RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
NFIC-208ENST00000589537 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
NFIC-208ENST00000589537 MYO5BQ9ULV0 1848 aa24.99■■□□□ 1.59
NFIC-208ENST00000589537 TRPM2O94759 1503 aa24.96■■□□□ 1.59
NFIC-208ENST00000589537 KCNA6P17658 529 aa24.95■■□□□ 1.58
NFIC-208ENST00000589537 BCANQ96GW7 911 aa24.95■■□□□ 1.58
NFIC-208ENST00000589537 TRIM52Q96A61 297 aa24.94■■□□□ 1.58
NFIC-208ENST00000589537 SLC26A8Q96RN1 970 aa24.94■■□□□ 1.58
NFIC-208ENST00000589537 NKTRP30414 1462 aaKnown RBP24.93■■□□□ 1.58
NFIC-208ENST00000589537 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
NFIC-208ENST00000589537 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
NFIC-208ENST00000589537 DIP2AQ14689 1571 aa24.92■■□□□ 1.58
NFIC-208ENST00000589537 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.58
NFIC-208ENST00000589537 TBX22Q9Y458 520 aa24.89■■□□□ 1.58
NFIC-208ENST00000589537 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
NFIC-208ENST00000589537 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
NFIC-208ENST00000589537 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
NFIC-208ENST00000589537 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
NFIC-208ENST00000589537 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
NFIC-208ENST00000589537 TMEM94Q12767 1356 aa24.85■■□□□ 1.57
NFIC-208ENST00000589537 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
NFIC-208ENST00000589537 ADAMTS13Q76LX8 1427 aa24.84■■□□□ 1.57
NFIC-208ENST00000589537 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
NFIC-208ENST00000589537 XIRP1Q702N8 1843 aaKnown RBP24.83■■□□□ 1.57
NFIC-208ENST00000589537 CHD2O14647 1828 aaKnown RBP24.82■■□□□ 1.56
NFIC-208ENST00000589537 KIF1BO60333 1816 aa24.81■■□□□ 1.56
NFIC-208ENST00000589537 SETBP1Q9Y6X0 1596 aa24.8■■□□□ 1.56
NFIC-208ENST00000589537 NUTM2DQ5VT03 806 aaPredicted RBP24.8■■□□□ 1.56
NFIC-208ENST00000589537 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
NFIC-208ENST00000589537 HSPA1LP34931 641 aa24.78■■□□□ 1.56
NFIC-208ENST00000589537 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
NFIC-208ENST00000589537 SETD5Q9C0A6 1442 aa24.77■■□□□ 1.56
NFIC-208ENST00000589537 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
NFIC-208ENST00000589537 MSH6P52701 1360 aa24.76■■□□□ 1.55
NFIC-208ENST00000589537 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
NFIC-208ENST00000589537 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
NFIC-208ENST00000589537 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
NFIC-208ENST00000589537 MPHOSPH9Q99550 1183 aa24.73■■□□□ 1.55
NFIC-208ENST00000589537 FAM135BQ49AJ0 1406 aa24.72■■□□□ 1.55
NFIC-208ENST00000589537 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
NFIC-208ENST00000589537 VGFO15240 615 aaPredicted RBP24.7■■□□□ 1.54
NFIC-208ENST00000589537 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
NFIC-208ENST00000589537 AMOTL2Q9Y2J4 779 aa24.67■■□□□ 1.54
NFIC-208ENST00000589537 XRN1Q8IZH2 1706 aaKnown RBP24.66■■□□□ 1.54
NFIC-208ENST00000589537 PTPRUQ92729 1446 aa24.65■■□□□ 1.54
NFIC-208ENST00000589537 RAB3GAP2Q9H2M9 1393 aa24.65■■□□□ 1.54
NFIC-208ENST00000589537 FOXD1Q16676 465 aa24.64■■□□□ 1.54
NFIC-208ENST00000589537 C14orf37Q86TY3 774 aa24.64■■□□□ 1.54
NFIC-208ENST00000589537 C19orf44Q9H6X5 657 aa24.62■■□□□ 1.53
NFIC-208ENST00000589537 METP08581 1390 aa24.62■■□□□ 1.53
NFIC-208ENST00000589537 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
NFIC-208ENST00000589537 PPLO60437 1756 aa24.62■■□□□ 1.53
NFIC-208ENST00000589537 CADPS2Q86UW7 1296 aa24.61■■□□□ 1.53
NFIC-208ENST00000589537 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
NFIC-208ENST00000589537 DCCP43146 1447 aa24.6■■□□□ 1.53
NFIC-208ENST00000589537 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
NFIC-208ENST00000589537 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
NFIC-208ENST00000589537 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
NFIC-208ENST00000589537 ATF3P18847 181 aa24.58■■□□□ 1.53
NFIC-208ENST00000589537 HRCP23327 699 aa24.58■■□□□ 1.53
NFIC-208ENST00000589537 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.57■■□□□ 1.52
NFIC-208ENST00000589537 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
NFIC-208ENST00000589537 PRAG1Q86YV5 1406 aa24.55■■□□□ 1.52
NFIC-208ENST00000589537 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
NFIC-208ENST00000589537 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
NFIC-208ENST00000589537 RGL3Q3MIN7 710 aa24.51■■□□□ 1.51
NFIC-208ENST00000589537 ADGRL3Q9HAR2 1447 aa24.51■■□□□ 1.51
NFIC-208ENST00000589537 ADGRF5Q8IZF2 1346 aa24.47■■□□□ 1.51
NFIC-208ENST00000589537 PHLPP1O60346 1717 aa24.46■■□□□ 1.51
NFIC-208ENST00000589537 PIK3C2GO75747 1445 aa24.45■■□□□ 1.51
NFIC-208ENST00000589537 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
NFIC-208ENST00000589537 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
NFIC-208ENST00000589537 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
NFIC-208ENST00000589537 MYOM2P54296 1465 aa24.44■■□□□ 1.5
NFIC-208ENST00000589537 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
NFIC-208ENST00000589537 NALCNQ8IZF0 1738 aa24.43■■□□□ 1.5
NFIC-208ENST00000589537 MST1RQ04912 1400 aa24.43■■□□□ 1.5
NFIC-208ENST00000589537 JCADQ9P266 1359 aa24.42■■□□□ 1.5
NFIC-208ENST00000589537 COL16A1Q07092 1604 aaPredicted RBP24.41■■□□□ 1.5
NFIC-208ENST00000589537 NRXN1Q9ULB1 1477 aa24.39■■□□□ 1.5
NFIC-208ENST00000589537 TECPR2O15040 1411 aa24.39■■□□□ 1.5
NFIC-208ENST00000589537 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
NFIC-208ENST00000589537 LRPPRCP42704 1394 aaKnown RBP24.39■■□□□ 1.49
NFIC-208ENST00000589537 LAMC1P11047 1609 aa24.39■■□□□ 1.49
NFIC-208ENST00000589537 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
NFIC-208ENST00000589537 ABCC11Q96J66 1382 aa24.36■■□□□ 1.49
NFIC-208ENST00000589537 KNDC1Q76NI1 1749 aa24.35■■□□□ 1.49
NFIC-208ENST00000589537 STAC3Q96MF2 364 aa24.35■■□□□ 1.49
NFIC-208ENST00000589537 SOCS7O14512 581 aa24.34■■□□□ 1.49
NFIC-208ENST00000589537 C14orf93Q9H972 538 aaKnown RBP24.34■■□□□ 1.49
NFIC-208ENST00000589537 CDC42BPGQ6DT37 1551 aa24.33■■□□□ 1.48
NFIC-208ENST00000589537 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
NFIC-208ENST00000589537 C1orf167Q5SNV9 1468 aa24.32■■□□□ 1.48
NFIC-208ENST00000589537 NHSL1Q5SYE7 1610 aa24.32■■□□□ 1.48
NFIC-208ENST00000589537 YTHDC2Q9H6S0 1430 aaKnown RBP24.32■■□□□ 1.48
NFIC-208ENST00000589537 SHPRHQ149N8 1683 aa24.3■■□□□ 1.48
NFIC-208ENST00000589537 SIRT1Q96EB6 747 aa24.3■■□□□ 1.48
NFIC-208ENST00000589537 STK26Q9P289 416 aa24.3■■□□□ 1.48
NFIC-208ENST00000589537 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
NFIC-208ENST00000589537 TMEM132EQ6IEE7 984 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms