RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 NUTM2DQ5VT03 806 aaPredicted RBP29.58■■■□□ 2.33
LINC00654-202ENST00000589201 RAB3GAP2Q9H2M9 1393 aa29.58■■■□□ 2.33
LINC00654-202ENST00000589201 SENP3Q9H4L4 574 aaPredicted RBP29.58■■■□□ 2.33
LINC00654-202ENST00000589201 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
LINC00654-202ENST00000589201 BCANQ96GW7 911 aa29.57■■■□□ 2.32
LINC00654-202ENST00000589201 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
LINC00654-202ENST00000589201 CLTCL1P53675 1640 aa29.56■■■□□ 2.32
LINC00654-202ENST00000589201 IQSEC2Q5JU85 1478 aa29.56■■■□□ 2.32
LINC00654-202ENST00000589201 ACIN1Q9UKV3 1341 aaKnown RBP29.56■■■□□ 2.32
LINC00654-202ENST00000589201 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.56■■■□□ 2.32
LINC00654-202ENST00000589201 CPS1P31327 1500 aa29.55■■■□□ 2.32
LINC00654-202ENST00000589201 STRCP1A6NGW2 1772 aa29.53■■■□□ 2.32
LINC00654-202ENST00000589201 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
LINC00654-202ENST00000589201 ZNF326Q5BKZ1 582 aaKnown RBP29.52■■■□□ 2.32
LINC00654-202ENST00000589201 KIF1BO60333 1816 aa29.47■■■□□ 2.31
LINC00654-202ENST00000589201 UBAP1LF5GYI3 381 aa29.43■■■□□ 2.3
LINC00654-202ENST00000589201 KCNA6P17658 529 aa29.43■■■□□ 2.3
LINC00654-202ENST00000589201 HRCP23327 699 aa29.43■■■□□ 2.3
LINC00654-202ENST00000589201 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
LINC00654-202ENST00000589201 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
LINC00654-202ENST00000589201 ADAMTS13Q76LX8 1427 aa29.39■■■□□ 2.3
LINC00654-202ENST00000589201 CCDC144AA2RUR9 1427 aa29.38■■■□□ 2.29
LINC00654-202ENST00000589201 NEXMIFQ5QGS0 1516 aa29.38■■■□□ 2.29
LINC00654-202ENST00000589201 RPGRIP1LQ68CZ1 1315 aa29.33■■■□□ 2.29
LINC00654-202ENST00000589201 TOM1O60784 492 aa29.32■■■□□ 2.28
LINC00654-202ENST00000589201 PROSER2Q86WR7 435 aaPredicted RBP29.32■■■□□ 2.28
LINC00654-202ENST00000589201 CHD2O14647 1828 aaKnown RBP29.31■■■□□ 2.28
LINC00654-202ENST00000589201 RGL3Q3MIN7 710 aa29.31■■■□□ 2.28
LINC00654-202ENST00000589201 DIP2AQ14689 1571 aa29.3■■■□□ 2.28
LINC00654-202ENST00000589201 NWD1Q149M9 1564 aa29.3■■■□□ 2.28
LINC00654-202ENST00000589201 VGFO15240 615 aaPredicted RBP29.3■■■□□ 2.28
LINC00654-202ENST00000589201 RBM33Q96EV2 1170 aaKnown RBP29.3■■■□□ 2.28
LINC00654-202ENST00000589201 NRXN3Q9Y4C0 1643 aa29.3■■■□□ 2.28
LINC00654-202ENST00000589201 SETBP1Q9Y6X0 1596 aa29.3■■■□□ 2.28
LINC00654-202ENST00000589201 XIRP1Q702N8 1843 aaKnown RBP29.29■■■□□ 2.28
LINC00654-202ENST00000589201 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
LINC00654-202ENST00000589201 TMEM94Q12767 1356 aa29.28■■■□□ 2.28
LINC00654-202ENST00000589201 PIK3R4Q99570 1358 aa29.26■■■□□ 2.28
LINC00654-202ENST00000589201 NKTRP30414 1462 aaKnown RBP29.26■■■□□ 2.27
LINC00654-202ENST00000589201 PIP4K2BP78356 416 aa29.26■■■□□ 2.27
LINC00654-202ENST00000589201 ANKRD30BQ9BXX2 1392 aa29.25■■■□□ 2.27
LINC00654-202ENST00000589201 AMOTL2Q9Y2J4 779 aa29.24■■■□□ 2.27
LINC00654-202ENST00000589201 PPLO60437 1756 aa29.24■■■□□ 2.27
LINC00654-202ENST00000589201 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
LINC00654-202ENST00000589201 PTPRUQ92729 1446 aa29.23■■■□□ 2.27
LINC00654-202ENST00000589201 ALKQ9UM73 1620 aa29.23■■■□□ 2.27
LINC00654-202ENST00000589201 METP08581 1390 aa29.22■■■□□ 2.27
LINC00654-202ENST00000589201 ADGRF5Q8IZF2 1346 aa29.18■■■□□ 2.26
LINC00654-202ENST00000589201 IFT172Q9UG01 1749 aa29.13■■■□□ 2.25
LINC00654-202ENST00000589201 MSH6P52701 1360 aa29.11■■■□□ 2.25
LINC00654-202ENST00000589201 XRN1Q8IZH2 1706 aaKnown RBP29.11■■■□□ 2.25
LINC00654-202ENST00000589201 TRIM26Q12899 539 aaPredicted RBP29.1■■■□□ 2.25
LINC00654-202ENST00000589201 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
LINC00654-202ENST00000589201 SETD1AO15047 1707 aaKnown RBP29.1■■■□□ 2.25
LINC00654-202ENST00000589201 NCOA3Q9Y6Q9 1424 aa29.1■■■□□ 2.25
LINC00654-202ENST00000589201 HSPA1LP34931 641 aa29.08■■■□□ 2.25
LINC00654-202ENST00000589201 C19orf44Q9H6X5 657 aa29.05■■■□□ 2.24
LINC00654-202ENST00000589201 PIK3C2GO75747 1445 aa29.03■■■□□ 2.24
LINC00654-202ENST00000589201 SLAIN2Q9P270 581 aa29.02■■■□□ 2.24
LINC00654-202ENST00000589201 MYOM2P54296 1465 aa28.99■■■□□ 2.23
LINC00654-202ENST00000589201 TMEM132EQ6IEE7 984 aa28.99■■■□□ 2.23
LINC00654-202ENST00000589201 FAM135BQ49AJ0 1406 aa28.99■■■□□ 2.23
LINC00654-202ENST00000589201 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.99■■■□□ 2.23
LINC00654-202ENST00000589201 NRXN1Q9ULB1 1477 aa28.98■■■□□ 2.23
LINC00654-202ENST00000589201 ATF3P18847 181 aa28.98■■■□□ 2.23
LINC00654-202ENST00000589201 DCAF11Q8TEB1 546 aa28.98■■■□□ 2.23
LINC00654-202ENST00000589201 C14orf93Q9H972 538 aaKnown RBP28.98■■■□□ 2.23
LINC00654-202ENST00000589201 KDM2AQ9Y2K7 1162 aa28.98■■■□□ 2.23
LINC00654-202ENST00000589201 ROBO2Q9HCK4 1378 aa28.98■■■□□ 2.23
LINC00654-202ENST00000589201 CADPS2Q86UW7 1296 aa28.97■■■□□ 2.23
LINC00654-202ENST00000589201 CFAP70Q5T0N1 1121 aa28.96■■■□□ 2.23
LINC00654-202ENST00000589201 PTCH1Q13635 1447 aa28.95■■■□□ 2.23
LINC00654-202ENST00000589201 STK26Q9P289 416 aa28.95■■■□□ 2.22
LINC00654-202ENST00000589201 DHX57Q6P158 1386 aaKnown RBP28.94■■■□□ 2.22
LINC00654-202ENST00000589201 PRAG1Q86YV5 1406 aa28.94■■■□□ 2.22
LINC00654-202ENST00000589201 ASXL1Q8IXJ9 1541 aa28.93■■■□□ 2.22
LINC00654-202ENST00000589201 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
LINC00654-202ENST00000589201 LRPPRCP42704 1394 aaKnown RBP28.91■■■□□ 2.22
LINC00654-202ENST00000589201 STAC3Q96MF2 364 aa28.9■■■□□ 2.22
LINC00654-202ENST00000589201 ADGRL3Q9HAR2 1447 aa28.9■■■□□ 2.22
LINC00654-202ENST00000589201 ABCC11Q96J66 1382 aa28.88■■■□□ 2.21
LINC00654-202ENST00000589201 DCCP43146 1447 aa28.88■■■□□ 2.21
LINC00654-202ENST00000589201 YTHDC2Q9H6S0 1430 aaKnown RBP28.87■■■□□ 2.21
LINC00654-202ENST00000589201 NALCNQ8IZF0 1738 aa28.87■■■□□ 2.21
LINC00654-202ENST00000589201 WAPLQ7Z5K2 1190 aa28.86■■■□□ 2.21
LINC00654-202ENST00000589201 SIN3AQ96ST3 1273 aa28.86■■■□□ 2.21
LINC00654-202ENST00000589201 TECPR2O15040 1411 aa28.86■■■□□ 2.21
LINC00654-202ENST00000589201 LAMC1P11047 1609 aa28.84■■■□□ 2.21
LINC00654-202ENST00000589201 MST1RQ04912 1400 aa28.82■■■□□ 2.2
LINC00654-202ENST00000589201 PLEKHH1Q9ULM0 1364 aa28.8■■■□□ 2.2
LINC00654-202ENST00000589201 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
LINC00654-202ENST00000589201 KNDC1Q76NI1 1749 aa28.8■■■□□ 2.2
LINC00654-202ENST00000589201 NEUROD1Q13562 356 aa28.79■■■□□ 2.2
LINC00654-202ENST00000589201 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
LINC00654-202ENST00000589201 ADGRB1O14514 1584 aa28.76■■■□□ 2.19
LINC00654-202ENST00000589201 L3MBTL2Q969R5 705 aa28.75■■■□□ 2.19
LINC00654-202ENST00000589201 DISP3Q9P2K9 1392 aa28.75■■■□□ 2.19
LINC00654-202ENST00000589201 PHLPP1O60346 1717 aa28.74■■■□□ 2.19
LINC00654-202ENST00000589201 TRAK1Q9UPV9 953 aa28.73■■■□□ 2.19
LINC00654-202ENST00000589201 PRAM1Q96QH2 718 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms