RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 SPHKAPQ2M3C7 1700 aa27.06■■□□□ 1.92
CIRBP-227ENST00000590188 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
CIRBP-227ENST00000590188 ZFYVE9O95405 1425 aa27.04■■□□□ 1.92
CIRBP-227ENST00000590188 SLC4A1APQ9BWU0 796 aaKnown RBP27.01■■□□□ 1.91
CIRBP-227ENST00000590188 LRRC7Q96NW7 1537 aa26.98■■□□□ 1.91
CIRBP-227ENST00000590188 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
CIRBP-227ENST00000590188 HDGFP51858 240 aaKnown RBP26.97■■□□□ 1.91
CIRBP-227ENST00000590188 CLTCL1P53675 1640 aa26.96■■□□□ 1.91
CIRBP-227ENST00000590188 PLEKHG1Q9ULL1 1385 aa26.96■■□□□ 1.91
CIRBP-227ENST00000590188 PIP4K2BP78356 416 aa26.95■■□□□ 1.9
CIRBP-227ENST00000590188 FOXD1Q16676 465 aa26.95■■□□□ 1.9
CIRBP-227ENST00000590188 ZNF326Q5BKZ1 582 aaKnown RBP26.95■■□□□ 1.9
CIRBP-227ENST00000590188 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.95■■□□□ 1.9
CIRBP-227ENST00000590188 TRPM2O94759 1503 aa26.95■■□□□ 1.9
CIRBP-227ENST00000590188 TOM1O60784 492 aa26.9■■□□□ 1.9
CIRBP-227ENST00000590188 KCNA6P17658 529 aa26.9■■□□□ 1.9
CIRBP-227ENST00000590188 RBM33Q96EV2 1170 aaKnown RBP26.89■■□□□ 1.9
CIRBP-227ENST00000590188 SETD5Q9C0A6 1442 aa26.89■■□□□ 1.89
CIRBP-227ENST00000590188 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
CIRBP-227ENST00000590188 PROSER2Q86WR7 435 aaPredicted RBP26.85■■□□□ 1.89
CIRBP-227ENST00000590188 ADAMTS13Q76LX8 1427 aa26.84■■□□□ 1.89
CIRBP-227ENST00000590188 KIF1BO60333 1816 aa26.84■■□□□ 1.89
CIRBP-227ENST00000590188 TMEM94Q12767 1356 aa26.84■■□□□ 1.89
CIRBP-227ENST00000590188 XIRP1Q702N8 1843 aaKnown RBP26.83■■□□□ 1.89
CIRBP-227ENST00000590188 ALKQ9UM73 1620 aa26.83■■□□□ 1.89
CIRBP-227ENST00000590188 NWD1Q149M9 1564 aa26.83■■□□□ 1.89
CIRBP-227ENST00000590188 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.88
CIRBP-227ENST00000590188 TBX22Q9Y458 520 aa26.82■■□□□ 1.88
CIRBP-227ENST00000590188 NEXMIFQ5QGS0 1516 aa26.8■■□□□ 1.88
CIRBP-227ENST00000590188 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
CIRBP-227ENST00000590188 CHD2O14647 1828 aaKnown RBP26.78■■□□□ 1.88
CIRBP-227ENST00000590188 DIP2AQ14689 1571 aa26.77■■□□□ 1.88
CIRBP-227ENST00000590188 HSPA1LP34931 641 aa26.76■■□□□ 1.87
CIRBP-227ENST00000590188 NRXN3Q9Y4C0 1643 aa26.76■■□□□ 1.87
CIRBP-227ENST00000590188 CCDC144AA2RUR9 1427 aa26.74■■□□□ 1.87
CIRBP-227ENST00000590188 SETBP1Q9Y6X0 1596 aa26.73■■□□□ 1.87
CIRBP-227ENST00000590188 PTPRUQ92729 1446 aa26.72■■□□□ 1.87
CIRBP-227ENST00000590188 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
CIRBP-227ENST00000590188 AMOTL2Q9Y2J4 779 aa26.7■■□□□ 1.86
CIRBP-227ENST00000590188 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
CIRBP-227ENST00000590188 C14orf37Q86TY3 774 aa26.68■■□□□ 1.86
CIRBP-227ENST00000590188 METP08581 1390 aa26.68■■□□□ 1.86
CIRBP-227ENST00000590188 ACIN1Q9UKV3 1341 aaKnown RBP26.67■■□□□ 1.86
CIRBP-227ENST00000590188 MSH6P52701 1360 aa26.67■■□□□ 1.86
CIRBP-227ENST00000590188 VGFO15240 615 aaPredicted RBP26.66■■□□□ 1.86
CIRBP-227ENST00000590188 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
CIRBP-227ENST00000590188 PPLO60437 1756 aa26.64■■□□□ 1.86
CIRBP-227ENST00000590188 SPATA31E1Q6ZUB1 1445 aa26.62■■□□□ 1.85
CIRBP-227ENST00000590188 DISP3Q9P2K9 1392 aa26.61■■□□□ 1.85
CIRBP-227ENST00000590188 XRN1Q8IZH2 1706 aaKnown RBP26.6■■□□□ 1.85
CIRBP-227ENST00000590188 ADGRF5Q8IZF2 1346 aa26.59■■□□□ 1.85
CIRBP-227ENST00000590188 ROBO1Q9Y6N7 1651 aa26.55■■□□□ 1.84
CIRBP-227ENST00000590188 SETD1AO15047 1707 aaKnown RBP26.55■■□□□ 1.84
CIRBP-227ENST00000590188 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
CIRBP-227ENST00000590188 NCOA3Q9Y6Q9 1424 aa26.55■■□□□ 1.84
CIRBP-227ENST00000590188 SLAIN2Q9P270 581 aa26.54■■□□□ 1.84
CIRBP-227ENST00000590188 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
CIRBP-227ENST00000590188 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-227ENST00000590188 ATF3P18847 181 aa26.52■■□□□ 1.84
CIRBP-227ENST00000590188 HRCP23327 699 aa26.52■■□□□ 1.84
CIRBP-227ENST00000590188 IFT172Q9UG01 1749 aa26.52■■□□□ 1.84
CIRBP-227ENST00000590188 ANKRD30BQ9BXX2 1392 aa26.51■■□□□ 1.83
CIRBP-227ENST00000590188 CADPS2Q86UW7 1296 aa26.48■■□□□ 1.83
CIRBP-227ENST00000590188 ROBO2Q9HCK4 1378 aa26.46■■□□□ 1.83
CIRBP-227ENST00000590188 MED1Q15648 1581 aaPredicted RBP26.45■■□□□ 1.82
CIRBP-227ENST00000590188 STK26Q9P289 416 aa26.44■■□□□ 1.82
CIRBP-227ENST00000590188 PIK3C2GO75747 1445 aa26.43■■□□□ 1.82
CIRBP-227ENST00000590188 PTCH1Q13635 1447 aa26.43■■□□□ 1.82
CIRBP-227ENST00000590188 TMEM132EQ6IEE7 984 aa26.43■■□□□ 1.82
CIRBP-227ENST00000590188 NALCNQ8IZF0 1738 aa26.42■■□□□ 1.82
CIRBP-227ENST00000590188 ADGRL3Q9HAR2 1447 aa26.42■■□□□ 1.82
CIRBP-227ENST00000590188 ASXL1Q8IXJ9 1541 aa26.4■■□□□ 1.82
CIRBP-227ENST00000590188 DCCP43146 1447 aa26.39■■□□□ 1.82
CIRBP-227ENST00000590188 PHLPP1O60346 1717 aa26.39■■□□□ 1.82
CIRBP-227ENST00000590188 ILDR2Q71H61 639 aa26.38■■□□□ 1.81
CIRBP-227ENST00000590188 KDM2AQ9Y2K7 1162 aa26.38■■□□□ 1.81
CIRBP-227ENST00000590188 MYOM2P54296 1465 aa26.37■■□□□ 1.81
CIRBP-227ENST00000590188 CFAP70Q5T0N1 1121 aa26.37■■□□□ 1.81
CIRBP-227ENST00000590188 MST1RQ04912 1400 aa26.37■■□□□ 1.81
CIRBP-227ENST00000590188 BRINP3Q76B58 766 aa26.36■■□□□ 1.81
CIRBP-227ENST00000590188 NRXN1Q9ULB1 1477 aa26.35■■□□□ 1.81
CIRBP-227ENST00000590188 LRPPRCP42704 1394 aaKnown RBP26.34■■□□□ 1.81
CIRBP-227ENST00000590188 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
CIRBP-227ENST00000590188 DCAF11Q8TEB1 546 aa26.34■■□□□ 1.81
CIRBP-227ENST00000590188 WAPLQ7Z5K2 1190 aa26.33■■□□□ 1.81
CIRBP-227ENST00000590188 PHF23Q9BUL5 403 aaPredicted RBP26.33■■□□□ 1.81
CIRBP-227ENST00000590188 C14orf93Q9H972 538 aaKnown RBP26.33■■□□□ 1.81
CIRBP-227ENST00000590188 YTHDC2Q9H6S0 1430 aaKnown RBP26.31■■□□□ 1.8
CIRBP-227ENST00000590188 COL16A1Q07092 1604 aaPredicted RBP26.3■■□□□ 1.8
CIRBP-227ENST00000590188 PLEKHH1Q9ULM0 1364 aa26.3■■□□□ 1.8
CIRBP-227ENST00000590188 DDX17Q92841 729 aaKnown RBP26.28■■□□□ 1.8
CIRBP-227ENST00000590188 ABCC11Q96J66 1382 aa26.28■■□□□ 1.8
CIRBP-227ENST00000590188 TECPR2O15040 1411 aa26.28■■□□□ 1.8
CIRBP-227ENST00000590188 AHDC1Q5TGY3 1603 aaPredicted RBP26.28■■□□□ 1.8
CIRBP-227ENST00000590188 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
CIRBP-227ENST00000590188 C1orf167Q5SNV9 1468 aa26.27■■□□□ 1.8
CIRBP-227ENST00000590188 LAMC1P11047 1609 aa26.27■■□□□ 1.8
CIRBP-227ENST00000590188 KNDC1Q76NI1 1749 aa26.27■■□□□ 1.8
CIRBP-227ENST00000590188 JCADQ9P266 1359 aa26.26■■□□□ 1.79
CIRBP-227ENST00000590188 NUTM2FA1L443 756 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms