RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 MED14O60244 1454 aa17.42■□□□□ 0.38
SDHDP1-201ENST00000588055 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
SDHDP1-201ENST00000588055 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
SDHDP1-201ENST00000588055 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
SDHDP1-201ENST00000588055 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
SDHDP1-201ENST00000588055 BCANQ96GW7 911 aa17.36■□□□□ 0.37
SDHDP1-201ENST00000588055 ANKRD30BQ9BXX2 1392 aa17.36■□□□□ 0.37
SDHDP1-201ENST00000588055 LTKP29376 864 aa17.35■□□□□ 0.37
SDHDP1-201ENST00000588055 NEXMIFQ5QGS0 1516 aa17.35■□□□□ 0.37
SDHDP1-201ENST00000588055 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
SDHDP1-201ENST00000588055 PPLO60437 1756 aa17.33■□□□□ 0.36
SDHDP1-201ENST00000588055 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
SDHDP1-201ENST00000588055 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
SDHDP1-201ENST00000588055 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
SDHDP1-201ENST00000588055 DHX57Q6P158 1386 aaKnown RBP17.3■□□□□ 0.36
SDHDP1-201ENST00000588055 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
SDHDP1-201ENST00000588055 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
SDHDP1-201ENST00000588055 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
SDHDP1-201ENST00000588055 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
SDHDP1-201ENST00000588055 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
SDHDP1-201ENST00000588055 CPS1P31327 1500 aa17.26■□□□□ 0.35
SDHDP1-201ENST00000588055 ZNF335Q9H4Z2 1342 aaPredicted RBP17.26■□□□□ 0.35
SDHDP1-201ENST00000588055 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
SDHDP1-201ENST00000588055 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
SDHDP1-201ENST00000588055 MYOM2P54296 1465 aa17.24■□□□□ 0.35
SDHDP1-201ENST00000588055 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
SDHDP1-201ENST00000588055 ADAMTS13Q76LX8 1427 aa17.22■□□□□ 0.35
SDHDP1-201ENST00000588055 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
SDHDP1-201ENST00000588055 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
SDHDP1-201ENST00000588055 LAMC1P11047 1609 aa17.21■□□□□ 0.35
SDHDP1-201ENST00000588055 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
SDHDP1-201ENST00000588055 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
SDHDP1-201ENST00000588055 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
SDHDP1-201ENST00000588055 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
SDHDP1-201ENST00000588055 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
SDHDP1-201ENST00000588055 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
SDHDP1-201ENST00000588055 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
SDHDP1-201ENST00000588055 CHD2O14647 1828 aaKnown RBP17.18■□□□□ 0.34
SDHDP1-201ENST00000588055 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
SDHDP1-201ENST00000588055 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
SDHDP1-201ENST00000588055 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 KCNA6P17658 529 aa17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 NRXN1Q9ULB1 1477 aa17.16■□□□□ 0.34
SDHDP1-201ENST00000588055 XRN1Q8IZH2 1706 aaKnown RBP17.14■□□□□ 0.33
SDHDP1-201ENST00000588055 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
SDHDP1-201ENST00000588055 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
SDHDP1-201ENST00000588055 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
SDHDP1-201ENST00000588055 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
SDHDP1-201ENST00000588055 METP08581 1390 aa17.13■□□□□ 0.33
SDHDP1-201ENST00000588055 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
SDHDP1-201ENST00000588055 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
SDHDP1-201ENST00000588055 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
SDHDP1-201ENST00000588055 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
SDHDP1-201ENST00000588055 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
SDHDP1-201ENST00000588055 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
SDHDP1-201ENST00000588055 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
SDHDP1-201ENST00000588055 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
SDHDP1-201ENST00000588055 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
SDHDP1-201ENST00000588055 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
SDHDP1-201ENST00000588055 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
SDHDP1-201ENST00000588055 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
SDHDP1-201ENST00000588055 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
SDHDP1-201ENST00000588055 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
SDHDP1-201ENST00000588055 NCOA3Q9Y6Q9 1424 aa17.05■□□□□ 0.32
SDHDP1-201ENST00000588055 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
SDHDP1-201ENST00000588055 MSH6P52701 1360 aa17.05■□□□□ 0.32
SDHDP1-201ENST00000588055 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
SDHDP1-201ENST00000588055 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
SDHDP1-201ENST00000588055 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
SDHDP1-201ENST00000588055 TECPR2O15040 1411 aa17.03■□□□□ 0.32
SDHDP1-201ENST00000588055 ADGRB1O14514 1584 aa17.02■□□□□ 0.32
SDHDP1-201ENST00000588055 STK26Q9P289 416 aa17.02■□□□□ 0.32
SDHDP1-201ENST00000588055 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
SDHDP1-201ENST00000588055 TOM1O60784 492 aa17.01■□□□□ 0.31
SDHDP1-201ENST00000588055 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
SDHDP1-201ENST00000588055 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
SDHDP1-201ENST00000588055 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SDHDP1-201ENST00000588055 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
SDHDP1-201ENST00000588055 ABCC11Q96J66 1382 aa17■□□□□ 0.31
SDHDP1-201ENST00000588055 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
SDHDP1-201ENST00000588055 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
SDHDP1-201ENST00000588055 ADGRL3Q9HAR2 1447 aa16.99■□□□□ 0.31
SDHDP1-201ENST00000588055 DLC1Q96QB1 1528 aa16.99■□□□□ 0.31
SDHDP1-201ENST00000588055 DCCP43146 1447 aa16.98■□□□□ 0.31
SDHDP1-201ENST00000588055 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
SDHDP1-201ENST00000588055 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
SDHDP1-201ENST00000588055 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
SDHDP1-201ENST00000588055 ATF3P18847 181 aa16.97■□□□□ 0.31
SDHDP1-201ENST00000588055 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
SDHDP1-201ENST00000588055 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
SDHDP1-201ENST00000588055 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
SDHDP1-201ENST00000588055 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.3
SDHDP1-201ENST00000588055 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
SDHDP1-201ENST00000588055 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
SDHDP1-201ENST00000588055 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
SDHDP1-201ENST00000588055 POGKQ9P215 609 aa16.94■□□□□ 0.3
SDHDP1-201ENST00000588055 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms