RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
GRN-210ENST00000587958 BCANQ96GW7 911 aa22.47■■□□□ 1.19
GRN-210ENST00000587958 XIRP1Q702N8 1843 aaKnown RBP22.47■■□□□ 1.19
GRN-210ENST00000587958 RBM33Q96EV2 1170 aaKnown RBP22.45■■□□□ 1.18
GRN-210ENST00000587958 CPS1P31327 1500 aa22.45■■□□□ 1.18
GRN-210ENST00000587958 UBAP1LF5GYI3 381 aa22.44■■□□□ 1.18
GRN-210ENST00000587958 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
GRN-210ENST00000587958 KIF1BO60333 1816 aa22.43■■□□□ 1.18
GRN-210ENST00000587958 TRPM2O94759 1503 aa22.42■■□□□ 1.18
GRN-210ENST00000587958 IQSEC2Q5JU85 1478 aa22.42■■□□□ 1.18
GRN-210ENST00000587958 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
GRN-210ENST00000587958 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
GRN-210ENST00000587958 ALKQ9UM73 1620 aa22.4■■□□□ 1.18
GRN-210ENST00000587958 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
GRN-210ENST00000587958 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
GRN-210ENST00000587958 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
GRN-210ENST00000587958 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
GRN-210ENST00000587958 PIP4K2BP78356 416 aa22.37■■□□□ 1.17
GRN-210ENST00000587958 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
GRN-210ENST00000587958 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
GRN-210ENST00000587958 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
GRN-210ENST00000587958 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
GRN-210ENST00000587958 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
GRN-210ENST00000587958 KCNA6P17658 529 aa22.33■■□□□ 1.17
GRN-210ENST00000587958 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
GRN-210ENST00000587958 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
GRN-210ENST00000587958 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
GRN-210ENST00000587958 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
GRN-210ENST00000587958 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
GRN-210ENST00000587958 TBX22Q9Y458 520 aa22.28■■□□□ 1.16
GRN-210ENST00000587958 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
GRN-210ENST00000587958 PPLO60437 1756 aa22.27■■□□□ 1.16
GRN-210ENST00000587958 TOM1O60784 492 aa22.26■■□□□ 1.15
GRN-210ENST00000587958 RGL3Q3MIN7 710 aa22.26■■□□□ 1.15
GRN-210ENST00000587958 METP08581 1390 aa22.24■■□□□ 1.15
GRN-210ENST00000587958 SETBP1Q9Y6X0 1596 aa22.23■■□□□ 1.15
GRN-210ENST00000587958 HSPA1LP34931 641 aa22.22■■□□□ 1.15
GRN-210ENST00000587958 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
GRN-210ENST00000587958 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
GRN-210ENST00000587958 SETD1AO15047 1707 aaKnown RBP22.2■■□□□ 1.14
GRN-210ENST00000587958 AMOTL2Q9Y2J4 779 aa22.2■■□□□ 1.14
GRN-210ENST00000587958 NKTRP30414 1462 aaKnown RBP22.2■■□□□ 1.14
GRN-210ENST00000587958 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
GRN-210ENST00000587958 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
GRN-210ENST00000587958 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
GRN-210ENST00000587958 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
GRN-210ENST00000587958 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.13
GRN-210ENST00000587958 VGFO15240 615 aaPredicted RBP22.13■■□□□ 1.13
GRN-210ENST00000587958 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
GRN-210ENST00000587958 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
GRN-210ENST00000587958 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
GRN-210ENST00000587958 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
GRN-210ENST00000587958 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
GRN-210ENST00000587958 MSH6P52701 1360 aa22.1■■□□□ 1.13
GRN-210ENST00000587958 HRCP23327 699 aa22.07■■□□□ 1.12
GRN-210ENST00000587958 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
GRN-210ENST00000587958 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
GRN-210ENST00000587958 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
GRN-210ENST00000587958 ASXL1Q8IXJ9 1541 aa22.05■■□□□ 1.12
GRN-210ENST00000587958 ROBO2Q9HCK4 1378 aa22.04■■□□□ 1.12
GRN-210ENST00000587958 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
GRN-210ENST00000587958 STK26Q9P289 416 aa22.02■■□□□ 1.12
GRN-210ENST00000587958 DISP3Q9P2K9 1392 aa22.01■■□□□ 1.11
GRN-210ENST00000587958 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
GRN-210ENST00000587958 C19orf44Q9H6X5 657 aa22.01■■□□□ 1.11
GRN-210ENST00000587958 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
GRN-210ENST00000587958 PIK3C2GO75747 1445 aa22■■□□□ 1.11
GRN-210ENST00000587958 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
GRN-210ENST00000587958 NCOA3Q9Y6Q9 1424 aa21.98■■□□□ 1.11
GRN-210ENST00000587958 ATF3P18847 181 aa21.97■■□□□ 1.11
GRN-210ENST00000587958 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
GRN-210ENST00000587958 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
GRN-210ENST00000587958 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
GRN-210ENST00000587958 ILDR2Q71H61 639 aa21.95■■□□□ 1.1
GRN-210ENST00000587958 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
GRN-210ENST00000587958 PLEKHH1Q9ULM0 1364 aa21.95■■□□□ 1.1
GRN-210ENST00000587958 NRXN1Q9ULB1 1477 aa21.95■■□□□ 1.1
GRN-210ENST00000587958 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
GRN-210ENST00000587958 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
GRN-210ENST00000587958 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
GRN-210ENST00000587958 MYOM2P54296 1465 aa21.93■■□□□ 1.1
GRN-210ENST00000587958 DDX17Q92841 729 aaKnown RBP21.93■■□□□ 1.1
GRN-210ENST00000587958 C14orf93Q9H972 538 aaKnown RBP21.93■■□□□ 1.1
GRN-210ENST00000587958 MST1RQ04912 1400 aa21.92■■□□□ 1.1
GRN-210ENST00000587958 PTCH1Q13635 1447 aa21.92■■□□□ 1.1
GRN-210ENST00000587958 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
GRN-210ENST00000587958 SIN3AQ96ST3 1273 aa21.9■■□□□ 1.1
GRN-210ENST00000587958 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.1
GRN-210ENST00000587958 KNDC1Q76NI1 1749 aa21.89■■□□□ 1.1
GRN-210ENST00000587958 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
GRN-210ENST00000587958 COL16A1Q07092 1604 aaPredicted RBP21.89■■□□□ 1.09
GRN-210ENST00000587958 NUTM2FA1L443 756 aa21.87■■□□□ 1.09
GRN-210ENST00000587958 DCCP43146 1447 aa21.87■■□□□ 1.09
GRN-210ENST00000587958 PRAG1Q86YV5 1406 aa21.87■■□□□ 1.09
GRN-210ENST00000587958 ORAI2Q96SN7 254 aa21.86■■□□□ 1.09
GRN-210ENST00000587958 LAMC1P11047 1609 aa21.85■■□□□ 1.09
GRN-210ENST00000587958 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
GRN-210ENST00000587958 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.09
GRN-210ENST00000587958 TECPR2O15040 1411 aa21.85■■□□□ 1.09
GRN-210ENST00000587958 ABCC11Q96J66 1382 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms