RNA–Protein interactions for RNA: ENST00000588533.5

MARK4-204, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 2

Gene MARK4, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-204ENST00000588533 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
MARK4-204ENST00000588533 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
MARK4-204ENST00000588533 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
MARK4-204ENST00000588533 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
MARK4-204ENST00000588533 PPLO60437 1756 aa13.32□□□□□ -0.28
MARK4-204ENST00000588533 ZFYVE9O95405 1425 aa13.32□□□□□ -0.28
MARK4-204ENST00000588533 LTKP29376 864 aa13.31□□□□□ -0.28
MARK4-204ENST00000588533 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
MARK4-204ENST00000588533 CHD2O14647 1828 aaKnown RBP13.31□□□□□ -0.28
MARK4-204ENST00000588533 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
MARK4-204ENST00000588533 NEXMIFQ5QGS0 1516 aa13.29□□□□□ -0.28
MARK4-204ENST00000588533 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
MARK4-204ENST00000588533 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
MARK4-204ENST00000588533 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
MARK4-204ENST00000588533 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
MARK4-204ENST00000588533 IFT172Q9UG01 1749 aa13.28□□□□□ -0.28
MARK4-204ENST00000588533 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
MARK4-204ENST00000588533 LRRC7Q96NW7 1537 aa13.28□□□□□ -0.28
MARK4-204ENST00000588533 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
MARK4-204ENST00000588533 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.29
MARK4-204ENST00000588533 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
MARK4-204ENST00000588533 CCDC144AA2RUR9 1427 aa13.26□□□□□ -0.29
MARK4-204ENST00000588533 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
MARK4-204ENST00000588533 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
MARK4-204ENST00000588533 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
MARK4-204ENST00000588533 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
MARK4-204ENST00000588533 FOXD1Q16676 465 aa13.24□□□□□ -0.29
MARK4-204ENST00000588533 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
MARK4-204ENST00000588533 XRN1Q8IZH2 1706 aaKnown RBP13.24□□□□□ -0.29
MARK4-204ENST00000588533 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
MARK4-204ENST00000588533 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
MARK4-204ENST00000588533 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
MARK4-204ENST00000588533 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
MARK4-204ENST00000588533 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
MARK4-204ENST00000588533 TOM1O60784 492 aa13.19□□□□□ -0.3
MARK4-204ENST00000588533 MPHOSPH9Q99550 1183 aa13.19□□□□□ -0.3
MARK4-204ENST00000588533 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
MARK4-204ENST00000588533 LAMC1P11047 1609 aa13.18□□□□□ -0.3
MARK4-204ENST00000588533 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
MARK4-204ENST00000588533 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
MARK4-204ENST00000588533 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
MARK4-204ENST00000588533 ACIN1Q9UKV3 1341 aaKnown RBP13.16□□□□□ -0.3
MARK4-204ENST00000588533 KCNA6P17658 529 aa13.16□□□□□ -0.3
MARK4-204ENST00000588533 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
MARK4-204ENST00000588533 MSH6P52701 1360 aa13.16□□□□□ -0.3
MARK4-204ENST00000588533 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
MARK4-204ENST00000588533 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
MARK4-204ENST00000588533 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
MARK4-204ENST00000588533 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
MARK4-204ENST00000588533 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
MARK4-204ENST00000588533 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
MARK4-204ENST00000588533 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
MARK4-204ENST00000588533 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
MARK4-204ENST00000588533 MYOM2P54296 1465 aa13.1□□□□□ -0.31
MARK4-204ENST00000588533 METP08581 1390 aa13.09□□□□□ -0.31
MARK4-204ENST00000588533 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
MARK4-204ENST00000588533 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
MARK4-204ENST00000588533 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
MARK4-204ENST00000588533 ANKRD30BQ9BXX2 1392 aa13.08□□□□□ -0.31
MARK4-204ENST00000588533 HSPA1LP34931 641 aa13.08□□□□□ -0.32
MARK4-204ENST00000588533 AMOTL2Q9Y2J4 779 aa13.08□□□□□ -0.32
MARK4-204ENST00000588533 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
MARK4-204ENST00000588533 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
MARK4-204ENST00000588533 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
MARK4-204ENST00000588533 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
MARK4-204ENST00000588533 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
MARK4-204ENST00000588533 NHSL1Q5SYE7 1610 aa13.04□□□□□ -0.32
MARK4-204ENST00000588533 DCCP43146 1447 aa13.04□□□□□ -0.32
MARK4-204ENST00000588533 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
MARK4-204ENST00000588533 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
MARK4-204ENST00000588533 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
MARK4-204ENST00000588533 ATF3P18847 181 aa13.03□□□□□ -0.32
MARK4-204ENST00000588533 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.33
MARK4-204ENST00000588533 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.33
MARK4-204ENST00000588533 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.33
MARK4-204ENST00000588533 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
MARK4-204ENST00000588533 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
MARK4-204ENST00000588533 SHPRHQ149N8 1683 aa13□□□□□ -0.33
MARK4-204ENST00000588533 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
MARK4-204ENST00000588533 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
MARK4-204ENST00000588533 STK26Q9P289 416 aa13□□□□□ -0.33
MARK4-204ENST00000588533 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
MARK4-204ENST00000588533 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
MARK4-204ENST00000588533 MST1RQ04912 1400 aa12.99□□□□□ -0.33
MARK4-204ENST00000588533 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
MARK4-204ENST00000588533 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
MARK4-204ENST00000588533 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
MARK4-204ENST00000588533 HRCP23327 699 aa12.98□□□□□ -0.33
MARK4-204ENST00000588533 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
MARK4-204ENST00000588533 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
MARK4-204ENST00000588533 KDM2AQ9Y2K7 1162 aa12.98□□□□□ -0.33
MARK4-204ENST00000588533 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
MARK4-204ENST00000588533 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
MARK4-204ENST00000588533 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
MARK4-204ENST00000588533 TECPR2O15040 1411 aa12.96□□□□□ -0.33
MARK4-204ENST00000588533 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
MARK4-204ENST00000588533 DCAF11Q8TEB1 546 aa12.96□□□□□ -0.33
MARK4-204ENST00000588533 ITSN1Q15811 1721 aa12.96□□□□□ -0.34
MARK4-204ENST00000588533 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
MARK4-204ENST00000588533 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms