 911 aa23.74■■□□□ 1.39
GHDC-210ENST00000590249 TMEM94Q12767 1356 aa23.74■■□□□ 1.39
GHDC-210ENST00000590249 ADAMTS13Q76LX8 1427 aa23.73■■□□□ 1.39
GHDC-210ENST00000590249 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
GHDC-210ENST00000590249 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.7■■□□□ 1.38
GHDC-210ENST00000590249 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
GHDC-210ENST00000590249 RBM33Q96EV2 1170 aaKnown RBP23.69■■□□□ 1.38
GHDC-210ENST00000590249 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
GHDC-210ENST00000590249 KIF1BO60333 1816 aa23.66■■□□□ 1.38
GHDC-210ENST00000590249 PROSER2Q86WR7 435 aaPredicted RBP23.66■■□□□ 1.38
GHDC-210ENST00000590249 NEXMIFQ5QGS0 1516 aa23.65■■□□□ 1.38
GHDC-210ENST00000590249 TRIM52Q96A61 297 aa23.65■■□□□ 1.38
GHDC-210ENST00000590249 MED1Q15648 1581 aaPredicted RBP23.65■■□□□ 1.38
GHDC-210ENST00000590249 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
GHDC-210ENST00000590249 SETBP1Q9Y6X0 1596 aa23.64■■□□□ 1.37
GHDC-210ENST00000590249 ILDR2Q71H61 639 aa23.63■■□□□ 1.37
GHDC-210ENST00000590249 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
GHDC-210ENST00000590249 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
GHDC-210ENST00000590249 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
GHDC-210ENST00000590249 ZNF326Q5BKZ1 582 aaKnown RBP23.59■■□□□ 1.37
GHDC-210ENST00000590249 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
GHDC-210ENST00000590249 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
GHDC-210ENST00000590249 MSH6P52701 1360 aa23.57■■□□□ 1.36
GHDC-210ENST00000590249 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
GHDC-210ENST00000590249 FOXD1Q16676 465 aa23.54■■□□□ 1.36
GHDC-210ENST00000590249 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
GHDC-210ENST00000590249 PPLO60437 1756 aa23.52■■□□□ 1.36
GHDC-210ENST00000590249 SETD1AO15047 1707 aaKnown RBP23.52■■□□□ 1.36
GHDC-210ENST00000590249 METP08581 1390 aa23.51■■□□□ 1.35
GHDC-210ENST00000590249 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
GHDC-210ENST00000590249 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
GHDC-210ENST00000590249 C14orf37Q86TY3 774 aa23.46■■□□□ 1.35
GHDC-210ENST00000590249 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
GHDC-210ENST00000590249 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
GHDC-210ENST00000590249 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
GHDC-210ENST00000590249 SLAIN2Q9P270 581 aa23.44■■□□□ 1.34
GHDC-210ENST00000590249 IFT172Q9UG01 1749 aa23.44■■□□□ 1.34
GHDC-210ENST00000590249 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
GHDC-210ENST00000590249 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
GHDC-210ENST00000590249 SPATA31E1Q6ZUB1 1445 aa23.41■■□□□ 1.34
GHDC-210ENST00000590249 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
GHDC-210ENST00000590249 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
GHDC-210ENST00000590249 RPGRIP1LQ68CZ1 1315 aa23.39■■□□□ 1.34
GHDC-210ENST00000590249 DCCP43146 1447 aa23.39■■□□□ 1.33
GHDC-210ENST00000590249 RAB3GAP2Q9H2M9 1393 aa23.39■■□□□ 1.33
GHDC-210ENST00000590249 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
GHDC-210ENST00000590249 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
GHDC-210ENST00000590249 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
GHDC-210ENST00000590249 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
GHDC-210ENST00000590249 SOCS7O14512 581 aa23.36■■□□□ 1.33
GHDC-210ENST00000590249 ATF3P18847 181 aa23.36■■□□□ 1.33
GHDC-210ENST00000590249 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
GHDC-210ENST00000590249 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
GHDC-210ENST00000590249 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
GHDC-210ENST00000590249 MST1RQ04912 1400 aa23.33■■□□□ 1.33
GHDC-210ENST00000590249 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
GHDC-210ENST00000590249 ADGRF5Q8IZF2 1346 aa23.33■■□□□ 1.32
GHDC-210ENST00000590249 RGL3Q3MIN7 710 aa23.32■■□□□ 1.32
GHDC-210ENST00000590249 ASXL1Q8IXJ9 1541 aa23.32■■□□□ 1.32
GHDC-210ENST00000590249 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
GHDC-210ENST00000590249 NHSL1Q5SYE7 1610 aa23.29■■□□□ 1.32
GHDC-210ENST00000590249 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
GHDC-210ENST00000590249 JCADQ9P266 1359 aa23.28■■□□□ 1.32
GHDC-210ENST00000590249 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
GHDC-210ENST00000590249 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
GHDC-210ENST00000590249 SHPRHQ149N8 1683 aa23.27■■□□□ 1.32
GHDC-210ENST00000590249 RGS17Q9UGC6 210 aaPredicted RBP23.26■■□□□ 1.31
GHDC-210ENST00000590249 KNDC1Q76NI1 1749 aa23.25■■□□□ 1.31
GHDC-210ENST00000590249 LRP6O75581 1613 aa23.23■■□□□ 1.31
GHDC-210ENST00000590249 TECPR2O15040 1411 aa23.21■■□□□ 1.31
GHDC-210ENST00000590249 MYOM2P54296 1465 aa23.21■■□□□ 1.31
GHDC-210ENST00000590249 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
GHDC-210ENST00000590249 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
GHDC-210ENST00000590249 C1orf167Q5SNV9 1468 aa23.2■■□□□ 1.3
GHDC-210ENST00000590249 LAMC1P11047 1609 aa23.19■■□□□ 1.3
GHDC-210ENST00000590249 LRPPRCP42704 1394 aaKnown RBP23.18■■□□□ 1.3
GHDC-210ENST00000590249 DDX17Q92841 729 aaKnown RBP23.17■■□□□ 1.3
GHDC-210ENST00000590249 TMEM132EQ6IEE7 984 aa23.16■■□□□ 1.3
GHDC-210ENST00000590249 STK26Q9P289 416 aa23.16■■□□□ 1.3
GHDC-210ENST00000590249 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.3
GHDC-210ENST00000590249 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
GHDC-210ENST00000590249 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
GHDC-210ENST00000590249 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
GHDC-210ENST00000590249 POTEAQ6S8J7 498 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms